RNA–Protein interactions for RNA: ENST00000624204.3

PMS1-221, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 3,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-221ENST00000624204 WBP11Q9Y2W2 641 aaKnown RBP15□□□□□ -0.01
PMS1-221ENST00000624204 TYW5A2RUC4 315 aaKnown RBP14.99□□□□□ -0.01
PMS1-221ENST00000624204 I6L893 689 aaPredicted RBP14.99□□□□□ -0.01
PMS1-221ENST00000624204 USP2O75604 605 aaPredicted RBP14.99□□□□□ -0.01
PMS1-221ENST00000624204 MAXP61244 160 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 AHSA2Q719I0 299 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 B3GNT8Q7Z7M8 397 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 FAM126BQ8IXS8 530 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 ELMOD2Q8IZ81 293 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 PARP16Q8N5Y8 322 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 CCDC177Q9NQR7 707 aaPredicted RBP14.99□□□□□ -0.01
PMS1-221ENST00000624204 PCDHB14Q9Y5E9 798 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 DNMT3AQ9Y6K1 912 aaPredicted RBP14.99□□□□□ -0.01
PMS1-221ENST00000624204 LRRC37AA6NMS7 1700 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 NUP214P35658 2090 aaPredicted RBP14.99□□□□□ -0.01
PMS1-221ENST00000624204 SUPT3HB4E1H0 165 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 AIREO43918 545 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 EEDO75530 441 aaKnown RBP14.99□□□□□ -0.01
PMS1-221ENST00000624204 CLCN5P51795 746 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 DGKQP52824 942 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 EMX2Q04743 252 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 SOWAHCQ53LP3 525 aaPredicted RBP14.99□□□□□ -0.01
PMS1-221ENST00000624204 ZNF544Q6NX49 715 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 TMEM179BQ7Z7N9 219 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 RDH12Q96NR8 316 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 VAT1Q99536 393 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 TNKS2Q9H2K2 1166 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 SLC52A3Q9NQ40 469 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 USE1Q9NZ43 259 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 LY75O60449 1722 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 ZNF831Q5JPB2 1677 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 AREL1O15033 823 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 PRKD3O94806 890 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 NDST3O95803 873 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 CYP11A1P05108 521 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 CD6P30203 668 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 CELF3Q5SZQ8 465 aaKnown RBP14.99□□□□□ -0.01
PMS1-221ENST00000624204 NXNL2Q5VZ03 156 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 SLC38A6Q8IZM9 456 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 IL17RDQ8NFM7 739 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 L3HYPDHQ96EM0 354 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 NPY6RQ99463 290 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 RPRD1BQ9NQG5 326 aaKnown RBP14.99□□□□□ -0.01
PMS1-221ENST00000624204 FBXO10Q9UK96 956 aa14.99□□□□□ -0.01
PMS1-221ENST00000624204 COL2A1P02458 1487 aaPredicted RBP14.99□□□□□ -0.01
PMS1-221ENST00000624204 UBA6A0AVT1 1052 aaPredicted RBP14.98□□□□□ -0.01
PMS1-221ENST00000624204 RGS10O43665 173 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 MED26O95402 600 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 CHRNEQ04844 493 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 CDK10Q15131 360 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 COQ5Q5HYK3 327 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 CES5AQ6NT32 575 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 DET1Q7L5Y6 550 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 OR8H2Q8N162 312 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 GIPC2Q8TF65 315 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 MED30Q96HR3 178 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 BCL7BQ9BQE9 202 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 MMP27Q9H306 513 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 SARS2Q9NP81 518 aaKnown RBP14.98□□□□□ -0.01
PMS1-221ENST00000624204 RGS18Q9NS28 235 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 SATB2Q9UPW6 733 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 TIMM13Q9Y5L4 95 aaPredicted RBP14.98□□□□□ -0.01
PMS1-221ENST00000624204 NRCAMQ92823 1304 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 EVPLLA8MZ36 301 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 PFKLP17858 780 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 PRDX3P30048 256 aaKnown RBP14.98□□□□□ -0.01
PMS1-221ENST00000624204 CACNB2Q08289 660 aaPredicted RBP14.98□□□□□ -0.01
PMS1-221ENST00000624204 SPATS1Q496A3 300 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 LYPD8Q6UX82 237 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 OR2T12Q8NG77 320 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 OR10A6Q8NH74 314 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 PYCR2Q96C36 320 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 CDK15Q96Q40 435 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 OR12D3Q9UGF7 316 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 OSGIN1Q9UJX0 560 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 ZBTB42B2RXF5 422 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 PRSS23O95084 383 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 PGK2P07205 417 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 AKAP5P24588 427 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 SGO1Q5FBB7 561 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 DENND5AQ6IQ26 1287 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 LRRC8DQ7L1W4 858 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 UBE2FQ969M7 185 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 SNX18Q96RF0 628 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 EHD3Q9NZN3 535 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 NIPSNAP3AQ9UFN0 247 aaPredicted RBP14.98□□□□□ -0.01
PMS1-221ENST00000624204 NAALAD2Q9Y3Q0 740 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 SCN1AP35498 2009 aa14.98□□□□□ -0.01
PMS1-221ENST00000624204 KRT87PA6NCN2 255 aa14.97□□□□□ -0.01
PMS1-221ENST00000624204 ANXA9O76027 345 aa14.97□□□□□ -0.01
PMS1-221ENST00000624204 DCTP40126 519 aa14.97□□□□□ -0.01
PMS1-221ENST00000624204 PIK3CGP48736 1102 aa14.97□□□□□ -0.01
PMS1-221ENST00000624204 SLC26A2P50443 739 aa14.97□□□□□ -0.01
PMS1-221ENST00000624204 GALK2Q01415 458 aa14.97□□□□□ -0.01
PMS1-221ENST00000624204 PRKG2Q13237 762 aa14.97□□□□□ -0.01
PMS1-221ENST00000624204 SYT6Q5T7P8 510 aaPredicted RBP14.97□□□□□ -0.01
PMS1-221ENST00000624204 KANK2Q63ZY3 851 aa14.97□□□□□ -0.01
PMS1-221ENST00000624204 KIAA0930Q6ICG6 404 aaPredicted RBP14.97□□□□□ -0.01
PMS1-221ENST00000624204 AMER2Q8N7J2 671 aa14.97□□□□□ -0.01
PMS1-221ENST00000624204 RNF167Q9H6Y7 350 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms