RNA–Protein interactions for RNA: ENST00000612558.4

CCDC47-207, Transcript of coiled-coil domain containing 47, humanhuman

TSL 5 BASIC

Gene CCDC47, Length 1,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-207ENST00000612558 TMEM196Q5HYL7 178 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 LDLRAP1Q5SW96 308 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 ZNF678Q5SXM1 525 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 LSMEM2Q8N112 164 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 ZBTB2Q8N680 514 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 ZNF781Q8N8C0 355 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 LKAAEAR1Q8TD35 194 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 DNASE1L2Q92874 299 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 GLYATL1Q969I3 302 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 MOCOSQ96EN8 888 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 FAM161BQ96MY7 647 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 TMEM237Q96Q45 408 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 GABRG3Q99928 467 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 TRMOQ9BU70 441 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 ERVK-6Q9BXR3 956 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 UBE2ZQ9H832 354 aaPredicted RBP8.78□□□□□ -1
CCDC47-207ENST00000612558 FBRSQ9HAH7 460 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 DNAJC28Q9NX36 388 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 KCTD5Q9NXV2 234 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 HEY2Q9UBP5 337 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 IKZF3Q9UKT9 509 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 FADS3Q9Y5Q0 445 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 PIAS3Q9Y6X2 628 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 XIRP2A4UGR9 3374 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 LRRK1Q38SD2 2015 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 NPEPPSL1A6NEC2 478 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 FADS2P1A8MWK0 482 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 SUPT3HB4E1H0 165 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 SLCO1B7G3V0H7 640 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 EIF3FO00303 357 aaPredicted RBP8.78□□□□□ -1
CCDC47-207ENST00000612558 QSOX1O00391 747 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 KPNA5O15131 536 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 MID1O15344 667 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 TSPAN6O43657 245 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 AP1G1O43747 822 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 KLK8O60259 260 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 MMP20O60882 483 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 SUPT3HO75486 399 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 RECQL5O94762 991 aaPredicted RBP8.78□□□□□ -1
CCDC47-207ENST00000612558 SUPT7LO94864 414 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 EGFP01133 1207 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 C6P13671 934 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 GFAPP14136 432 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 GLULP15104 373 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 MSH3P20585 1137 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 DRD3P35462 400 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 NAA20P61599 178 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 ZBTB16Q05516 673 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 DPTQ07507 201 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 GRSF1Q12849 480 aaKnown RBP eCLIP8.78□□□□□ -1
CCDC47-207ENST00000612558 STARD3Q14849 445 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 PON2Q15165 354 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 PFKFB4Q16877 469 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 GALNTL6Q49A17 601 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 UNC50Q53HI1 259 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 C2orf27AQ580R0 203 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 RNFT1Q5M7Z0 435 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 SPDYAQ5MJ70 313 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 PIP5KL1Q5T9C9 394 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 ZNF776Q68DI1 518 aaPredicted RBP8.78□□□□□ -1
CCDC47-207ENST00000612558 TRMT11Q7Z4G4 463 aaKnown RBP8.78□□□□□ -1
CCDC47-207ENST00000612558 ADAMTSL2Q86TH1 951 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 MTDHQ86UE4 582 aaKnown RBP8.78□□□□□ -1
CCDC47-207ENST00000612558 GPSM1Q86YR5 675 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 KIRREL3Q8IZU9 778 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 MYO1HQ8N1T3 1032 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 FBXO39Q8N4B4 442 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 PTGR2Q8N8N7 351 aaPredicted RBP8.78□□□□□ -1
CCDC47-207ENST00000612558 OR2T3Q8NH03 318 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 CXorf40AQ8TE69 158 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 NAT14Q8WUY8 206 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 EXT2Q93063 718 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 ERP27Q96DN0 273 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 NUS1Q96E22 293 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 ASB2Q96Q27 587 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 PHF7Q9BWX1 381 aaPredicted RBP8.78□□□□□ -1
CCDC47-207ENST00000612558 ACSS2Q9NR19 701 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 ENAMQ9NRM1 1142 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 HEBP1Q9NRV9 189 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 VTI1BQ9UEU0 232 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 ZFP69BQ9UJL9 534 aa8.78□□□□□ -1
CCDC47-207ENST00000612558 TRPM6Q9BX84 2022 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 STX16-NPEPL1H3BU86 382 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 MATN2O00339 956 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 ZNF195O14628 629 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 STX16O14662 325 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 HGSO14964 777 aaPredicted RBP8.77□□□□□ -1.01
CCDC47-207ENST00000612558 HDAC3O15379 428 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 SNX2O60749 519 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 MTX2O75431 263 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 UBOX5O94941 541 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 FTH1P02794 183 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 ENO3P13929 434 aaPredicted RBP8.77□□□□□ -1.01
CCDC47-207ENST00000612558 MPSTP25325 297 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 AOAHP28039 575 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 SERPINB3P29508 390 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 CCR7P32248 378 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 CCR10P46092 362 aa8.77□□□□□ -1.01
CCDC47-207ENST00000612558 MRPS21P82921 87 aaKnown RBP8.77□□□□□ -1.01
CCDC47-207ENST00000612558 BNIP1Q12981 228 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms