RNA–Protein interactions for RNA: ENST00000637823.1

CLN6-223, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 717 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-223ENST00000637823 EML5Q05BV3 1969 aa11.58□□□□□ -0.56
CLN6-223ENST00000637823 C17orf113A0A1B0GUU1 675 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 CDC7O00311 574 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 BTN3A1O00481 513 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 FPGTO14772 594 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 CHUKO15111 745 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 SLC31A1O15431 190 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 LATO43561 262 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 NUAK1O60285 661 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 LILRB5O75023 590 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 GPC4O75487 556 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 SLCO2B1O94956 709 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 FAM107AO95990 144 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 SERPINE1P05121 402 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 MYCLP1P12525 358 aaPredicted RBP11.57□□□□□ -0.56
CLN6-223ENST00000637823 ZNF8P17098 575 aaPredicted RBP11.57□□□□□ -0.56
CLN6-223ENST00000637823 CD6P30203 668 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 IGFALSP35858 605 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 NUDT1P36639 197 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 ACSBG2Q5FVE4 666 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 LIPMQ5VYY2 423 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 KIAA0895LQ68EN5 471 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 MAMSTRQ6ZN01 415 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 GPSM1Q86YR5 675 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 OR6Y1Q8NGX8 325 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 FUBP1Q96AE4 644 aaKnown RBP11.57□□□□□ -0.56
CLN6-223ENST00000637823 GRAMD1AQ96CP6 724 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 TOE1Q96GM8 510 aaKnown RBP11.57□□□□□ -0.56
CLN6-223ENST00000637823 LINC00615Q96LM1 132 aaPredicted RBP11.57□□□□□ -0.56
CLN6-223ENST00000637823 ATOH8Q96SQ7 321 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 LGR4Q9BXB1 951 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.57□□□□□ -0.56
CLN6-223ENST00000637823 RNF112Q9ULX5 631 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 CYP8B1Q9UNU6 501 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 TMEM98Q9Y2Y6 226 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 HS3ST3A1Q9Y663 406 aa11.57□□□□□ -0.56
CLN6-223ENST00000637823 SLC5A10A0PJK1 596 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 KLHL33A6NCF5 533 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 NPEPPSL1A6NEC2 478 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 TMEM114B3SHH9 223 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 CACNB4O00305 520 aaPredicted RBP11.56□□□□□ -0.56
CLN6-223ENST00000637823 TOR1BO14657 336 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 LIN7AO14910 233 aaPredicted RBP11.56□□□□□ -0.56
CLN6-223ENST00000637823 EDF1O60869 148 aaKnown RBP11.56□□□□□ -0.56
CLN6-223ENST00000637823 SNNO75324 88 aaPredicted RBP11.56□□□□□ -0.56
CLN6-223ENST00000637823 IPO13O94829 963 aaKnown RBP11.56□□□□□ -0.56
CLN6-223ENST00000637823 IMPDH1P20839 514 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 HNRNPA2B1P22626 353 aaKnown RBP11.56□□□□□ -0.56
CLN6-223ENST00000637823 AKT2P31751 481 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 CXCL12P48061 93 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 SLC1A6P48664 564 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 NFKB2Q00653 900 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 PLOD1Q02809 727 aaPredicted RBP11.56□□□□□ -0.56
CLN6-223ENST00000637823 SIGLEC14Q08ET2 396 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 HSPA14Q0VDF9 509 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 BST1Q10588 318 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 MTAPQ13126 283 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 BOP1Q14137 746 aaKnown RBP11.56□□□□□ -0.56
CLN6-223ENST00000637823 TSNQ15631 228 aaKnown RBP11.56□□□□□ -0.56
CLN6-223ENST00000637823 TMEM31Q5JXX7 168 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 NAPRTQ6XQN6 538 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 PIWIL4Q7Z3Z4 852 aaKnown RBP11.56□□□□□ -0.56
CLN6-223ENST00000637823 ADAMTSL2Q86TH1 951 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 LRRTM4Q86VH4 590 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 TRAPPC5Q8IUR0 188 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 BEND7Q8N7W2 519 aaPredicted RBP11.56□□□□□ -0.56
CLN6-223ENST00000637823 OR2L2Q8NH16 312 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 BCAS4Q8TDM0 211 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 FOXJ1Q92949 421 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 TMEM159Q96B96 161 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 PCED1AQ9H1Q7 454 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 RMI1Q9H9A7 625 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 FGFR1OP2Q9NVK5 253 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 THAP1Q9NVV9 213 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 IKZF3Q9UKT9 509 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 DMTF1Q9Y222 760 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 CDYLQ9Y232 598 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 OR1A2Q9Y585 309 aa11.56□□□□□ -0.56
CLN6-223ENST00000637823 IGHV1OR15-9A0A0B4J2B8 117 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 MGAT4DA6NG13 374 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 A8MT66 165 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 UBXN8O00124 270 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 KMOO15229 486 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 SLC16A5O15375 505 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 KLK8O60259 260 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 POP7O75817 140 aaKnown RBP11.55□□□□□ -0.56
CLN6-223ENST00000637823 SNUPNO95149 360 aaKnown RBP11.55□□□□□ -0.56
CLN6-223ENST00000637823 C8GP07360 202 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 DCNP07585 359 aaKnown RBP11.55□□□□□ -0.56
CLN6-223ENST00000637823 MTHFD2P13995 350 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 SERPINB5P36952 375 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 MAPK9P45984 424 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 CCR3P51677 355 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 NAGLUP54802 743 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 KIAA1024LP59773 190 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 ABCE1P61221 599 aaKnown RBP11.55□□□□□ -0.56
CLN6-223ENST00000637823 NAA20P61599 178 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 YPEL5P62699 121 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 ARHGAP8P85298 464 aa11.55□□□□□ -0.56
CLN6-223ENST00000637823 ZNF658BQ4V348 819 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms