RNA–Protein interactions for RNA: ENST00000617904.4

TRAPPC3-210, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2 BASIC

Gene TRAPPC3, Length 1,305 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-210ENST00000617904 PLEKHS1Q5SXH7 462 aa16.54■□□□□ 0.24
TRAPPC3-210ENST00000617904 ZCCHC23Q6ZST2 131 aa16.54■□□□□ 0.24
TRAPPC3-210ENST00000617904 ISCA2Q86U28 154 aa16.54■□□□□ 0.24
TRAPPC3-210ENST00000617904 LONP2Q86WA8 852 aa16.54■□□□□ 0.24
TRAPPC3-210ENST00000617904 GPSM1Q86YR5 675 aa16.54■□□□□ 0.24
TRAPPC3-210ENST00000617904 FBXO39Q8N4B4 442 aa16.54■□□□□ 0.24
TRAPPC3-210ENST00000617904 TUBB6Q9BUF5 446 aa16.54■□□□□ 0.24
TRAPPC3-210ENST00000617904 ZDHHC4Q9NPG8 344 aa16.54■□□□□ 0.24
TRAPPC3-210ENST00000617904 MRGBPQ9NV56 204 aa16.54■□□□□ 0.24
TRAPPC3-210ENST00000617904 TNPO3Q9Y5L0 923 aaKnown RBP16.54■□□□□ 0.24
TRAPPC3-210ENST00000617904 FADS3Q9Y5Q0 445 aa16.54■□□□□ 0.24
TRAPPC3-210ENST00000617904 MUC22E2RYF6 1773 aaPredicted RBP16.54■□□□□ 0.24
TRAPPC3-210ENST00000617904 A0A0G2JND7 137 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 TARM1B6A8C7 271 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 DLX3O60479 287 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 CCDC22O60826 627 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 ATG13O75143 517 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 RECQL5O94762 991 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 KLF8O95600 359 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 IMPDH1P20839 514 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 HOXA6P31267 233 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 CNR2P34972 360 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 CLCN7P51798 805 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 NAGLUP54802 743 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 CREB5Q02930 508 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 CNTN1Q12860 1018 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 SGCGQ13326 291 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 SYTL3Q4VX76 610 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 RAET1GQ6H3X3 334 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 KIAA1161Q6NSJ0 714 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 TRPM8Q7Z2W7 1104 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 SYNPOQ8N3V7 929 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 SPATA6LQ8N4H0 392 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 ANKRD49Q8WVL7 239 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 ASZ1Q8WWH4 475 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 SGF29Q96ES7 293 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 LRRC37BQ96QE4 947 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 ACOX2Q99424 681 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 GATA5Q9BWX5 397 aaPredicted RBP16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 NUDT4Q9NZJ9 180 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 CD274Q9NZQ7 290 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 CDV3Q9UKY7 258 aaKnown RBP16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 DNAJC16Q9Y2G8 782 aa16.53■□□□□ 0.24
TRAPPC3-210ENST00000617904 CCT8L1PA6NM43 557 aa16.52■□□□□ 0.24
TRAPPC3-210ENST00000617904 A8MT66 165 aa16.52■□□□□ 0.24
TRAPPC3-210ENST00000617904 MID1O15344 667 aa16.52■□□□□ 0.24
TRAPPC3-210ENST00000617904 ZBTB14O43829 449 aa16.52■□□□□ 0.24
TRAPPC3-210ENST00000617904 VEGFDO43915 354 aa16.52■□□□□ 0.24
TRAPPC3-210ENST00000617904 LRP3O75074 770 aa16.52■□□□□ 0.24
TRAPPC3-210ENST00000617904 RNASEH2AO75792 299 aaKnown RBP16.52■□□□□ 0.24
TRAPPC3-210ENST00000617904 RPS21P63220 83 aaKnown RBP16.52■□□□□ 0.24
TRAPPC3-210ENST00000617904 PLOD1Q02809 727 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC3-210ENST00000617904 GALNT1Q10472 559 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC3-210ENST00000617904 OVGP1Q12889 678 aa16.52■□□□□ 0.24
TRAPPC3-210ENST00000617904 NAIF1Q69YI7 327 aaPredicted RBP16.52■□□□□ 0.24
TRAPPC3-210ENST00000617904 NEK5Q6P3R8 708 aa16.52■□□□□ 0.24
TRAPPC3-210ENST00000617904 CPNE9Q8IYJ1 553 aa16.52■□□□□ 0.24
TRAPPC3-210ENST00000617904 EEF1AKMT1Q8WVE0 214 aa16.52■□□□□ 0.24
TRAPPC3-210ENST00000617904 SCAMP4Q969E2 229 aa16.52■□□□□ 0.24
TRAPPC3-210ENST00000617904 FAM136AQ96C01 138 aa16.52■□□□□ 0.24
TRAPPC3-210ENST00000617904 L3HYPDHQ96EM0 354 aa16.52■□□□□ 0.24
TRAPPC3-210ENST00000617904 RILPQ96NA2 401 aa16.52■□□□□ 0.24
TRAPPC3-210ENST00000617904 RTKNQ9BST9 563 aa16.52■□□□□ 0.24
TRAPPC3-210ENST00000617904 KDM4CQ9H3R0 1056 aa16.52■□□□□ 0.24
TRAPPC3-210ENST00000617904 DCTN4Q9UJW0 460 aa16.52■□□□□ 0.24
TRAPPC3-210ENST00000617904 FZD4Q9ULV1 537 aa16.52■□□□□ 0.24
TRAPPC3-210ENST00000617904 NCOR2Q9Y618 2525 aa16.52■□□□□ 0.24
TRAPPC3-210ENST00000617904 GOLGA8QA0A0J9YX86 632 aa16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 DCDC2BA2VCK2 349 aa16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 GOLGA8OA6NCC3 632 aa16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 KLHL33A6NCF5 533 aa16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 TRPC5OSA6NMA1 111 aa16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 GOLGA8NF8WBI6 632 aa16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 STX16-NPEPL1H3BU86 382 aa16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 STX16O14662 325 aa16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 MMP20O60882 483 aa16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 ATP5HO75947 161 aa16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 EGFP01133 1207 aa16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 C8GP07360 202 aa16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 ENO2P09104 434 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 HIST1H2AGP0C0S8 130 aaPredicted RBP16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 MPC1LP0DKB6 136 aa16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 HIST1H2ADP20671 130 aa16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 RPL14P50914 215 aaKnown RBP16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 RPS14P62263 151 aaKnown RBP16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 HERVK_113P63132 956 aa16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 TMEM207Q6UWW9 146 aa16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 NEK10Q6ZWH5 1172 aa16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 USP30Q70CQ3 517 aa16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 EFL1Q7Z2Z2 1120 aaKnown RBP16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 WDR5BQ86VZ2 330 aa16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 CLDN19Q8N6F1 224 aa16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 IL17RCQ8NAC3 791 aa16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 TXNDC5Q8NBS9 432 aaKnown RBP16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 EXT2Q93063 718 aa16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 SIPA1Q96FS4 1042 aa16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 HIST1H2AHQ96KK5 128 aa16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 FOPNLQ96NB1 174 aa16.51■□□□□ 0.23
TRAPPC3-210ENST00000617904 HIST1H2AJQ99878 128 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms