RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.48□□□□□ -0.25
VRK3-219ENST00000600137 UBAP2Q5T6F2 1119 aaKnown RBP13.48□□□□□ -0.25
VRK3-219ENST00000600137 N4BP2L1Q5TBK1 243 aaPredicted RBP13.48□□□□□ -0.25
VRK3-219ENST00000600137 ZNF470Q6ECI4 717 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 CAPRIN2Q6IMN6 1127 aaKnown RBP13.48□□□□□ -0.25
VRK3-219ENST00000600137 MRNIPQ6NTE8 343 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 CYS1Q717R9 158 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 ZNF438Q7Z4V0 828 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 SDCCAG8Q86SQ7 713 aaPredicted RBP13.48□□□□□ -0.25
VRK3-219ENST00000600137 SPNS2Q8IVW8 549 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 LMNTD2Q8IXW0 634 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 CFAP206Q8IYR0 622 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 C2CD4AQ8NCU7 369 aaPredicted RBP13.48□□□□□ -0.25
VRK3-219ENST00000600137 SLC37A2Q8TED4 501 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 CERS2Q96G23 380 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 CFAP36Q96G28 342 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 OR52A5Q9H2C5 316 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 IARS2Q9NSE4 1012 aaKnown RBP13.48□□□□□ -0.25
VRK3-219ENST00000600137 SLC17A6Q9P2U8 582 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 GALPQ9UBC7 116 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 FBXO5Q9UKT4 447 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 WASF3Q9UPY6 502 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 CDYLQ9Y232 598 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 PCDHGA1Q9Y5H4 931 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 RNF215Q9Y6U7 377 aa13.48□□□□□ -0.25
VRK3-219ENST00000600137 PTPRBP23467 1997 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 KLHL33A6NCF5 533 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 B4GAT1O43505 415 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 SNX2O60749 519 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 GPC4O75487 556 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 NDUFS3O75489 264 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 AHSGP02765 367 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 RHOXF2BP0C7M4 288 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 GLB1P16278 677 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 XRCC1P18887 633 aaPredicted RBP13.47□□□□□ -0.25
VRK3-219ENST00000600137 IDSP22304 550 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 PDHA2P29803 388 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 PBLDP30039 288 aaPredicted RBP13.47□□□□□ -0.25
VRK3-219ENST00000600137 CCR7P32248 378 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 PPARGP37231 505 aaPredicted RBP13.47□□□□□ -0.25
VRK3-219ENST00000600137 MAGEA4P43358 317 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 FASLGP48023 281 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 UBE2IP63279 158 aaKnown RBP13.47□□□□□ -0.25
VRK3-219ENST00000600137 MPP1Q00013 466 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 TIAL1Q01085 375 aaKnown RBP eCLIP13.47□□□□□ -0.25
VRK3-219ENST00000600137 THOC5Q13769 683 aaKnown RBP13.47□□□□□ -0.25
VRK3-219ENST00000600137 NR1D2Q14995 579 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 NR0B2Q15466 257 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 CNSTQ6PJW8 725 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 NAPRTQ6XQN6 538 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 LRRC6Q86X45 466 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 RELL1Q8IUW5 271 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 KRT222Q8N1A0 295 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 SPDYE1Q8NFV5 336 aaPredicted RBP13.47□□□□□ -0.25
VRK3-219ENST00000600137 HM13Q8TCT9 377 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 PYROXD1Q8WU10 500 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 C9orf72Q96LT7 481 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 INSM2Q96T92 566 aaPredicted RBP13.47□□□□□ -0.25
VRK3-219ENST00000600137 TTC1Q99614 292 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 RHOXF2Q9BQY4 288 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 MCMBPQ9BTE3 642 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 FAM129AQ9BZQ8 928 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 OSGEPL1Q9H4B0 414 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 COG4Q9H9E3 785 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 LRRC4CQ9HCJ2 640 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 FBXO6Q9NRD1 293 aaPredicted RBP13.47□□□□□ -0.25
VRK3-219ENST00000600137 LATS2Q9NRM7 1088 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 INTS10Q9NVR2 710 aaKnown RBP13.47□□□□□ -0.25
VRK3-219ENST00000600137 NCKIPSDQ9NZQ3 722 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 CRYL1Q9Y2S2 319 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 NCOR2Q9Y618 2525 aa13.47□□□□□ -0.25
VRK3-219ENST00000600137 CPED1A4D0V7 1026 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 OR5K4A6NMS3 321 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 OR52A4PA6NMU1 304 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 QSOX1O00391 747 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 NUDT21O43809 227 aaKnown RBP13.46□□□□□ -0.25
VRK3-219ENST00000600137 GP1BAP07359 652 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 GSTM1P09488 218 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 OR56A5P0C7T3 313 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 PNLIPP16233 465 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 AOAHP28039 575 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 PMLP29590 882 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 FMO4P31512 558 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 RPIAP49247 311 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 DUSP3P51452 185 aaPredicted RBP13.46□□□□□ -0.25
VRK3-219ENST00000600137 DAB2P98082 770 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 GSTM4Q03013 218 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 ILKQ13418 452 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 DNTTIP2Q5QJE6 756 aaKnown RBP13.46□□□□□ -0.25
VRK3-219ENST00000600137 EFL1Q7Z2Z2 1120 aaKnown RBP13.46□□□□□ -0.25
VRK3-219ENST00000600137 GALNT7Q86SF2 657 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 GSDMBQ8TAX9 411 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 IFI44Q8TCB0 444 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 CALML6Q8TD86 181 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 ADAMTS14Q8WXS8 1223 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 IFT81Q8WYA0 676 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 GLMNQ92990 594 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 RMDN2Q96LZ7 410 aa13.46□□□□□ -0.25
VRK3-219ENST00000600137 SARS2Q9NP81 518 aaKnown RBP13.46□□□□□ -0.25
VRK3-219ENST00000600137 LRIT1Q9P2V4 623 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms