RNA–Protein interactions for RNA: ENST00000613138.1

CSTF1-208, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 4

Gene CSTF1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-208ENST00000613138 TMEM26Q6ZUK4 368 aa12.41□□□□□ -0.42
CSTF1-208ENST00000613138 TRIM48Q8IWZ4 208 aa12.41□□□□□ -0.42
CSTF1-208ENST00000613138 CFAP206Q8IYR0 622 aa12.41□□□□□ -0.42
CSTF1-208ENST00000613138 AGGF1Q8N302 714 aaeCLIP12.41□□□□□ -0.42
CSTF1-208ENST00000613138 ACTRT1Q8TDG2 376 aa12.41□□□□□ -0.42
CSTF1-208ENST00000613138 CPT1BQ92523 772 aa12.41□□□□□ -0.42
CSTF1-208ENST00000613138 ANP32BQ92688 251 aaKnown RBP12.41□□□□□ -0.42
CSTF1-208ENST00000613138 ULK4Q96C45 1275 aa12.41□□□□□ -0.42
CSTF1-208ENST00000613138 LRRC45Q96CN5 670 aa12.41□□□□□ -0.42
CSTF1-208ENST00000613138 DCUN1D1Q96GG9 259 aa12.41□□□□□ -0.42
CSTF1-208ENST00000613138 AHCYL2Q96HN2 611 aaKnown RBP12.41□□□□□ -0.42
CSTF1-208ENST00000613138 TMEM74Q96NL1 305 aa12.41□□□□□ -0.42
CSTF1-208ENST00000613138 COPS8Q99627 209 aa12.41□□□□□ -0.42
CSTF1-208ENST00000613138 ZCCHC2Q9C0B9 1178 aaKnown RBP12.41□□□□□ -0.42
CSTF1-208ENST00000613138 DDX47Q9H0S4 455 aaKnown RBP12.41□□□□□ -0.42
CSTF1-208ENST00000613138 EIF2B3Q9NR50 452 aaKnown RBP12.41□□□□□ -0.42
CSTF1-208ENST00000613138 OCIAD1Q9NX40 245 aa12.41□□□□□ -0.42
CSTF1-208ENST00000613138 FOXJ2Q9P0K8 574 aa12.41□□□□□ -0.42
CSTF1-208ENST00000613138 HEATR9A2RTY3 570 aa12.4□□□□□ -0.42
CSTF1-208ENST00000613138 MGAT4DA6NG13 374 aa12.4□□□□□ -0.42
CSTF1-208ENST00000613138 CDRT15L2A8MXV6 281 aa12.4□□□□□ -0.42
CSTF1-208ENST00000613138 TMX2-CTNND1H3BSU7 103 aa12.4□□□□□ -0.42
CSTF1-208ENST00000613138 KIF1CO43896 1103 aaKnown RBP12.4□□□□□ -0.42
CSTF1-208ENST00000613138 PRAMEF10O60809 474 aa12.4□□□□□ -0.42
CSTF1-208ENST00000613138 PHF2O75151 1096 aa12.4□□□□□ -0.42
CSTF1-208ENST00000613138 THRAP10827 490 aa12.4□□□□□ -0.42
CSTF1-208ENST00000613138 XRCC1P18887 633 aaPredicted RBP12.4□□□□□ -0.42
CSTF1-208ENST00000613138 ADRA1DP25100 572 aa12.4□□□□□ -0.42
CSTF1-208ENST00000613138 ARNTP27540 789 aa12.4□□□□□ -0.42
CSTF1-208ENST00000613138 ARCN1P48444 511 aaKnown RBP12.4□□□□□ -0.42
CSTF1-208ENST00000613138 LIMK2P53671 638 aa12.4□□□□□ -0.42
CSTF1-208ENST00000613138 MRPS25P82663 173 aaKnown RBP12.4□□□□□ -0.42
CSTF1-208ENST00000613138 DMPKQ09013 629 aa12.4□□□□□ -0.42
CSTF1-208ENST00000613138 TGIF1Q15583 401 aa12.4□□□□□ -0.42
CSTF1-208ENST00000613138 SKIDA1Q1XH10 827 aa12.4□□□□□ -0.42
CSTF1-208ENST00000613138 AGAP9Q5VTM2 703 aa12.4□□□□□ -0.42
CSTF1-208ENST00000613138 METRNLQ641Q3 311 aa12.4□□□□□ -0.42
CSTF1-208ENST00000613138 CAND1Q86VP6 1230 aaKnown RBP12.4□□□□□ -0.42
CSTF1-208ENST00000613138 JAMLQ86YT9 394 aa12.4□□□□□ -0.42
CSTF1-208ENST00000613138 LSMEM2Q8N112 164 aa12.4□□□□□ -0.42
CSTF1-208ENST00000613138 OR6P1Q8NGX9 317 aa12.4□□□□□ -0.42
CSTF1-208ENST00000613138 OR2L2Q8NH16 312 aa12.4□□□□□ -0.42
CSTF1-208ENST00000613138 FGF11Q92914 225 aa12.4□□□□□ -0.42
CSTF1-208ENST00000613138 CXorf40BQ96DE9 158 aa12.4□□□□□ -0.42
CSTF1-208ENST00000613138 MFSD3Q96ES6 412 aa12.4□□□□□ -0.42
CSTF1-208ENST00000613138 C12orf66Q96MD2 445 aa12.4□□□□□ -0.42
CSTF1-208ENST00000613138 RANBP9Q96S59 729 aa12.4□□□□□ -0.42
CSTF1-208ENST00000613138 SLC40A1Q9NP59 571 aa12.4□□□□□ -0.42
CSTF1-208ENST00000613138 IMP3Q9NV31 184 aaKnown RBP12.4□□□□□ -0.42
CSTF1-208ENST00000613138 LILRA5A6NI73 299 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 IQCF5A8MTL0 148 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 C9orf172C9J069 976 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 DUX1O43812 170 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 BANF1O75531 89 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 DXOO77932 396 aaKnown RBP12.39□□□□□ -0.43
CSTF1-208ENST00000613138 FGF3P11487 239 aaPredicted RBP12.39□□□□□ -0.43
CSTF1-208ENST00000613138 TPSB2P20231 275 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 RBMS1P29558 406 aaKnown RBP12.39□□□□□ -0.43
CSTF1-208ENST00000613138 SLC5A2P31639 672 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 CSE1LP55060 971 aaKnown RBP12.39□□□□□ -0.43
CSTF1-208ENST00000613138 ACVR1Q04771 509 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 TPSAB1Q15661 275 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 GPR33Q49SQ1 333 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 TMEM71Q6P5X7 295 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 WASH2PQ6VEQ5 465 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 ZFAND4Q86XD8 727 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 CREG2Q8IUH2 290 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 SPACA3Q8IXA5 215 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 PHC3Q8NDX5 983 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 PPHLN1Q8NEY8 458 aaKnown RBP12.39□□□□□ -0.43
CSTF1-208ENST00000613138 OR4D9Q8NGE8 314 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 OR10G6Q8NH81 332 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 SNIP1Q8TAD8 396 aaKnown RBP12.39□□□□□ -0.43
CSTF1-208ENST00000613138 USP7Q93009 1102 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 PPM1MQ96MI6 270 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 TGM7Q96PF1 710 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 CTRCQ99895 268 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 STRADBQ9C0K7 418 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 COG4Q9H9E3 785 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 WASH6PQ9NQA3 447 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 TREX1Q9NSU2 369 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 WDR70Q9NW82 654 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 PCDHGA8Q9Y5G5 932 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 ANKRD12Q6UB98 2062 aa12.39□□□□□ -0.43
CSTF1-208ENST00000613138 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.38□□□□□ -0.43
CSTF1-208ENST00000613138 OR5K4A6NMS3 321 aa12.38□□□□□ -0.43
CSTF1-208ENST00000613138 EFCAB7A8K855 629 aa12.38□□□□□ -0.43
CSTF1-208ENST00000613138 UBXN7O94888 489 aa12.38□□□□□ -0.43
CSTF1-208ENST00000613138 JMJD7P0C870 316 aa12.38□□□□□ -0.43
CSTF1-208ENST00000613138 MTHFD1P11586 935 aaKnown RBP12.38□□□□□ -0.43
CSTF1-208ENST00000613138 SLC2A4P14672 509 aa12.38□□□□□ -0.43
CSTF1-208ENST00000613138 VCLP18206 1134 aa12.38□□□□□ -0.43
CSTF1-208ENST00000613138 PTGIRP43119 386 aa12.38□□□□□ -0.43
CSTF1-208ENST00000613138 SEPHS1P49903 392 aa12.38□□□□□ -0.43
CSTF1-208ENST00000613138 GPLD1P80108 840 aa12.38□□□□□ -0.43
CSTF1-208ENST00000613138 PCID2Q5JVF3 399 aa12.38□□□□□ -0.43
CSTF1-208ENST00000613138 PAPD7Q5XG87 772 aaKnown RBP12.38□□□□□ -0.43
CSTF1-208ENST00000613138 LRRC8BQ6P9F7 803 aa12.38□□□□□ -0.43
CSTF1-208ENST00000613138 FBXO38Q6PIJ6 1188 aa12.38□□□□□ -0.43
CSTF1-208ENST00000613138 AFTPHQ6ULP2 937 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms