RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 GDPD4Q6W3E5 623 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 NAPRTQ6XQN6 538 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 CACTIN-AS1Q8N1I8 211 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 SLC43A3Q8NBI5 491 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 C11orf65Q8NCR3 313 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 ANKRD49Q8WVL7 239 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 GORASP1Q9BQQ3 440 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 ADI1Q9BV57 179 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 LMAN2LQ9H0V9 348 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 EPB41L1Q9H4G0 881 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 CCNB1IP1Q9NPC3 277 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 ARHGEF3Q9NR81 526 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 GCNT6Q5T4J0 391 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 PRR23CQ6ZRP0 262 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 COMMD2Q86X83 199 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 TEX47Q8TBZ9 253 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 TRIB2Q92519 343 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 ZNF317Q96PQ6 595 aaPredicted RBP13.8□□□□□ -0.2
CDH3-201ENST00000264012 GPR22Q99680 433 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 MAP4K5Q9Y4K4 846 aa13.8□□□□□ -0.2
CDH3-201ENST00000264012 CCDC85CA6NKD9 419 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 ANKRD66B4E2M5 251 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 SLC22A2O15244 555 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 HLA-DQA2P01906 255 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 PCSK2P16519 638 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 RPS14P62263 151 aaKnown RBP13.79□□□□□ -0.2
CDH3-201ENST00000264012 SLC18A2Q05940 514 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 ZNF57Q68EA5 555 aaPredicted RBP13.79□□□□□ -0.2
CDH3-201ENST00000264012 RNF19BQ6ZMZ0 732 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 SAPCD2Q86UD0 394 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 KBTBD2Q8IY47 623 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 CMTM8Q8IZV2 173 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 SMG8Q8ND04 991 aaKnown RBP13.79□□□□□ -0.2
CDH3-201ENST00000264012 OR10A6Q8NH74 314 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 VANGL1Q8TAA9 524 aaPredicted RBP13.79□□□□□ -0.2
CDH3-201ENST00000264012 FAM81AQ8TBF8 368 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 WDR60Q8WVS4 1066 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 ZDHHC3Q9NYG2 299 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 CHURC1-FNTBB4DL54 471 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 WNT9AO14904 365 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 OR1F1O43749 312 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 DLX3O60479 287 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 MAT2AP31153 395 aaKnown RBP13.79□□□□□ -0.2
CDH3-201ENST00000264012 TAS2R41P59536 307 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 PITRM1Q5JRX3 1037 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 GALNT18Q6P9A2 607 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 SLC13A3Q8WWT9 602 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 TMEM248Q9NWD8 314 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 MAT2BQ9NZL9 334 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 A0A1B0GW55 424 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 RBM47A0AV96 593 aaKnown RBP13.79□□□□□ -0.2
CDH3-201ENST00000264012 ECI2O75521 394 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 UGT2B17O75795 530 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 SCELO95171 688 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 DUX4L2P0CJ85 424 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 DUX4L3P0CJ86 424 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 DUX4L4P0CJ87 422 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 DUX4L5P0CJ88 424 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 DUX4L6P0CJ89 424 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 DUX4L7P0CJ90 424 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 GATMP50440 423 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 SERINC3Q13530 473 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 ATP13A5Q4VNC0 1218 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 ARSIQ5FYB1 569 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 RBM20Q5T481 1227 aaKnown RBP13.79□□□□□ -0.2
CDH3-201ENST00000264012 CBR4Q8N4T8 237 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 LEMD2Q8NC56 503 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 GLB1L3Q8NCI6 653 aaPredicted RBP13.79□□□□□ -0.2
CDH3-201ENST00000264012 LCN9Q8WX39 176 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 TOR4AQ9NXH8 423 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 PDP1Q9P0J1 537 aaPredicted RBP13.79□□□□□ -0.2
CDH3-201ENST00000264012 GULP1Q9UBP9 304 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 DUX4Q9UBX2 424 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 DNAJB4Q9UDY4 337 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 AK5Q9Y6K8 562 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 LRRC72A6NJI9 287 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 GTPBP1O00178 669 aaKnown RBP13.79□□□□□ -0.2
CDH3-201ENST00000264012 CMPK1P30085 196 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 PITX1P78337 314 aaPredicted RBP13.79□□□□□ -0.2
CDH3-201ENST00000264012 SIM2Q14190 667 aaPredicted RBP13.79□□□□□ -0.2
CDH3-201ENST00000264012 CHRNA6Q15825 494 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 IGDCC3Q8IVU1 814 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 ZNF514Q96K75 400 aaPredicted RBP13.79□□□□□ -0.2
CDH3-201ENST00000264012 STRA6Q9BX79 667 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 ZNF395Q9H8N7 513 aaPredicted RBP13.79□□□□□ -0.2
CDH3-201ENST00000264012 RSL24D1Q9UHA3 163 aaKnown RBP13.79□□□□□ -0.2
CDH3-201ENST00000264012 KCTD3Q9Y597 815 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 N6AMT1Q9Y5N5 214 aa13.79□□□□□ -0.2
CDH3-201ENST00000264012 H0YGN5 161 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 KERAO60938 352 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 GPR32O75388 356 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 CDK9P50750 372 aaKnown RBP13.78□□□□□ -0.2
CDH3-201ENST00000264012 COX10Q12887 443 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 PTCHD4Q6ZW05 846 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 GALNT5Q7Z7M9 940 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 DGCR14Q96DF8 476 aaKnown RBP13.78□□□□□ -0.2
CDH3-201ENST00000264012 CENPNQ96H22 339 aaPredicted RBP13.78□□□□□ -0.2
CDH3-201ENST00000264012 RIPOR3Q96MK2 946 aa13.78□□□□□ -0.2
CDH3-201ENST00000264012 MTERF1Q99551 399 aaKnown RBP13.78□□□□□ -0.2
CDH3-201ENST00000264012 CYTH4Q9UIA0 394 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms