RNA–Protein interactions for RNA: ENST00000615901.4

SPTBN1-207, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 5 BASIC

Gene SPTBN1, Length 10,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-207ENST00000615901 LIPEQ05469 1076 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 PAFAH1B3Q15102 231 aaKnown RBP9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 RELL1Q8IUW5 271 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 RGL4Q8IZJ4 473 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 ERLEC1Q96DZ1 483 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 MCMBPQ9BTE3 642 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 MTRRQ9UBK8 725 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 SRRDQ9UH36 339 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 PRG2P13727 222 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 ERVK-21P61565 698 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 SP140Q13342 867 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 WDR55Q9H6Y2 383 aaPredicted RBP9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 FAM234BA2RU67 622 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 SLC25A12O75746 678 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 CDK14O94921 469 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 ECDO95905 644 aaPredicted RBP9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 ANXA4P09525 319 aaPredicted RBP9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 PLA2G4EQ3MJ16 856 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 PRSS55Q6UWB4 352 aaPredicted RBP9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 RINLQ6ZS11 566 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 TMEM192Q8IY95 271 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 KLHL23Q8NBE8 558 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 MAFFQ9ULX9 164 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 NHSQ6T4R5 1651 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 KERAO60938 352 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 CDH13P55290 713 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 PRKD1Q15139 912 aaPredicted RBP9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 ZNF57Q68EA5 555 aaPredicted RBP9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 ZNF781Q8N8C0 355 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 AVL9Q8NBF6 648 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 DCAKDQ8WVC6 231 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 SNRNP27Q8WVK2 155 aaKnown RBP9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 NUS1Q96E22 293 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 ZHX1-C8orf76Q96EF9 292 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 BTBD9Q96Q07 612 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 TIMMDC1Q9NPL8 285 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 ITM2CQ9NQX7 267 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 YIPF1Q9Y548 306 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 CHURC1-FNTBB4DL54 471 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 PCCBP05166 539 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 IGFBP4P22692 258 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 RPL4P36578 427 aaKnown RBP9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 VPS26BQ4G0F5 336 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 RNF44Q7L0R7 432 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 THAP5Q7Z6K1 395 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 RBM23Q86U06 439 aaKnown RBP9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 SCAMP5Q8TAC9 235 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 S100A13Q99584 98 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 C1orf109Q9NX04 203 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 SEC14L3Q9UDX4 400 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 PCDHGA4Q9Y5G9 962 aa9.02□□□□□ -0.97
SPTBN1-207ENST00000615901 AGPSO00116 658 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 ADAMTS3O15072 1205 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 RGS21Q2M5E4 152 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 IL23RQ5VWK5 629 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 PDPRQ8NCN5 879 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 PPM1MQ96MI6 270 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 GATA5Q9BWX5 397 aaPredicted RBP9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 TLL2Q9Y6L7 1015 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 ABHD14A-ACY1A0A1B0GW23 586 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 SEC24AO95486 1093 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 ZNF37AP17032 561 aaPredicted RBP9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 UGT1A5P35504 534 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 PIK3CBP42338 1070 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 USP46P62068 366 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 RALGDSQ12967 914 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 NAE1Q13564 534 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 CARD16Q5EG05 197 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 OR10G6Q8NH81 332 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 PNPT1Q8TCS8 783 aaKnown RBP9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 SLC35F5Q8WV83 523 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 USP29Q9HBJ7 922 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 ZSCAN32Q9NX65 697 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 SUCOQ9UBS9 1254 aaKnown RBP9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 TRIP11Q15643 1979 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 FAM86C2PA6NEL3 165 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 CHST10O43529 356 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 PAPSS2O95340 614 aaPredicted RBP9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 HLA-DQA2P01906 255 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 ALOX12P18054 663 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 LARS2Q15031 903 aaKnown RBP9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 NDUFAF6Q330K2 333 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 ZIK1Q3SY52 487 aaPredicted RBP9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 RANBP3LQ86VV4 465 aaPredicted RBP9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 LIX1Q8N485 282 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 RIT1Q92963 219 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 C11orf49Q9H6J7 331 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 MCM8Q9UJA3 840 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 HS3ST4Q9Y661 456 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 ERAL1O75616 437 aaKnown RBP9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 BMP7P18075 431 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 MAPK12P53778 367 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 EIPR1Q53HC9 387 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 CLEC6AQ6EIG7 209 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 PRR23BQ6ZRT6 265 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 SLC35G6P0C7Q6 338 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 IMPDH1P20839 514 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 IGFBP5P24593 272 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 GJA9P57773 515 aa9.01□□□□□ -0.97
SPTBN1-207ENST00000615901 SH3PXD2AQ5TCZ1 1133 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms