RNA–Protein interactions for RNA: ENST00000591914.5

SMAD4-213, Transcript of SMAD family member 4, humanhuman

TSL 3

Gene SMAD4, Length 992 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-213ENST00000591914 CSTF2P33240 577 aaKnown RBP eCLIP26.68■■□□□ 1.86
SMAD4-213ENST00000591914 MAPK10P53779 464 aa26.68■■□□□ 1.86
SMAD4-213ENST00000591914 GPR18Q14330 331 aa26.68■■□□□ 1.86
SMAD4-213ENST00000591914 RPE65Q16518 533 aa26.68■■□□□ 1.86
SMAD4-213ENST00000591914 OR13J1Q8NGT2 312 aa26.68■■□□□ 1.86
SMAD4-213ENST00000591914 USP7Q93009 1102 aa26.68■■□□□ 1.86
SMAD4-213ENST00000591914 PBKQ96KB5 322 aa26.68■■□□□ 1.86
SMAD4-213ENST00000591914 PRORYQ9H606 182 aa26.68■■□□□ 1.86
SMAD4-213ENST00000591914 ACSL5Q9ULC5 683 aa26.68■■□□□ 1.86
SMAD4-213ENST00000591914 C9orf172C9J069 976 aa26.67■■□□□ 1.86
SMAD4-213ENST00000591914 ADRA1DP25100 572 aa26.67■■□□□ 1.86
SMAD4-213ENST00000591914 MSNP26038 577 aaKnown RBP26.67■■□□□ 1.86
SMAD4-213ENST00000591914 TAS2R42Q7RTR8 314 aa26.67■■□□□ 1.86
SMAD4-213ENST00000591914 PLXDC1Q8IUK5 500 aa26.67■■□□□ 1.86
SMAD4-213ENST00000591914 FOXJ2Q9P0K8 574 aa26.67■■□□□ 1.86
SMAD4-213ENST00000591914 TTC7AQ9ULT0 858 aaPredicted RBP26.67■■□□□ 1.86
SMAD4-213ENST00000591914 C9P02748 559 aa26.66■■□□□ 1.86
SMAD4-213ENST00000591914 ACVR1Q04771 509 aa26.66■■□□□ 1.86
SMAD4-213ENST00000591914 CLN3Q13286 438 aa26.66■■□□□ 1.86
SMAD4-213ENST00000591914 DBN1Q16643 649 aa26.66■■□□□ 1.86
SMAD4-213ENST00000591914 SNAP47Q5SQN1 464 aa26.66■■□□□ 1.86
SMAD4-213ENST00000591914 TSTD2Q5T7W7 516 aa26.66■■□□□ 1.86
SMAD4-213ENST00000591914 BROXQ5VW32 411 aa26.66■■□□□ 1.86
SMAD4-213ENST00000591914 GPR150Q8NGU9 434 aa26.66■■□□□ 1.86
SMAD4-213ENST00000591914 HM13Q8TCT9 377 aa26.66■■□□□ 1.86
SMAD4-213ENST00000591914 WWP1Q9H0M0 922 aa26.66■■□□□ 1.86
SMAD4-213ENST00000591914 PCDHGA3Q9Y5H0 932 aa26.66■■□□□ 1.86
SMAD4-213ENST00000591914 C17orf113A0A1B0GUU1 675 aa26.65■■□□□ 1.86
SMAD4-213ENST00000591914 CCDC162PA2VCL2 907 aa26.65■■□□□ 1.86
SMAD4-213ENST00000591914 OR51F1A6NGY5 319 aa26.65■■□□□ 1.86
SMAD4-213ENST00000591914 MTHFD1P11586 935 aaKnown RBP26.65■■□□□ 1.86
SMAD4-213ENST00000591914 TYRP1P17643 537 aa26.65■■□□□ 1.86
SMAD4-213ENST00000591914 FOXN2P32314 431 aa26.65■■□□□ 1.86
SMAD4-213ENST00000591914 UCNP55089 124 aa26.65■■□□□ 1.86
SMAD4-213ENST00000591914 BASP1P80723 227 aaKnown RBP26.65■■□□□ 1.86
SMAD4-213ENST00000591914 ZNF658BQ4V348 819 aaPredicted RBP26.65■■□□□ 1.86
SMAD4-213ENST00000591914 TMEM164Q5U3C3 297 aa26.65■■□□□ 1.86
SMAD4-213ENST00000591914 NLRP9Q7RTR0 991 aa26.65■■□□□ 1.86
SMAD4-213ENST00000591914 SLC35F6Q8N357 371 aa26.65■■□□□ 1.86
SMAD4-213ENST00000591914 BMPERQ8N8U9 685 aa26.65■■□□□ 1.86
SMAD4-213ENST00000591914 MS4A14Q96JA4 679 aa26.65■■□□□ 1.86
SMAD4-213ENST00000591914 PDLIM2Q96JY6 352 aa26.65■■□□□ 1.86
SMAD4-213ENST00000591914 ZNF778Q96MU6 729 aa26.65■■□□□ 1.86
SMAD4-213ENST00000591914 TAAR9Q96RI9 348 aa26.65■■□□□ 1.86
SMAD4-213ENST00000591914 OCIAD1Q9NX40 245 aa26.65■■□□□ 1.86
SMAD4-213ENST00000591914 SLC2A6Q9UGQ3 507 aa26.65■■□□□ 1.86
SMAD4-213ENST00000591914 TCAF1Q9Y4C2 921 aa26.65■■□□□ 1.86
SMAD4-213ENST00000591914 AHCTF1Q8WYP5 2266 aa26.64■■□□□ 1.86
SMAD4-213ENST00000591914 A8MU76 341 aa26.64■■□□□ 1.86
SMAD4-213ENST00000591914 B4E171 279 aa26.64■■□□□ 1.86
SMAD4-213ENST00000591914 ANKRD34CP0C6C1 535 aa26.64■■□□□ 1.86
SMAD4-213ENST00000591914 AMD1P17707 334 aa26.64■■□□□ 1.86
SMAD4-213ENST00000591914 TSPAN7P41732 249 aa26.64■■□□□ 1.86
SMAD4-213ENST00000591914 CAPZBP47756 277 aa26.64■■□□□ 1.86
SMAD4-213ENST00000591914 GFERP55789 205 aa26.64■■□□□ 1.86
SMAD4-213ENST00000591914 CFAP206Q8IYR0 622 aa26.64■■□□□ 1.86
SMAD4-213ENST00000591914 LILRA3Q8N6C8 439 aaPredicted RBP26.64■■□□□ 1.86
SMAD4-213ENST00000591914 CLDN19Q8N6F1 224 aa26.64■■□□□ 1.86
SMAD4-213ENST00000591914 PEX13Q92968 403 aa26.64■■□□□ 1.86
SMAD4-213ENST00000591914 HDAC10Q969S8 669 aa26.64■■□□□ 1.86
SMAD4-213ENST00000591914 INSM2Q96T92 566 aaPredicted RBP26.64■■□□□ 1.86
SMAD4-213ENST00000591914 IMP3Q9NV31 184 aaKnown RBP26.64■■□□□ 1.86
SMAD4-213ENST00000591914 FAM8A1Q9UBU6 413 aa26.64■■□□□ 1.86
SMAD4-213ENST00000591914 AP2A2O94973 939 aa26.63■■□□□ 1.85
SMAD4-213ENST00000591914 SLC35G4P0C7Q5 338 aa26.63■■□□□ 1.85
SMAD4-213ENST00000591914 CD82P27701 267 aa26.63■■□□□ 1.85
SMAD4-213ENST00000591914 TMPRSS3P57727 454 aa26.63■■□□□ 1.85
SMAD4-213ENST00000591914 ITIH4Q14624 930 aa26.63■■□□□ 1.85
SMAD4-213ENST00000591914 TTC27Q6P3X3 843 aa26.63■■□□□ 1.85
SMAD4-213ENST00000591914 PACS1Q6VY07 963 aa26.63■■□□□ 1.85
SMAD4-213ENST00000591914 SPDYE1Q8NFV5 336 aaPredicted RBP26.63■■□□□ 1.85
SMAD4-213ENST00000591914 RSC1A1Q92681 617 aa26.63■■□□□ 1.85
SMAD4-213ENST00000591914 ANP32BQ92688 251 aaKnown RBP26.63■■□□□ 1.85
SMAD4-213ENST00000591914 ART4Q93070 314 aa26.63■■□□□ 1.85
SMAD4-213ENST00000591914 PMEPA1Q969W9 287 aa26.63■■□□□ 1.85
SMAD4-213ENST00000591914 C9orf72Q96LT7 481 aa26.63■■□□□ 1.85
SMAD4-213ENST00000591914 FCRL3Q96P31 734 aaPredicted RBP26.63■■□□□ 1.85
SMAD4-213ENST00000591914 CCM2Q9BSQ5 444 aa26.63■■□□□ 1.85
SMAD4-213ENST00000591914 DDA1Q9BW61 102 aa26.63■■□□□ 1.85
SMAD4-213ENST00000591914 VPS37BQ9H9H4 285 aa26.63■■□□□ 1.85
SMAD4-213ENST00000591914 EIF2AK3Q9NZJ5 1116 aaKnown RBP26.63■■□□□ 1.85
SMAD4-213ENST00000591914 KLHL3Q9UH77 587 aa26.63■■□□□ 1.85
SMAD4-213ENST00000591914 CFAP20Q9Y6A4 193 aaKnown RBP26.63■■□□□ 1.85
SMAD4-213ENST00000591914 IGSF10Q6WRI0 2623 aa26.63■■□□□ 1.85
SMAD4-213ENST00000591914 EFCAB7A8K855 629 aa26.62■■□□□ 1.85
SMAD4-213ENST00000591914 IQCJ-SCHIP1C9J366 451 aaPredicted RBP26.62■■□□□ 1.85
SMAD4-213ENST00000591914 LIPCP11150 499 aa26.62■■□□□ 1.85
SMAD4-213ENST00000591914 NSG1P42857 185 aa26.62■■□□□ 1.85
SMAD4-213ENST00000591914 CDK16Q00536 496 aa26.62■■□□□ 1.85
SMAD4-213ENST00000591914 CAPRIN2Q6IMN6 1127 aaKnown RBP26.62■■□□□ 1.85
SMAD4-213ENST00000591914 AFTPHQ6ULP2 937 aa26.62■■□□□ 1.85
SMAD4-213ENST00000591914 FAM129CQ86XR2 697 aa26.62■■□□□ 1.85
SMAD4-213ENST00000591914 PPHLN1Q8NEY8 458 aaKnown RBP26.62■■□□□ 1.85
SMAD4-213ENST00000591914 SGSM3Q96HU1 749 aa26.62■■□□□ 1.85
SMAD4-213ENST00000591914 RMDN2Q96LZ7 410 aa26.62■■□□□ 1.85
SMAD4-213ENST00000591914 C12orf66Q96MD2 445 aa26.62■■□□□ 1.85
SMAD4-213ENST00000591914 NAP1L3Q99457 506 aaPredicted RBP26.62■■□□□ 1.85
SMAD4-213ENST00000591914 RAB33BQ9H082 229 aa26.62■■□□□ 1.85
SMAD4-213ENST00000591914 TRMT1Q9NXH9 659 aaKnown RBP26.62■■□□□ 1.85
SMAD4-213ENST00000591914 SLC39A1Q9NY26 324 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms