RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 STARD7Q9NQZ5 370 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 COMMD8Q9NX08 183 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 ZNF711Q9Y462 761 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 GRXCR2A6NFK2 248 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 ARNTLO00327 626 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 LSM1O15116 133 aaKnown RBP17.01■□□□□ 0.31
USB1-201ENST00000219281 GPR39O43194 453 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 TLR5O60602 858 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 JUNBP17275 347 aaPredicted RBP17.01■□□□□ 0.31
USB1-201ENST00000219281 IST1P53990 364 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 OXCT1P55809 520 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 RFTN2Q52LD8 501 aaPredicted RBP17.01■□□□□ 0.31
USB1-201ENST00000219281 GOLGA7Q7Z5G4 137 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 THAP5Q7Z6K1 395 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 BPIFB6Q8NFQ5 453 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 OR4F6Q8NGB9 312 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 FBXO30Q8TB52 745 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 ZNF583Q96ND8 569 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 CRISPLD1Q9H336 500 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 TOR3AQ9H497 397 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 SMURF2Q9HAU4 748 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 GPBP1L1Q9HC44 474 aaPredicted RBP17.01■□□□□ 0.31
USB1-201ENST00000219281 LTB4R2Q9NPC1 389 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 FRMPD3Q5JV73 1810 aa17.01■□□□□ 0.31
USB1-201ENST00000219281 OR7A17O14581 309 aa17■□□□□ 0.31
USB1-201ENST00000219281 ANKRD28O15084 1053 aa17■□□□□ 0.31
USB1-201ENST00000219281 PFDN6O15212 129 aa17■□□□□ 0.31
USB1-201ENST00000219281 DFNA5O60443 496 aa17■□□□□ 0.31
USB1-201ENST00000219281 GMNNO75496 209 aa17■□□□□ 0.31
USB1-201ENST00000219281 SEC14L2O76054 403 aa17■□□□□ 0.31
USB1-201ENST00000219281 ZBTB11O95625 1053 aaPredicted RBP17■□□□□ 0.31
USB1-201ENST00000219281 INHAP05111 366 aa17■□□□□ 0.31
USB1-201ENST00000219281 IL7RP16871 459 aa17■□□□□ 0.31
USB1-201ENST00000219281 CR2P20023 1033 aa17■□□□□ 0.31
USB1-201ENST00000219281 TMBIM6P55061 237 aa17■□□□□ 0.31
USB1-201ENST00000219281 RPS24P62847 133 aaKnown RBP17■□□□□ 0.31
USB1-201ENST00000219281 ABRAXAS2Q15018 415 aa17■□□□□ 0.31
USB1-201ENST00000219281 MOGQ16653 247 aa17■□□□□ 0.31
USB1-201ENST00000219281 DEFB115Q30KQ5 88 aa17■□□□□ 0.31
USB1-201ENST00000219281 ACBD5Q5T8D3 534 aaPredicted RBP17■□□□□ 0.31
USB1-201ENST00000219281 XAF1Q6GPH4 301 aa17■□□□□ 0.31
USB1-201ENST00000219281 ENPP6Q6UWR7 440 aa17■□□□□ 0.31
USB1-201ENST00000219281 PRR23BQ6ZRT6 265 aa17■□□□□ 0.31
USB1-201ENST00000219281 FRA10AC1Q70Z53 315 aa17■□□□□ 0.31
USB1-201ENST00000219281 R3HCC1LQ7Z5L2 792 aaKnown RBP17■□□□□ 0.31
USB1-201ENST00000219281 SLC22A17Q8WUG5 538 aa17■□□□□ 0.31
USB1-201ENST00000219281 KCNJ9Q92806 393 aa17■□□□□ 0.31
USB1-201ENST00000219281 LHPPQ9H008 270 aa17■□□□□ 0.31
USB1-201ENST00000219281 CREBZFQ9NS37 354 aa17■□□□□ 0.31
USB1-201ENST00000219281 ZMYM5Q9UJ78 669 aa17■□□□□ 0.31
USB1-201ENST00000219281 ARIH1Q9Y4X5 557 aaPredicted RBP17■□□□□ 0.31
USB1-201ENST00000219281 NEUROG3Q9Y4Z2 214 aa17■□□□□ 0.31
USB1-201ENST00000219281 RAI2Q9Y5P3 530 aa17■□□□□ 0.31
USB1-201ENST00000219281 G3V2T6 193 aa17■□□□□ 0.31
USB1-201ENST00000219281 GSTA4O15217 222 aa17■□□□□ 0.31
USB1-201ENST00000219281 STX7O15400 261 aaKnown RBP17■□□□□ 0.31
USB1-201ENST00000219281 NBNO60934 754 aa17■□□□□ 0.31
USB1-201ENST00000219281 PSMA3P25788 255 aa17■□□□□ 0.31
USB1-201ENST00000219281 PSMD7P51665 324 aa17■□□□□ 0.31
USB1-201ENST00000219281 BMXP51813 675 aa17■□□□□ 0.31
USB1-201ENST00000219281 C16orf87Q6PH81 154 aa17■□□□□ 0.31
USB1-201ENST00000219281 ZDHHC13Q8IUH4 622 aa17■□□□□ 0.31
USB1-201ENST00000219281 C8orf59Q8N0T1 100 aaPredicted RBP17■□□□□ 0.31
USB1-201ENST00000219281 DDHD1Q8NEL9 900 aa17■□□□□ 0.31
USB1-201ENST00000219281 GIPC2Q8TF65 315 aa17■□□□□ 0.31
USB1-201ENST00000219281 NUDT4Q9NZJ9 180 aa17■□□□□ 0.31
USB1-201ENST00000219281 VAPAQ9P0L0 249 aa17■□□□□ 0.31
USB1-201ENST00000219281 AGO1Q9UL18 857 aaKnown RBP17■□□□□ 0.31
USB1-201ENST00000219281 ST14Q9Y5Y6 855 aa17■□□□□ 0.31
USB1-201ENST00000219281 COMMD10Q9Y6G5 202 aa17■□□□□ 0.31
USB1-201ENST00000219281 ANKRD12Q6UB98 2062 aa17■□□□□ 0.31
USB1-201ENST00000219281 ARVCFO00192 962 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 KDELR3O43731 214 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 NOBOXO60393 691 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 ABCB7O75027 752 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 KCNH1O95259 989 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 IMPDH2P12268 514 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 CRHBPP24387 322 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 LAPTM5Q13571 262 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 GTF2H2Q13888 395 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 CBX2Q14781 532 aaPredicted RBP16.99■□□□□ 0.31
USB1-201ENST00000219281 SULT1C3Q6IMI6 304 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 GTF2H2CQ6P1K8 395 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 HS3ST5Q8IZT8 346 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 CFHR5Q9BXR6 569 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 GPR62Q9BZJ7 368 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 SMPD4Q9NXE4 827 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 ANKRD66B4E2M5 251 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 J3QRK9 145 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 ZSCAN9O15535 394 aaPredicted RBP16.99■□□□□ 0.31
USB1-201ENST00000219281 ACSL4O60488 711 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 TSPAN3O60637 253 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 SLC2A4P14672 509 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 CD9P21926 228 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 GATMP50440 423 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 CLCN4P51793 760 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 CLCN7P51798 805 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 NKG7Q16617 165 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 IMPG1Q17R60 797 aa16.99■□□□□ 0.31
USB1-201ENST00000219281 FAM171A1Q5VUB5 890 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms