RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 S100A14Q9HCY8 104 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 MRPL40Q9NQ50 206 aaKnown RBP21.71■■□□□ 1.07
PNKP-220ENST00000627232 ELOVL2Q9NXB9 296 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 CCDC167Q9P0B6 97 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 BCAP29Q9UHQ4 241 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 ADAMTS6Q9UKP5 1117 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 BTRCQ9Y297 605 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 TIMM22Q9Y584 194 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 PTGDR2Q9Y5Y4 395 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 ST14Q9Y5Y6 855 aa21.71■■□□□ 1.07
PNKP-220ENST00000627232 KPNA5O15131 536 aa21.7■■□□□ 1.07
PNKP-220ENST00000627232 TAPBPO15533 448 aa21.7■■□□□ 1.07
PNKP-220ENST00000627232 OR4F21O95013 312 aa21.7■■□□□ 1.07
PNKP-220ENST00000627232 IDO1P14902 403 aa21.7■■□□□ 1.07
PNKP-220ENST00000627232 ANPEPP15144 967 aa21.7■■□□□ 1.07
PNKP-220ENST00000627232 XPAP23025 273 aaPredicted RBP21.7■■□□□ 1.07
PNKP-220ENST00000627232 LRP8Q14114 963 aa21.7■■□□□ 1.07
PNKP-220ENST00000627232 GRB7Q14451 532 aa21.7■■□□□ 1.07
PNKP-220ENST00000627232 ZNF423Q2M1K9 1284 aa21.7■■□□□ 1.07
PNKP-220ENST00000627232 MMEL1Q495T6 779 aa21.7■■□□□ 1.07
PNKP-220ENST00000627232 CMPK2Q5EBM0 449 aa21.7■■□□□ 1.07
PNKP-220ENST00000627232 FAM219BQ5XKK7 198 aa21.7■■□□□ 1.07
PNKP-220ENST00000627232 REP15Q6BDI9 236 aa21.7■■□□□ 1.07
PNKP-220ENST00000627232 MIER2Q8N344 545 aa21.7■■□□□ 1.07
PNKP-220ENST00000627232 TRAM1L1Q8N609 369 aa21.7■■□□□ 1.07
PNKP-220ENST00000627232 NAT14Q8WUY8 206 aa21.7■■□□□ 1.07
PNKP-220ENST00000627232 NOL11Q9H8H0 719 aaKnown RBP21.7■■□□□ 1.07
PNKP-220ENST00000627232 RIC8BQ9NVN3 520 aa21.7■■□□□ 1.07
PNKP-220ENST00000627232 DZANK1Q9NVP4 752 aa21.7■■□□□ 1.07
PNKP-220ENST00000627232 TSR3Q9UJK0 312 aaKnown RBP21.7■■□□□ 1.07
PNKP-220ENST00000627232 MUC22E2RYF6 1773 aaPredicted RBP21.7■■□□□ 1.06
PNKP-220ENST00000627232 CFAP99D6REC4 459 aa21.7■■□□□ 1.06
PNKP-220ENST00000627232 FBP2O00757 339 aa21.7■■□□□ 1.06
PNKP-220ENST00000627232 NRP2O60462 931 aa21.7■■□□□ 1.06
PNKP-220ENST00000627232 AP2A2O94973 939 aa21.7■■□□□ 1.06
PNKP-220ENST00000627232 OTCP00480 354 aa21.7■■□□□ 1.06
PNKP-220ENST00000627232 MPC1LP0DKB6 136 aa21.7■■□□□ 1.06
PNKP-220ENST00000627232 HGFP14210 728 aa21.7■■□□□ 1.06
PNKP-220ENST00000627232 ATP1B2P14415 290 aaPredicted RBP21.7■■□□□ 1.06
PNKP-220ENST00000627232 FSHRP23945 695 aa21.7■■□□□ 1.06
PNKP-220ENST00000627232 AOAHP28039 575 aa21.7■■□□□ 1.06
PNKP-220ENST00000627232 NRIP1P48552 1158 aa21.7■■□□□ 1.06
PNKP-220ENST00000627232 PSMD8P48556 350 aa21.7■■□□□ 1.06
PNKP-220ENST00000627232 RALGDSQ12967 914 aa21.7■■□□□ 1.06
PNKP-220ENST00000627232 KCNC3Q14003 757 aa21.7■■□□□ 1.06
PNKP-220ENST00000627232 KIF19Q2TAC6 998 aa21.7■■□□□ 1.06
PNKP-220ENST00000627232 RAVER1Q8IY67 606 aaKnown RBP21.7■■□□□ 1.06
PNKP-220ENST00000627232 CCDC124Q96CT7 223 aaKnown RBP21.7■■□□□ 1.06
PNKP-220ENST00000627232 DCUN1D1Q96GG9 259 aa21.7■■□□□ 1.06
PNKP-220ENST00000627232 NSUN3Q9H649 340 aaKnown RBP21.7■■□□□ 1.06
PNKP-220ENST00000627232 SDR39U1Q9NRG7 319 aaPredicted RBP21.7■■□□□ 1.06
PNKP-220ENST00000627232 CACNA2D2Q9NY47 1150 aa21.7■■□□□ 1.06
PNKP-220ENST00000627232 YBX2Q9Y2T7 364 aaKnown RBP21.7■■□□□ 1.06
PNKP-220ENST00000627232 KIAA1549LQ6ZVL6 1849 aa21.69■■□□□ 1.06
PNKP-220ENST00000627232 C16orf96A6NNT2 1141 aa21.69■■□□□ 1.06
PNKP-220ENST00000627232 NUAK1O60285 661 aa21.69■■□□□ 1.06
PNKP-220ENST00000627232 SORBS2O94875 1100 aaKnown RBP21.69■■□□□ 1.06
PNKP-220ENST00000627232 ENO2P09104 434 aaPredicted RBP21.69■■□□□ 1.06
PNKP-220ENST00000627232 CCR7P32248 378 aa21.69■■□□□ 1.06
PNKP-220ENST00000627232 SESN3P58005 492 aa21.69■■□□□ 1.06
PNKP-220ENST00000627232 ERVPABLB-1P60509 514 aa21.69■■□□□ 1.06
PNKP-220ENST00000627232 PHKG1Q16816 387 aa21.69■■□□□ 1.06
PNKP-220ENST00000627232 TCHHL1Q5QJ38 904 aaPredicted RBP21.69■■□□□ 1.06
PNKP-220ENST00000627232 PLEKHS1Q5SXH7 462 aa21.69■■□□□ 1.06
PNKP-220ENST00000627232 PAOXQ6QHF9 649 aa21.69■■□□□ 1.06
PNKP-220ENST00000627232 FUNDC1Q8IVP5 155 aa21.69■■□□□ 1.06
PNKP-220ENST00000627232 EFCAB3Q8N7B9 438 aa21.69■■□□□ 1.06
PNKP-220ENST00000627232 TSPEARQ8WU66 669 aa21.69■■□□□ 1.06
PNKP-220ENST00000627232 RHBDF1Q96CC6 855 aa21.69■■□□□ 1.06
PNKP-220ENST00000627232 EGFL8Q99944 293 aa21.69■■□□□ 1.06
PNKP-220ENST00000627232 ZSCAN5AQ9BUG6 496 aa21.69■■□□□ 1.06
PNKP-220ENST00000627232 CD244Q9BZW8 370 aa21.69■■□□□ 1.06
PNKP-220ENST00000627232 TRPV4Q9HBA0 871 aa21.69■■□□□ 1.06
PNKP-220ENST00000627232 TMEM45AQ9NWC5 275 aa21.69■■□□□ 1.06
PNKP-220ENST00000627232 WWOXQ9NZC7 414 aa21.69■■□□□ 1.06
PNKP-220ENST00000627232 CD84Q9UIB8 345 aa21.69■■□□□ 1.06
PNKP-220ENST00000627232 QSOX1O00391 747 aa21.68■■□□□ 1.06
PNKP-220ENST00000627232 OR7A17O14581 309 aa21.68■■□□□ 1.06
PNKP-220ENST00000627232 MRASO14807 208 aa21.68■■□□□ 1.06
PNKP-220ENST00000627232 PRNPP04156 253 aa21.68■■□□□ 1.06
PNKP-220ENST00000627232 C8GP07360 202 aa21.68■■□□□ 1.06
PNKP-220ENST00000627232 ME2P23368 584 aa21.68■■□□□ 1.06
PNKP-220ENST00000627232 PSME3P61289 254 aa21.68■■□□□ 1.06
PNKP-220ENST00000627232 CDKL1Q00532 357 aa21.68■■□□□ 1.06
PNKP-220ENST00000627232 EIF4HQ15056 248 aaKnown RBP21.68■■□□□ 1.06
PNKP-220ENST00000627232 GAB4Q2WGN9 574 aa21.68■■□□□ 1.06
PNKP-220ENST00000627232 C18orf21Q32NC0 220 aaPredicted RBP21.68■■□□□ 1.06
PNKP-220ENST00000627232 HENMT1Q5T8I9 393 aaKnown RBP21.68■■□□□ 1.06
PNKP-220ENST00000627232 ERAP2Q6P179 960 aa21.68■■□□□ 1.06
PNKP-220ENST00000627232 LETMD1Q6P1Q0 360 aa21.68■■□□□ 1.06
PNKP-220ENST00000627232 RNF165Q6ZSG1 346 aa21.68■■□□□ 1.06
PNKP-220ENST00000627232 TECPR1Q7Z6L1 1165 aa21.68■■□□□ 1.06
PNKP-220ENST00000627232 DDHD1Q8NEL9 900 aa21.68■■□□□ 1.06
PNKP-220ENST00000627232 OR52B6Q8NGF0 335 aa21.68■■□□□ 1.06
PNKP-220ENST00000627232 NRG4Q8WWG1 115 aa21.68■■□□□ 1.06
PNKP-220ENST00000627232 DLG3Q92796 817 aa21.68■■□□□ 1.06
PNKP-220ENST00000627232 ROPN1LQ96C74 230 aa21.68■■□□□ 1.06
PNKP-220ENST00000627232 CDCA3Q99618 268 aaPredicted RBP21.68■■□□□ 1.06
PNKP-220ENST00000627232 APOL5Q9BWW9 433 aa21.68■■□□□ 1.06
PNKP-220ENST00000627232 MTG2Q9H4K7 406 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms