RNA–Protein interactions for RNA: ENST00000595523.5

SHKBP1-206, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 4

Gene SHKBP1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-206ENST00000595523 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.77□□□□□ -0.69
SHKBP1-206ENST00000595523 KALRNO60229 2985 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 TMX2-CTNND1H3BSU7 103 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 PLD2O14939 933 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 ZW10O43264 779 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 DUX1O43812 170 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 AVILO75366 819 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 TNFSF15O95150 251 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 GAS8O95995 478 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 VIPP01282 170 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 ITGA2BP08514 1039 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 RALBP11234 206 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 TCP1P17987 556 aaKnown RBP10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 ITIH1P19827 911 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 MGAT1P26572 445 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 ARNTP27540 789 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 NMBRP28336 390 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 FNTAP49354 379 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 ERVPABLB-1P60509 514 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 CDK16Q00536 496 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 EIF3IQ13347 325 aaKnown RBP10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 LAMB3Q13751 1172 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 GPR18Q14330 331 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 RPE65Q16518 533 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 PCID2Q5JVF3 399 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 DUS1LQ6P1R4 473 aaKnown RBP10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 TMEM71Q6P5X7 295 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 LRRC8BQ6P9F7 803 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 FOXR1Q6PIV2 292 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 WDR74Q6RFH5 385 aaPredicted RBP10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 AFTPHQ6ULP2 937 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 PACS1Q6VY07 963 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 NLRP9Q7RTR0 991 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 CLEC14AQ86T13 490 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 CAND1Q86VP6 1230 aaKnown RBP10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 CREG2Q8IUH2 290 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 C17orf53Q8N3J3 647 aaPredicted RBP10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 FBXO39Q8N4B4 442 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 AVL9Q8NBF6 648 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 PPHLN1Q8NEY8 458 aaKnown RBP10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 SPDYE1Q8NFV5 336 aaPredicted RBP10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 OR10G6Q8NH81 332 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 HM13Q8TCT9 377 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 HEXDCQ8WVB3 486 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 PEX13Q92968 403 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 SH3KBP1Q96B97 665 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 SGSM3Q96HU1 749 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 RMDN2Q96LZ7 410 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 ZNF578Q96N58 590 aaPredicted RBP10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 INSM2Q96T92 566 aaPredicted RBP10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 STRADBQ9C0K7 418 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 WWP1Q9H0M0 922 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 STN1Q9H668 368 aaKnown RBP10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 SYBUQ9NX95 663 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 CFAP20Q9Y6A4 193 aaKnown RBP10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 ATRXP46100 2492 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 PIEZO2Q9H5I5 2752 aa10.76□□□□□ -0.69
SHKBP1-206ENST00000595523 KLHL33A6NCF5 533 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 CFAP99D6REC4 459 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 HGSO14964 777 aaPredicted RBP10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 OR1I1O60431 355 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 MTHFD1P11586 935 aaKnown RBP10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 CCL4P13236 92 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 ITPKBP27987 946 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 RBMS1P29558 406 aaKnown RBP10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 MLLT3P42568 568 aaPredicted RBP10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 MAPK9P45984 424 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 NPY2RP49146 381 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 GFERP55789 205 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 CCDC173Q0VFZ6 552 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 ITIH4Q14624 930 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 ARHGAP22Q7Z5H3 698 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 TRIM48Q8IWZ4 208 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 AGGF1Q8N302 714 aaeCLIP10.75□□□□□ -0.697e-20■■■■□ 22.6
SHKBP1-206ENST00000595523 MPP5Q8N3R9 675 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 OR4L1Q8NH43 312 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 JPH3Q8WXH2 748 aaPredicted RBP10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 NCSTNQ92542 709 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 RSC1A1Q92681 617 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 PMEPA1Q969W9 287 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 CXorf40BQ96DE9 158 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 CAPZA3Q96KX2 299 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 DCBLD2Q96PD2 775 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 NAPGQ99747 312 aaPredicted RBP10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 DPYSL5Q9BPU6 564 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 TRIM56Q9BRZ2 755 aaKnown RBP10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 KIFC1Q9BW19 673 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 IL22Q9GZX6 179 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 DDX47Q9H0S4 455 aaKnown RBP10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 COG4Q9H9E3 785 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 THSD1Q9NS62 852 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 KCND1Q9NSA2 647 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 MARCH4Q9P2E8 410 aaPredicted RBP10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 PISDQ9UG56 409 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 ACSL5Q9ULC5 683 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 MN1Q10571 1320 aaPredicted RBP10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 CFAP46Q8IYW2 2715 aa10.75□□□□□ -0.69
SHKBP1-206ENST00000595523 ANKRD12Q6UB98 2062 aa10.74□□□□□ -0.69
SHKBP1-206ENST00000595523 GOLGA6L10A0A0M3HER8 536 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms