RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 MAPK9P45984 424 aa12.75□□□□□ -0.37
PHGDH-218ENST00000641491 PPM1FP49593 454 aaPredicted RBP12.75□□□□□ -0.37
PHGDH-218ENST00000641491 HK3P52790 923 aa12.75□□□□□ -0.37
PHGDH-218ENST00000641491 HSPA14Q0VDF9 509 aa12.75□□□□□ -0.37
PHGDH-218ENST00000641491 DNAJC3Q13217 504 aa12.75□□□□□ -0.37
PHGDH-218ENST00000641491 TTC23LQ6PF05 361 aa12.75□□□□□ -0.37
PHGDH-218ENST00000641491 TDRPQ86YL5 185 aa12.75□□□□□ -0.37
PHGDH-218ENST00000641491 TRIM48Q8IWZ4 208 aa12.75□□□□□ -0.37
PHGDH-218ENST00000641491 CFAP206Q8IYR0 622 aa12.75□□□□□ -0.37
PHGDH-218ENST00000641491 NKAPQ8N5F7 415 aaKnown RBP12.75□□□□□ -0.37
PHGDH-218ENST00000641491 LMX1AQ8TE12 382 aa12.75□□□□□ -0.37
PHGDH-218ENST00000641491 INPP5DQ92835 1189 aa12.75□□□□□ -0.37
PHGDH-218ENST00000641491 GPR22Q99680 433 aa12.75□□□□□ -0.37
PHGDH-218ENST00000641491 TRPM6Q9BX84 2022 aa12.75□□□□□ -0.37
PHGDH-218ENST00000641491 P2RY12Q9H244 342 aa12.75□□□□□ -0.37
PHGDH-218ENST00000641491 VPS11Q9H270 941 aa12.75□□□□□ -0.37
PHGDH-218ENST00000641491 PLAC1Q9HBJ0 212 aa12.75□□□□□ -0.37
PHGDH-218ENST00000641491 POPDC3Q9HBV1 291 aa12.75□□□□□ -0.37
PHGDH-218ENST00000641491 FGF22Q9HCT0 170 aa12.75□□□□□ -0.37
PHGDH-218ENST00000641491 LATS2Q9NRM7 1088 aa12.75□□□□□ -0.37
PHGDH-218ENST00000641491 KLC4Q9NSK0 619 aa12.75□□□□□ -0.37
PHGDH-218ENST00000641491 EVA1BQ9NVM1 165 aa12.75□□□□□ -0.37
PHGDH-218ENST00000641491 PRKAB1Q9Y478 270 aa12.75□□□□□ -0.37
PHGDH-218ENST00000641491 DGKBQ9Y6T7 804 aa12.75□□□□□ -0.37
PHGDH-218ENST00000641491 GPR179Q6PRD1 2367 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 A0A087X1B8 175 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 MGAT4DA6NG13 374 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 FOXD2O60548 495 aaPredicted RBP12.74□□□□□ -0.37
PHGDH-218ENST00000641491 NIPSNAP2O75323 286 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 TCEA3O75764 348 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 FAM155BO75949 473 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 ANXA6P08133 673 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 F7P08709 466 aaPredicted RBP12.74□□□□□ -0.37
PHGDH-218ENST00000641491 ENO3P13929 434 aaPredicted RBP12.74□□□□□ -0.37
PHGDH-218ENST00000641491 ACTR1BP42025 376 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 CCT8P50990 548 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 CTSCP53634 463 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 IL2P60568 153 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 RAB10P61026 200 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 ACTR1AP61163 376 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 GRIK2Q13002 908 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 FZD2Q14332 565 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 SUZ12Q15022 739 aaKnown RBP12.74□□□□□ -0.37
PHGDH-218ENST00000641491 TCEA2Q15560 299 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 ALG11Q2TAA5 492 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 KIF19Q2TAC6 998 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 ZNF542PQ5EBM4 170 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 PRRT3Q5FWE3 981 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 PLEKHS1Q5SXH7 462 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 ADGRD1Q6QNK2 874 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 FRA10AC1Q70Z53 315 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 KRT222Q8N1A0 295 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 SLC22A18ASQ8N1D0 253 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 RAB42Q8N4Z0 105 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 DCLK2Q8N568 766 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 OR2L2Q8NH16 312 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 DCAKDQ8WVC6 231 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 OR1E3Q8WZA6 343 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 GLMNQ92990 594 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 SMC6Q96SB8 1091 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 GPR21Q99679 349 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 ERVMER34-1Q9H9K5 563 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 MRPL40Q9NQ50 206 aaKnown RBP12.74□□□□□ -0.37
PHGDH-218ENST00000641491 TRNAU1APQ9NX07 287 aaKnown RBP12.74□□□□□ -0.37
PHGDH-218ENST00000641491 SENP1Q9P0U3 644 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 TSR3Q9UJK0 312 aaKnown RBP12.74□□□□□ -0.37
PHGDH-218ENST00000641491 TMPRSS11EQ9UL52 423 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 ACSL5Q9ULC5 683 aa12.74□□□□□ -0.37
PHGDH-218ENST00000641491 MTO1Q9Y2Z2 717 aaKnown RBP12.74□□□□□ -0.37
PHGDH-218ENST00000641491 C17orf113A0A1B0GUU1 675 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 CHUKO15111 745 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 SCAMP1O15126 338 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 CSF2P04141 144 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 S100BP04271 92 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-218ENST00000641491 WNT1P04628 370 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 CBSLP0DN79 551 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 NME1P15531 152 aaKnown RBP12.73□□□□□ -0.37
PHGDH-218ENST00000641491 SDHBP21912 280 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 MAP4P27816 1152 aaKnown RBP12.73□□□□□ -0.37
PHGDH-218ENST00000641491 CBSP35520 551 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 ARHGAP8P85298 464 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 B4GALNT1Q00973 533 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 RPA4Q13156 261 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 RSPO4Q2I0M5 234 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-218ENST00000641491 FAM83EQ2M2I3 478 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 KHDC1Q4VXA5 237 aaKnown RBP12.73□□□□□ -0.37
PHGDH-218ENST00000641491 PYCR3Q53H96 274 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 ZNF789Q5FWF6 425 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 CTSL3PQ5NE16 218 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 RBM20Q5T481 1227 aaKnown RBP12.73□□□□□ -0.37
PHGDH-218ENST00000641491 UBAP2Q5T6F2 1119 aaKnown RBP12.73□□□□□ -0.37
PHGDH-218ENST00000641491 PEAR1Q5VY43 1037 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-218ENST00000641491 SLC30A9Q6PML9 568 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 KDM7AQ6ZMT4 941 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 AVL9Q8NBF6 648 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 SIDT2Q8NBJ9 832 aaKnown RBP12.73□□□□□ -0.37
PHGDH-218ENST00000641491 LINC00615Q96LM1 132 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-218ENST00000641491 ELF4Q99607 663 aaPredicted RBP12.73□□□□□ -0.37
PHGDH-218ENST00000641491 ORAI3Q9BRQ5 295 aa12.73□□□□□ -0.37
PHGDH-218ENST00000641491 ZMYND15Q9H091 742 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms