RNA–Protein interactions for RNA: ENST00000306014.9

DDX54-201, Transcript of DEAD-box helicase 54, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDX54, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-201ENST00000306014 SCN7AQ01118 1682 aa13.1□□□□□ -0.31
DDX54-201ENST00000306014 GLYATL1P3A0A0U1RQE8 302 aa13.1□□□□□ -0.31
DDX54-201ENST00000306014 FPGTO14772 594 aa13.1□□□□□ -0.31
DDX54-201ENST00000306014 PENKP01210 267 aaPredicted RBP13.1□□□□□ -0.31
DDX54-201ENST00000306014 FABP3P05413 133 aa13.1□□□□□ -0.31
DDX54-201ENST00000306014 MYL12AP19105 171 aa13.1□□□□□ -0.31
DDX54-201ENST00000306014 PTGER3P43115 390 aa13.1□□□□□ -0.31
DDX54-201ENST00000306014 CTSKP43235 329 aa13.1□□□□□ -0.31
DDX54-201ENST00000306014 TAF1AQ15573 450 aaPredicted RBP13.1□□□□□ -0.31
DDX54-201ENST00000306014 POM121L1PQ3SYA9 428 aa13.1□□□□□ -0.31
DDX54-201ENST00000306014 UNC50Q53HI1 259 aa13.1□□□□□ -0.31
DDX54-201ENST00000306014 NANOGP8Q6NSW7 305 aa13.1□□□□□ -0.31
DDX54-201ENST00000306014 DOK6Q6PKX4 331 aa13.1□□□□□ -0.31
DDX54-201ENST00000306014 RNF19BQ6ZMZ0 732 aa13.1□□□□□ -0.31
DDX54-201ENST00000306014 EEF1AKMT1Q8WVE0 214 aa13.1□□□□□ -0.31
DDX54-201ENST00000306014 FAR1Q8WVX9 515 aa13.1□□□□□ -0.31
DDX54-201ENST00000306014 TSGA13Q96PP4 275 aa13.1□□□□□ -0.31
DDX54-201ENST00000306014 EBPLQ9BY08 206 aa13.1□□□□□ -0.31
DDX54-201ENST00000306014 NANOGQ9H9S0 305 aa13.1□□□□□ -0.31
DDX54-201ENST00000306014 GIN1Q9NXP7 522 aa13.1□□□□□ -0.31
DDX54-201ENST00000306014 MARCH4Q9P2E8 410 aaPredicted RBP13.1□□□□□ -0.31
DDX54-201ENST00000306014 FAM25AB3EWG3 89 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 FAM25CB3EWG5 89 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 FAM25GB3EWG6 89 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 FFAR2O15552 330 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 IDH3BO43837 385 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 AIREO43918 545 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 TRBC1P01850 177 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 IL6P05231 212 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 TSPAN19P0C672 248 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 EPORP19235 508 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 PPP2R1BP30154 601 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 LEPRP48357 1165 aaKnown RBP13.09□□□□□ -0.31
DDX54-201ENST00000306014 ARSFP54793 590 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 TPTEP56180 551 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 FOXM1Q08050 763 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 TP53BP2Q13625 1128 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 VARS2Q5ST30 1063 aaKnown RBP13.09□□□□□ -0.31
DDX54-201ENST00000306014 KLHL35Q6PF15 583 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 SLC45A3Q96JT2 553 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 CHCHD6Q9BRQ6 235 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 YTHDF1Q9BYJ9 559 aaKnown RBP13.09□□□□□ -0.31
DDX54-201ENST00000306014 SMOC2Q9H3U7 446 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 NMUR1Q9HB89 426 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 CLN6Q9NWW5 311 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 UBAP1Q9NZ09 502 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 ZIM2Q9NZV7 527 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 OR6C75A6NL08 312 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 CA12O43570 354 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 PGLSO95336 258 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 SYT16Q17RD7 645 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 ZNF789Q5FWF6 425 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 NANOGNBQ7Z5D8 188 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 R3HCC1LQ7Z5L2 792 aaKnown RBP13.09□□□□□ -0.31
DDX54-201ENST00000306014 PHC3Q8NDX5 983 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 KIAA1191Q96A73 305 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 NACC2Q96BF6 587 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 C1orf109Q9NX04 203 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 GTF2IRD1Q9UHL9 959 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 ERGIC3Q9Y282 383 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 DNAJC15Q9Y5T4 150 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 TBX1O43435 398 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 TFAP2AP05549 437 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 ALDH3A2P51648 485 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 STC1P52823 247 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 RPS7P62081 194 aaKnown RBP13.09□□□□□ -0.31
DDX54-201ENST00000306014 RPS14P62263 151 aaKnown RBP13.09□□□□□ -0.31
DDX54-201ENST00000306014 SNRPD1P62314 119 aaKnown RBP13.09□□□□□ -0.31
DDX54-201ENST00000306014 SEMG2Q02383 582 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 MAVSQ7Z434 540 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 OR5K1Q8NHB7 308 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 TOR3AQ9H497 397 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 CRNNQ9UBG3 495 aaPredicted RBP13.09□□□□□ -0.31
DDX54-201ENST00000306014 FCF1Q9Y324 198 aaKnown RBP13.09□□□□□ -0.31
DDX54-201ENST00000306014 HMX2A2RU54 273 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 LOC110117498-PIK3R3F6TDL0 507 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 PQBP1O60828 265 aaKnown RBP13.09□□□□□ -0.31
DDX54-201ENST00000306014 VARSP26640 1264 aaKnown RBP13.09□□□□□ -0.31
DDX54-201ENST00000306014 ARSDP51689 593 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 MOGQ16653 247 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 ALFQ53S48 1182 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 GPR153Q6NV75 609 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 TRAPPC5Q8IUR0 188 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 RAPGEFL1Q9UHV5 662 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 RAB23Q9ULC3 237 aa13.09□□□□□ -0.31
DDX54-201ENST00000306014 A0A0J9YVX5 310 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 BOLA2-SMG1P6H3BVE0 249 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 MAFKO60675 156 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 SLC6A2P23975 617 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 GDF5P43026 501 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 CDKN2DP55273 166 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 ACOX1Q15067 660 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 RBM48Q5RL73 367 aaKnown RBP13.08□□□□□ -0.32
DDX54-201ENST00000306014 CPTPQ5TA50 214 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 ZNF773Q6PK81 442 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 CENPSQ8N2Z9 138 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 TBC1D19Q8N5T2 526 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 SHKBP1Q8TBC3 707 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 FNDC8Q8TC99 324 aa13.08□□□□□ -0.32
DDX54-201ENST00000306014 POP5Q969H6 163 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms