RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 CDKL3Q8IVW4 592 aaPredicted RBP11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 DEFB106AQ8N104 65 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 TTC30BQ8N4P2 665 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 PQLC3Q8N755 202 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 PTCD2Q8WV60 388 aaKnown RBP11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 CENPIQ92674 756 aaPredicted RBP11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 TOP1MTQ969P6 601 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 MTMR10Q9NXD2 777 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 KIF17Q9P2E2 1029 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 INVSQ9Y283 1065 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 PTGDR2Q9Y5Y4 395 aa11.72□□□□□ -0.53
RBFOX1-224ENST00000641259 PTPRDP23468 1912 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 HMX2A2RU54 273 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 ISPDA4D126 451 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 TCAF2A6NFQ2 919 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 NCF1BA6NI72 391 aaPredicted RBP11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 NCF1CA8MVU1 366 aaPredicted RBP11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 I6L893 689 aaPredicted RBP11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 TPPPO94811 219 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 RPLP2P05387 115 aaKnown RBP11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 OR4Q2P0C623 313 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 THRBP10828 461 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 NCF1P14598 390 aaPredicted RBP11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 LRRC8DQ7L1W4 858 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 PDPRQ8NCN5 879 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 TOR1AIP2Q8NFQ8 470 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 BRSK1Q8TDC3 778 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 MYLPFQ96A32 169 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 FYTTD1Q96QD9 318 aaKnown RBP11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 DCSTAMPQ9H295 470 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 ATP6V1HQ9UI12 483 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 A0A0J9YYE9 177 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 PRR23AA6NEV1 266 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 YJEFN3A6XGL0 299 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 CENPBD1B2RD01 187 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 CD36P16671 472 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 MYF6P23409 242 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 BDNFP23560 247 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 ARL4AP40617 200 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 CXCR3P49682 368 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 GPLD1P80108 840 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 CCDC149Q6ZUS6 474 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 PPM1MQ96MI6 270 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 DEFB118Q96PH6 123 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 UCK2Q9BZX2 261 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 OR2B2Q9GZK3 357 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 MMP28Q9H239 520 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 ABCB9Q9NP78 766 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 USP22Q9UPT9 525 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 TESMINQ9Y4I5 508 aa11.71□□□□□ -0.53
RBFOX1-224ENST00000641259 EFCAB9A8MZ26 197 aa11.71□□□□□ -0.54
RBFOX1-224ENST00000641259 M0QZQ0 153 aa11.71□□□□□ -0.54
RBFOX1-224ENST00000641259 CDK2AP1O14519 115 aa11.71□□□□□ -0.54
RBFOX1-224ENST00000641259 ACOT8O14734 319 aa11.71□□□□□ -0.54
RBFOX1-224ENST00000641259 ABCB7O75027 752 aa11.71□□□□□ -0.54
RBFOX1-224ENST00000641259 KRT6AP02538 564 aa11.71□□□□□ -0.54
RBFOX1-224ENST00000641259 KRT6BP04259 564 aa11.71□□□□□ -0.54
RBFOX1-224ENST00000641259 CBLP22681 906 aa11.71□□□□□ -0.54
RBFOX1-224ENST00000641259 HLCSP50747 726 aa11.71□□□□□ -0.54
RBFOX1-224ENST00000641259 TKTL1P51854 596 aa11.71□□□□□ -0.54
RBFOX1-224ENST00000641259 TYSND1Q2T9J0 566 aa11.71□□□□□ -0.54
RBFOX1-224ENST00000641259 ZNF544Q6NX49 715 aa11.71□□□□□ -0.54
RBFOX1-224ENST00000641259 DRICH1Q6PGQ1 229 aaPredicted RBP11.71□□□□□ -0.54
RBFOX1-224ENST00000641259 SLC24A5Q71RS6 500 aa11.71□□□□□ -0.54
RBFOX1-224ENST00000641259 MILR1Q7Z6M3 343 aa11.71□□□□□ -0.54
RBFOX1-224ENST00000641259 LINC00523Q86TU6 105 aa11.71□□□□□ -0.54
RBFOX1-224ENST00000641259 FAM131BQ86XD5 332 aa11.71□□□□□ -0.54
RBFOX1-224ENST00000641259 ZDHHC17Q8IUH5 632 aa11.71□□□□□ -0.54
RBFOX1-224ENST00000641259 P3H2Q8IVL5 708 aa11.71□□□□□ -0.54
RBFOX1-224ENST00000641259 PLD5Q8N7P1 536 aa11.71□□□□□ -0.54
RBFOX1-224ENST00000641259 PCDH19Q8TAB3 1148 aa11.71□□□□□ -0.54
RBFOX1-224ENST00000641259 TMEM9Q9P0T7 183 aa11.71□□□□□ -0.54
RBFOX1-224ENST00000641259 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.71□□□□□ -0.54
RBFOX1-224ENST00000641259 FETUBQ9UGM5 382 aa11.71□□□□□ -0.54
RBFOX1-224ENST00000641259 MRPS7Q9Y2R9 242 aaKnown RBP11.71□□□□□ -0.54
RBFOX1-224ENST00000641259 VWA8A3KMH1 1905 aa11.71□□□□□ -0.54
RBFOX1-224ENST00000641259 PNMA8CA0A1B0GUJ8 204 aa11.7□□□□□ -0.54
RBFOX1-224ENST00000641259 ZNF99A8MXY4 864 aaPredicted RBP11.7□□□□□ -0.54
RBFOX1-224ENST00000641259 SOAT2O75908 522 aa11.7□□□□□ -0.54
RBFOX1-224ENST00000641259 ANGPTL1O95841 491 aa11.7□□□□□ -0.54
RBFOX1-224ENST00000641259 USP17L7P0C7H9 530 aa11.7□□□□□ -0.54
RBFOX1-224ENST00000641259 CCNYL3P0C7X3 344 aa11.7□□□□□ -0.54
RBFOX1-224ENST00000641259 LHX1P48742 406 aa11.7□□□□□ -0.54
RBFOX1-224ENST00000641259 PGFP49763 221 aa11.7□□□□□ -0.54
RBFOX1-224ENST00000641259 KCNJ11Q14654 390 aa11.7□□□□□ -0.54
RBFOX1-224ENST00000641259 ANKRD34AQ69YU3 496 aa11.7□□□□□ -0.54
RBFOX1-224ENST00000641259 HIPK1Q86Z02 1210 aa11.7□□□□□ -0.54
RBFOX1-224ENST00000641259 TMEM86AQ8N2M4 240 aa11.7□□□□□ -0.54
RBFOX1-224ENST00000641259 GTF2H4Q92759 462 aa11.7□□□□□ -0.54
RBFOX1-224ENST00000641259 B3GALT6Q96L58 329 aa11.7□□□□□ -0.54
RBFOX1-224ENST00000641259 C2orf49Q9BVC5 232 aaPredicted RBP11.7□□□□□ -0.54
RBFOX1-224ENST00000641259 ULBP1Q9BZM6 244 aa11.7□□□□□ -0.54
RBFOX1-224ENST00000641259 DSN1Q9H410 356 aa11.7□□□□□ -0.54
RBFOX1-224ENST00000641259 RANGRFQ9HD47 186 aaPredicted RBP11.7□□□□□ -0.54
RBFOX1-224ENST00000641259 TIGARQ9NQ88 270 aa11.7□□□□□ -0.54
RBFOX1-224ENST00000641259 PDE4DIPQ5VU43 2346 aa11.7□□□□□ -0.54
RBFOX1-224ENST00000641259 E7ESA3 106 aa11.7□□□□□ -0.54
RBFOX1-224ENST00000641259 SMLR1H3BR10 107 aa11.7□□□□□ -0.54
RBFOX1-224ENST00000641259 TSPAN3O60637 253 aa11.7□□□□□ -0.54
RBFOX1-224ENST00000641259 CYP2F1P24903 491 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms