RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 UGT2A3Q6UWM9 527 aa15.51■□□□□ 0.07
LRFN1-201ENST00000248668 RALGPS2Q86X27 583 aaPredicted RBP15.51■□□□□ 0.07
LRFN1-201ENST00000248668 OR2AP1Q8NGE2 309 aa15.51■□□□□ 0.07
LRFN1-201ENST00000248668 ROPN1LQ96C74 230 aa15.51■□□□□ 0.07
LRFN1-201ENST00000248668 MRGBPQ9NV56 204 aa15.51■□□□□ 0.07
LRFN1-201ENST00000248668 DDX18Q9NVP1 670 aaKnown RBP15.51■□□□□ 0.07
LRFN1-201ENST00000248668 KIAA1522Q9P206 1035 aaPredicted RBP15.51■□□□□ 0.07
LRFN1-201ENST00000248668 TRAV19A0A0A6YYK7 116 aa15.51■□□□□ 0.07
LRFN1-201ENST00000248668 C7orf72A4D263 438 aa15.51■□□□□ 0.07
LRFN1-201ENST00000248668 GFRA2O00451 464 aa15.51■□□□□ 0.07
LRFN1-201ENST00000248668 C8BP07358 591 aa15.51■□□□□ 0.07
LRFN1-201ENST00000248668 G6PDP11413 515 aa15.51■□□□□ 0.07
LRFN1-201ENST00000248668 PSMA3P25788 255 aa15.51■□□□□ 0.07
LRFN1-201ENST00000248668 SERPINA4P29622 427 aa15.51■□□□□ 0.07
LRFN1-201ENST00000248668 HMOX2P30519 316 aa15.51■□□□□ 0.07
LRFN1-201ENST00000248668 OXTRP30559 389 aa15.51■□□□□ 0.07
LRFN1-201ENST00000248668 ASTLQ6HA08 431 aaPredicted RBP15.51■□□□□ 0.07
LRFN1-201ENST00000248668 HMBOX1Q6NT76 420 aa15.51■□□□□ 0.07
LRFN1-201ENST00000248668 C8orf82Q6P1X6 216 aaPredicted RBP15.51■□□□□ 0.07
LRFN1-201ENST00000248668 Q6ZVU0 165 aa15.51■□□□□ 0.07
LRFN1-201ENST00000248668 MILR1Q7Z6M3 343 aa15.51■□□□□ 0.07
LRFN1-201ENST00000248668 ADAMTSL2Q86TH1 951 aa15.51■□□□□ 0.07
LRFN1-201ENST00000248668 TMC8Q8IU68 726 aa15.51■□□□□ 0.07
LRFN1-201ENST00000248668 ADCY4Q8NFM4 1077 aa15.51■□□□□ 0.07
LRFN1-201ENST00000248668 SORCS1Q8WY21 1168 aa15.51■□□□□ 0.07
LRFN1-201ENST00000248668 PAWRQ96IZ0 340 aaKnown RBP15.51■□□□□ 0.07
LRFN1-201ENST00000248668 RC3H2Q9HBD1 1191 aaKnown RBP15.51■□□□□ 0.07
LRFN1-201ENST00000248668 ZFP14Q9HCL3 533 aa15.51■□□□□ 0.07
LRFN1-201ENST00000248668 MRPL40Q9NQ50 206 aaKnown RBP15.51■□□□□ 0.07
LRFN1-201ENST00000248668 SUN2Q9UH99 717 aa15.51■□□□□ 0.07
LRFN1-201ENST00000248668 GNPTGQ9UJJ9 305 aa15.51■□□□□ 0.07
LRFN1-201ENST00000248668 HSPA8P11142 646 aaKnown RBP15.5■□□□□ 0.07
LRFN1-201ENST00000248668 ACRV1P26436 265 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 LRRC26Q2I0M4 334 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 MPPE1Q53F39 396 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 XKR7Q5GH72 579 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 CRTC1Q6UUV9 634 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 DPY19L3Q6ZPD9 716 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 SATL1Q86VE3 508 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 CHST14Q8NCH0 376 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 ACDQ96AP0 544 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 PBXIP1Q96AQ6 731 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 PPM1MQ96MI6 270 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 BTBD9Q96Q07 612 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 GPATCH1Q9BRR8 931 aaKnown RBP15.5■□□□□ 0.07
LRFN1-201ENST00000248668 MTG2Q9H4K7 406 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 NUDT4Q9NZJ9 180 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 TMCO1Q9UM00 188 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 TANC1Q9C0D5 1861 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 TRIM43BA6NCK2 446 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 PDLIM1O00151 329 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 RAD51BO15315 384 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 INPP4BO15327 924 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 TAPBPO15533 448 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 PARNO95453 639 aaKnown RBP15.5■□□□□ 0.07
LRFN1-201ENST00000248668 POLR2JP52435 117 aaKnown RBP15.5■□□□□ 0.07
LRFN1-201ENST00000248668 ATP13A5Q4VNC0 1218 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 RFTN2Q52LD8 501 aaPredicted RBP15.5■□□□□ 0.07
LRFN1-201ENST00000248668 TICAM1Q8IUC6 712 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 KREMEN2Q8NCW0 462 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 OR2T34Q8NGX1 318 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 OR2T3Q8NH03 318 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 TRIM43Q96BQ3 446 aaPredicted RBP15.5■□□□□ 0.07
LRFN1-201ENST00000248668 LINC00597Q9H2U6 94 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 GID8Q9NWU2 228 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 KLQ9UEF7 1012 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 PCDHB1Q9Y5F3 818 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 ABHD14A-ACY1A0A1B0GW23 586 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 BBIP1A8MTZ0 92 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 HTRA2O43464 458 aaPredicted RBP15.5■□□□□ 0.07
LRFN1-201ENST00000248668 SPAM1P38567 509 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 PSMD8P48556 350 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 RGS4P49798 205 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 HSPA14Q0VDF9 509 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 TBCELQ5QJ74 424 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 CERS6Q6ZMG9 384 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 ZBTB2Q8N680 514 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 CLHC1Q8NHS4 586 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 ZNF382Q96SR6 550 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 CENPKQ9BS16 269 aa15.5■□□□□ 0.07
LRFN1-201ENST00000248668 TCRBV3S1A0A5B6 114 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 HIDE1A8MVS5 230 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 LHCGRP22888 699 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 ERVK-8P63133 956 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 RPL38P63173 70 aaKnown RBP15.49■□□□□ 0.07
LRFN1-201ENST00000248668 AP5B1Q2VPB7 878 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 ZNF697Q5TEC3 545 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 PLPP4Q5VZY2 271 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 ZNF366Q8N895 744 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 PROKR1Q8TCW9 393 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 ERLEC1Q96DZ1 483 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 TOX2Q96NM4 488 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 PRPF18Q99633 342 aaKnown RBP15.49■□□□□ 0.07
LRFN1-201ENST00000248668 FAM126AQ9BYI3 521 aaPredicted RBP15.49■□□□□ 0.07
LRFN1-201ENST00000248668 RIC8BQ9NVN3 520 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 CIDEBQ9UHD4 219 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP15.49■□□□□ 0.07
LRFN1-201ENST00000248668 A0A1W2PP18 115 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 ARPC2O15144 300 aa15.49■□□□□ 0.07
LRFN1-201ENST00000248668 RSL1D1O76021 490 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms