RNA–Protein interactions for RNA: ENST00000258349.8

RC3H1-201, Transcript of ring finger and CCCH-type domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RC3H1, Length 10,988 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-201ENST00000258349 CPNE9Q8IYJ1 553 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 SPOCK2Q92563 424 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 PURBQ96QR8 312 aaKnown RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 HTATIP2Q9BUP3 242 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 KIAA1522Q9P206 1035 aaPredicted RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 ZNF282Q9UDV7 671 aaPredicted RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 PCDHGC3Q9UN70 934 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 HEATR5BQ9P2D3 2071 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 FAM234BA2RU67 622 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 E9PAM4 449 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 CLUP10909 449 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 AMD1P17707 334 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 KCNA5P22460 613 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 DNAJB1P25685 340 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 STOMP27105 288 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 PBX1P40424 430 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 SSR2P43308 183 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 ZNF155Q12901 538 aaPredicted RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 CPSF6Q16630 551 aaKnown RBP eCLIP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 XKR4Q5GH76 650 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 ZNF613Q6PF04 617 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 DEFB128Q7Z7B8 93 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 MPP5Q8N3R9 675 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 GALNT15Q8N3T1 639 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 FITM2Q8N6M3 262 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 ZNF433Q8N7K0 673 aaPredicted RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 CPNE2Q96FN4 548 aaPredicted RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 FAXDC2Q96IV6 333 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 KLHL5Q96PQ7 755 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 GBA2Q9HCG7 927 aaPredicted RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 FBXL21Q9UKT6 434 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 TCAF1Q9Y4C2 921 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 FER1L5A0AVI2 2057 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 TBC1D3BA6NDS4 549 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 OR2AT4A6NND4 320 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 CXCR6O00574 342 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 IST1P53990 364 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 TUBB3Q13509 450 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 DPY19L1Q2PZI1 675 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 XKRXQ6PP77 449 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 LINGO2Q7L985 606 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 IQCF2Q8IXL9 164 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 LRRC57Q8N9N7 239 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 ATAD1Q8NBU5 361 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 ELMO3Q96BJ8 720 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 MCMBPQ9BTE3 642 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 RSPH9Q9H1X1 276 aaPredicted RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 EXO5Q9H790 373 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 KAT8Q9H7Z6 458 aaKnown RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 ABCG2Q9UNQ0 655 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 PCDHGA3Q9Y5H0 932 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 A0A0U1RQJ8 604 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 KCNU1A8MYU2 1149 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 MSCO60682 206 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 CLDN11O75508 207 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 PRAMEF1O95521 474 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 SLC5A3P53794 718 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 WNT3AP56704 352 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 RGS8P57771 180 aaPredicted RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 RASGEF1BQ0VAM2 473 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 BTG3Q14201 252 aaPredicted RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 NOMO1Q15155 1222 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 ABCA11PQ4W5N1 156 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 TEX44Q53QW1 395 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 RAP1GAP2Q684P5 730 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 LRRC69Q6ZNQ3 347 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 SYVN1Q86TM6 617 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 MON1AQ86VX9 555 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 BANPQ8N9N5 519 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 OR5K1Q8NHB7 308 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 C9orf43Q8TAL5 461 aaPredicted RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 GEMIN6Q8WXD5 167 aaKnown RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 SMG7Q92540 1137 aaKnown RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 CREB3L1Q96BA8 519 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 KCTD7Q96MP8 289 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 GAD1Q99259 594 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 MRPL45Q9BRJ2 306 aaKnown RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 LRRC3Q9BY71 257 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 YDJCA8MPS7 323 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 TP73O15350 636 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 C22orf31O95567 290 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 SLC2A2P11168 524 aaPredicted RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 TSPAN8P19075 237 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 PDX1P52945 283 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 MAPK12P53778 367 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 SRSF11Q05519 484 aaKnown RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 CBLBQ13191 982 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 ZMYND11Q15326 602 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 LDLRAP1Q5SW96 308 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 RNASEH2BQ5TBB1 312 aaKnown RBP4.74□□□□□ -1.65
RC3H1-201ENST00000258349 VWA5B1Q5TIE3 1220 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 FAAH2Q6GMR7 532 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 FSTL4Q6MZW2 842 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 ASB9Q96DX5 294 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 CLIP3Q96DZ5 547 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 KAZALD1Q96I82 304 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 CAMK1GQ96NX5 476 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 CSPG4P5Q96PW8 444 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 COPS8Q99627 209 aa4.74□□□□□ -1.65
RC3H1-201ENST00000258349 TPK1Q9H3S4 243 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms