RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 ARL5AQ9Y689 179 aa7.71□□□□□ -1.18
PNKP-229ENST00000637897 TENM4Q6N022 2769 aa7.71□□□□□ -1.18
PNKP-229ENST00000637897 MN1Q10571 1320 aaPredicted RBP7.71□□□□□ -1.18
PNKP-229ENST00000637897 NAV2Q8IVL1 2488 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 LILRA5A6NI73 299 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 EFCAB7A8K855 629 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 AGAP14A8MT82 685 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 A8MU76 341 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 B4E171 279 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 APOC4-APOC2K7ER74 178 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 CCL22O00626 93 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 TERTO14746 1132 aaKnown RBP7.7□□□□□ -1.18
PNKP-229ENST00000637897 APOC2P02655 101 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 TYRP1P17643 537 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 XRCC1P18887 633 aaPredicted RBP7.7□□□□□ -1.18
PNKP-229ENST00000637897 CA4P22748 312 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 NFKBIAP25963 317 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 RPL10P27635 214 aaKnown RBP7.7□□□□□ -1.18
PNKP-229ENST00000637897 PSMB4P28070 264 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 OAS2P29728 719 aaKnown RBP7.7□□□□□ -1.18
PNKP-229ENST00000637897 PTPN7P35236 360 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 COILP38432 576 aaPredicted RBP7.7□□□□□ -1.18
PNKP-229ENST00000637897 TSPAN7P41732 249 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 CDKN1CP49918 316 aaPredicted RBP7.7□□□□□ -1.18
PNKP-229ENST00000637897 UCNP55089 124 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 GDF10P55107 478 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 SH3BP2P78314 561 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 GPLD1P80108 840 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 MRPS25P82663 173 aaKnown RBP7.7□□□□□ -1.18
PNKP-229ENST00000637897 MC2RQ01718 297 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 RHDQ02161 417 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 TMEM115Q12893 351 aaPredicted RBP7.7□□□□□ -1.18
PNKP-229ENST00000637897 KLF1Q13351 362 aaPredicted RBP7.7□□□□□ -1.18
PNKP-229ENST00000637897 TRA2AQ13595 282 aaKnown RBP eCLIP7.7□□□□□ -1.18
PNKP-229ENST00000637897 PEX6Q13608 980 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 TFDP2Q14188 446 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 SPARCL1Q14515 664 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 SIX1Q15475 284 aaPredicted RBP7.7□□□□□ -1.18
PNKP-229ENST00000637897 KCTD19Q17RG1 926 aaPredicted RBP7.7□□□□□ -1.18
PNKP-229ENST00000637897 GPRC6AQ5T6X5 926 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 DUPD1Q68J44 220 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 KCTD11Q693B1 232 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 PDPK2PQ6A1A2 396 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 CCDC137Q6PK04 289 aaKnown RBP7.7□□□□□ -1.18
PNKP-229ENST00000637897 WDR74Q6RFH5 385 aaPredicted RBP7.7□□□□□ -1.18
PNKP-229ENST00000637897 FAM151BQ6UXP7 276 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 CERS6Q6ZMG9 384 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 CCDC81Q6ZN84 652 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 TMEM26Q6ZUK4 368 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 PID1Q7Z2X4 250 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 CCDC50Q8IVM0 306 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 GSPT2Q8IYD1 628 aaKnown RBP7.7□□□□□ -1.18
PNKP-229ENST00000637897 BEND7Q8N7W2 519 aaPredicted RBP7.7□□□□□ -1.18
PNKP-229ENST00000637897 IPMKQ8NFU5 416 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 CCDC110Q8TBZ0 833 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 CCHCR1Q8TD31 782 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 DTX3LQ8TDB6 740 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 NCSTNQ92542 709 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 P3H4Q92791 437 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 EXTL1Q92935 676 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 LRRC45Q96CN5 670 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 TAAR9Q96RI9 348 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 RUFY1Q96T51 708 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 SLC38A3Q99624 504 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 TIMM29Q9BSF4 260 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 FICDQ9BVA6 458 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 OSBPL8Q9BZF1 889 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 GBA3Q9H227 469 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 SLC40A1Q9NP59 571 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 SEMA5BQ9P283 1151 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 PILRAQ9UKJ1 303 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 EFR3BQ9Y2G0 817 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 DNAJC16Q9Y2G8 782 aa7.7□□□□□ -1.18
PNKP-229ENST00000637897 SEC16AO15027 2179 aa7.69□□□□□ -1.18
PNKP-229ENST00000637897 KIR2DS5A0A0G2JLQ3 304 aa7.69□□□□□ -1.18
PNKP-229ENST00000637897 A0A0G2JNG1 304 aa7.69□□□□□ -1.18
PNKP-229ENST00000637897 LOC101059948A0A1B0GTJ6 334 aa7.69□□□□□ -1.18
PNKP-229ENST00000637897 ESYT3A0FGR9 886 aa7.69□□□□□ -1.18
PNKP-229ENST00000637897 HACD1B0YJ81 288 aa7.69□□□□□ -1.18
PNKP-229ENST00000637897 KIR2DS3K7RE56 304 aa7.69□□□□□ -1.18
PNKP-229ENST00000637897 LDB2O43679 373 aa7.69□□□□□ -1.18
PNKP-229ENST00000637897 DUX1O43812 170 aa7.69□□□□□ -1.18
PNKP-229ENST00000637897 VEGFDO43915 354 aa7.69□□□□□ -1.18
PNKP-229ENST00000637897 CDK14O94921 469 aa7.69□□□□□ -1.18
PNKP-229ENST00000637897 TJP3O95049 919 aa7.69□□□□□ -1.18
PNKP-229ENST00000637897 TIAF1O95411 115 aa7.69□□□□□ -1.18
PNKP-229ENST00000637897 METTL18O95568 372 aa7.69□□□□□ -1.18
PNKP-229ENST00000637897 DLGAP3O95886 979 aa7.69□□□□□ -1.18
PNKP-229ENST00000637897 GAS8O95995 478 aa7.69□□□□□ -1.18
PNKP-229ENST00000637897 LIFP15018 202 aa7.69□□□□□ -1.18
PNKP-229ENST00000637897 PTGIRP43119 386 aa7.69□□□□□ -1.18
PNKP-229ENST00000637897 NFKB2Q00653 900 aa7.69□□□□□ -1.18
PNKP-229ENST00000637897 DMPKQ09013 629 aa7.69□□□□□ -1.18
PNKP-229ENST00000637897 MPP3Q13368 585 aa7.69□□□□□ -1.18
PNKP-229ENST00000637897 XRCC4Q13426 336 aa7.69□□□□□ -1.18
PNKP-229ENST00000637897 GPR18Q14330 331 aa7.69□□□□□ -1.18
PNKP-229ENST00000637897 NFE2L1Q14494 772 aa7.69□□□□□ -1.18
PNKP-229ENST00000637897 KIR2DS5Q14953 304 aa7.69□□□□□ -1.18
PNKP-229ENST00000637897 SEPT7Q16181 437 aaKnown RBP7.69□□□□□ -1.18
PNKP-229ENST00000637897 CCNG2Q16589 344 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms