RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 SHKBP1Q8TBC3 707 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 ATL1Q8WXF7 558 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 MAGED4Q96JG8 741 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 TNKS2Q9H2K2 1166 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 GSTO2Q9H4Y5 243 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 CD320Q9NPF0 282 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 AASDHPPTQ9NRN7 309 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 AP3M1Q9Y2T2 418 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 ELOVL7A1L3X0 281 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 ZNF195O14628 629 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 AQP1P29972 269 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 AGTR2P50052 363 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 CDKN2DP55273 166 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 UFM1P61960 85 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 HIST2H2ACQ16777 129 aaPredicted RBP5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 ZNF423Q2M1K9 1284 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 CNPY1Q3B7I2 92 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 OGFRL1Q5TC84 451 aaPredicted RBP5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 HIST2H2AA3Q6FI13 130 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 OGFOD2Q6N063 350 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 LIMS2Q7Z4I7 341 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 METTL3Q86U44 580 aaKnown RBP5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 HORMAD1Q86X24 394 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 TRAPPC5Q8IUR0 188 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 DCAF4L2Q8NA75 395 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 GLB1L3Q8NCI6 653 aaPredicted RBP5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 ATOH8Q96SQ7 321 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 DERL2Q9GZP9 239 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 NOL6Q9H6R4 1146 aaKnown RBP5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 TMEM39AQ9NV64 488 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 POLR3BQ9NW08 1133 aaPredicted RBP5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 KCTD5Q9NXV2 234 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 SNX6Q9UNH7 406 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 C5orf58C9J3I9 102 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 HHLA1C9JL84 531 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 K7EPI3 171 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 NME4O00746 187 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 ZSCAN9O15535 394 aaPredicted RBP5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 GPR39O43194 453 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 INHAP05111 366 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 SERPIND1P05546 499 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 GJA1P17302 382 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 PRDX3P30048 256 aaKnown RBP5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 SERPINB10P48595 397 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 ARMC3Q5W041 872 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 TRMT11Q7Z4G4 463 aaKnown RBP5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 LILRA2Q8N149 483 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 MARVELD2Q8N4S9 558 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 SETD9Q8NE22 299 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 UTP15Q8TED0 518 aaKnown RBP5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 PTERQ96BW5 349 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 AURKBQ96GD4 344 aaPredicted RBP5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 LIN28AQ9H9Z2 209 aaKnown RBP5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 AMBNQ9NP70 447 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 ASAH2Q9NR71 780 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 NUDT4Q9NZJ9 180 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 ADGRE2Q9UHX3 823 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 TLL2Q9Y6L7 1015 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 PIEZO1Q92508 2521 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 A0A1W2PPW3 197 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 FAM234BA2RU67 622 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 OR2AG2A6NM03 316 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 ARVCFO00192 962 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 STC2O76061 302 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 PRKD3O94806 890 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 ADH1AP07327 375 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 FGF4P08620 206 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 UMPSP11172 480 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 SPAM1P38567 509 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 INHBCP55103 352 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 RPS14P62263 151 aaKnown RBP5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 AGERQ15109 404 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 TRIM16LQ309B1 348 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 PTCHD3Q3KNS1 767 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 SLC44A4Q53GD3 710 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 NANOGP8Q6NSW7 305 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 COLGALT2Q8IYK4 626 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 C3orf30Q96M34 536 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 ZDHHC6Q9H6R6 413 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 REEP1Q9H902 201 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 NANOGQ9H9S0 305 aa5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 SAMHD1Q9Y3Z3 626 aaKnown RBP5.56□□□□□ -1.52
SYNCRIP-204ENST00000616122 MTX2O75431 263 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 ERN1O75460 977 aaKnown RBP5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 KCNH1O95259 989 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 KLKB1P03952 638 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 PGRP06401 933 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 COX7A2P14406 83 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 ADARP55265 1226 aaKnown RBP5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 KCTD21Q4G0X4 260 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 CST9Q5W186 159 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 CYP20A1Q6UW02 462 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 RNF19BQ6ZMZ0 732 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 UBE2R2Q712K3 238 aaPredicted RBP5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 OR4F6Q8NGB9 312 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 AUTS2Q8WXX7 1259 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 SCAMP4Q969E2 229 aa5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 MTERF1Q99551 399 aaKnown RBP5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 CCM2LQ9NUG4 571 aaPredicted RBP5.55□□□□□ -1.52
SYNCRIP-204ENST00000616122 INTS7Q9NVH2 962 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms