RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 SLC16A5O15375 505 aa16.06■□□□□ 0.16
TPM1-201ENST00000267996 PLRG1O43660 514 aaKnown RBP16.06■□□□□ 0.16
TPM1-201ENST00000267996 C8GP07360 202 aa16.06■□□□□ 0.16
TPM1-201ENST00000267996 ENO2P09104 434 aaPredicted RBP16.06■□□□□ 0.16
TPM1-201ENST00000267996 VCLP18206 1134 aa16.06■□□□□ 0.16
TPM1-201ENST00000267996 TSPAN8P19075 237 aa16.06■□□□□ 0.16
TPM1-201ENST00000267996 CCINQ13939 588 aa16.06■□□□□ 0.16
TPM1-201ENST00000267996 SKIV2LQ15477 1246 aaKnown RBP16.06■□□□□ 0.16
TPM1-201ENST00000267996 WSCD2Q2TBF2 565 aa16.06■□□□□ 0.16
TPM1-201ENST00000267996 UGT3A2Q3SY77 523 aa16.06■□□□□ 0.16
TPM1-201ENST00000267996 SULT1C3Q6IMI6 304 aa16.06■□□□□ 0.16
TPM1-201ENST00000267996 PNCKQ6P2M8 343 aa16.06■□□□□ 0.16
TPM1-201ENST00000267996 TMEM220Q6QAJ8 160 aa16.06■□□□□ 0.16
TPM1-201ENST00000267996 CLYBLQ8N0X4 340 aa16.06■□□□□ 0.16
TPM1-201ENST00000267996 AGAP11Q8TF27 550 aa16.06■□□□□ 0.16
TPM1-201ENST00000267996 UBTD2Q8WUN7 234 aa16.06■□□□□ 0.16
TPM1-201ENST00000267996 CDX2Q99626 313 aaPredicted RBP16.06■□□□□ 0.16
TPM1-201ENST00000267996 CCDC106Q9BWC9 280 aa16.06■□□□□ 0.16
TPM1-201ENST00000267996 SLC12A9Q9BXP2 914 aa16.06■□□□□ 0.16
TPM1-201ENST00000267996 TCF7L2Q9NQB0 619 aa16.06■□□□□ 0.16
TPM1-201ENST00000267996 ARL8BQ9NVJ2 186 aa16.06■□□□□ 0.16
TPM1-201ENST00000267996 ZFR2Q9UPR6 939 aaKnown RBP16.06■□□□□ 0.16
TPM1-201ENST00000267996 ASB1Q9Y576 335 aa16.06■□□□□ 0.16
TPM1-201ENST00000267996 SLC5A10A0PJK1 596 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 SDHDO14521 159 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 TAPBPO15533 448 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 VEGFDO43915 354 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 PCDH8O95206 1070 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 MLYCDO95822 493 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 DNTTP04053 509 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 S100BP04271 92 aaPredicted RBP16.05■□□□□ 0.16
TPM1-201ENST00000267996 SRFP11831 508 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 CDKL1Q00532 357 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 BTKQ06187 659 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 SP140Q13342 867 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 BOP1Q14137 746 aaKnown RBP16.05■□□□□ 0.16
TPM1-201ENST00000267996 TBCCQ15814 346 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 LEXMQ3ZCV2 418 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 METTL2BQ6P1Q9 378 aaKnown RBP16.05■□□□□ 0.16
TPM1-201ENST00000267996 TRIM74Q86UV6 250 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 TREML1Q86YW5 311 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 PLA2G15Q8NCC3 412 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 TRPC4APQ8TEL6 797 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 GLMNQ92990 594 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 HLA-CQ95604 372 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 RHBDF1Q96CC6 855 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 PTCD3Q96EY7 689 aaKnown RBP16.05■□□□□ 0.16
TPM1-201ENST00000267996 HIC2Q96JB3 615 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 ZNF514Q96K75 400 aaPredicted RBP16.05■□□□□ 0.16
TPM1-201ENST00000267996 LINC00615Q96LM1 132 aaPredicted RBP16.05■□□□□ 0.16
TPM1-201ENST00000267996 C1QTNF2Q9BXJ5 285 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 WDR55Q9H6Y2 383 aaPredicted RBP16.05■□□□□ 0.16
TPM1-201ENST00000267996 MEAF6Q9HAF1 191 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 ARMCX1Q9P291 453 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 GULP1Q9UBP9 304 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 EIF2B4Q9UI10 523 aaKnown RBP16.05■□□□□ 0.16
TPM1-201ENST00000267996 TMEM202A6NGA9 273 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 CBX6O95503 412 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 GSTM1P09488 218 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 TARSP26639 723 aaKnown RBP16.05■□□□□ 0.16
TPM1-201ENST00000267996 RPS21P63220 83 aaKnown RBP16.05■□□□□ 0.16
TPM1-201ENST00000267996 GSTM4Q03013 218 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 TDGQ13569 410 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 FGL2Q14314 439 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 PDCD2Q16342 344 aaPredicted RBP16.05■□□□□ 0.16
TPM1-201ENST00000267996 LSM12Q3MHD2 195 aaKnown RBP16.05■□□□□ 0.16
TPM1-201ENST00000267996 TMEM259Q4ZIN3 620 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 SLC44A4Q53GD3 710 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 FBXO48Q5FWF7 155 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 EOGTQ5NDL2 527 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 ACAD11Q709F0 780 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 ASRGL1Q7L266 308 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 OR56A4Q8NGH8 313 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 FAM3CQ92520 227 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 NSL1Q96IY1 281 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 HGH1Q9BTY7 390 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 SLC6A17Q9H1V8 727 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 OR2AG1Q9H205 316 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 PARVBQ9HBI1 364 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 MID1IP1Q9NPA3 183 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 ATXN10Q9UBB4 475 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 LNPEPQ9UIQ6 1025 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 FZD4Q9ULV1 537 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 PDE10AQ9Y233 779 aa16.05■□□□□ 0.16
TPM1-201ENST00000267996 AZIN1O14977 448 aa16.04■□□□□ 0.16
TPM1-201ENST00000267996 HNRNPCL1O60812 293 aaKnown RBP16.04■□□□□ 0.16
TPM1-201ENST00000267996 MATN4O95460 622 aa16.04■□□□□ 0.16
TPM1-201ENST00000267996 AOC1P19801 751 aa16.04■□□□□ 0.16
TPM1-201ENST00000267996 EPHA3P29320 983 aa16.04■□□□□ 0.16
TPM1-201ENST00000267996 MLLT1Q03111 559 aaPredicted RBP16.04■□□□□ 0.16
TPM1-201ENST00000267996 MAP7D1Q3KQU3 841 aa16.04■□□□□ 0.16
TPM1-201ENST00000267996 KANK2Q63ZY3 851 aa16.04■□□□□ 0.16
TPM1-201ENST00000267996 KIAA1161Q6NSJ0 714 aa16.04■□□□□ 0.16
TPM1-201ENST00000267996 TTC23LQ6PF05 361 aa16.04■□□□□ 0.16
TPM1-201ENST00000267996 USP30Q70CQ3 517 aa16.04■□□□□ 0.16
TPM1-201ENST00000267996 UBE2R2Q712K3 238 aaPredicted RBP16.04■□□□□ 0.16
TPM1-201ENST00000267996 ACTRT2Q8TDY3 377 aa16.04■□□□□ 0.16
TPM1-201ENST00000267996 ESAMQ96AP7 390 aa16.04■□□□□ 0.16
TPM1-201ENST00000267996 SLC7A6OSQ96CW6 309 aaPredicted RBP16.04■□□□□ 0.16
TPM1-201ENST00000267996 ZNF382Q96SR6 550 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms