RNA–Protein interactions for RNA: ENST00000587945.1

VMP1-206, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-206ENST00000587945 ASB8Q9H765 288 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 LUC7LQ9NQ29 371 aaKnown RBP14.04□□□□□ -0.16
VMP1-206ENST00000587945 IMP3Q9NV31 184 aaKnown RBP14.04□□□□□ -0.16
VMP1-206ENST00000587945 SMOXQ9NWM0 555 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 EPHA6Q9UF33 1036 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 REXO2Q9Y3B8 237 aaKnown RBP14.04□□□□□ -0.16
VMP1-206ENST00000587945 DNMT3AQ9Y6K1 912 aaPredicted RBP14.04□□□□□ -0.16
VMP1-206ENST00000587945 SPTA1P02549 2419 aa14.04□□□□□ -0.16
VMP1-206ENST00000587945 TENM4Q6N022 2769 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 C2orf81A6NN90 581 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 TERTO14746 1132 aaKnown RBP14.03□□□□□ -0.16
VMP1-206ENST00000587945 SPAG6O75602 509 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 SRP72O76094 671 aaKnown RBP14.03□□□□□ -0.16
VMP1-206ENST00000587945 TIAF1O95411 115 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 RBP3P10745 1247 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 TCN2P20062 427 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 CTNNA2P26232 953 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 DLSTP36957 453 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 ZNF75DP51815 510 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 TMPRSS15P98073 1019 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 MAP7Q14244 749 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 IL11RAQ14626 422 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 PLCL1Q15111 1095 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 TAF1AQ15573 450 aaPredicted RBP14.03□□□□□ -0.16
VMP1-206ENST00000587945 LONRF2Q1L5Z9 754 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 METRNLQ641Q3 311 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 RAD9BQ6WBX8 426 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 CERS6Q6ZMG9 384 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 ATG14Q6ZNE5 492 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 CDKL3Q8IVW4 592 aaPredicted RBP14.03□□□□□ -0.16
VMP1-206ENST00000587945 LILRA3Q8N6C8 439 aaPredicted RBP14.03□□□□□ -0.16
VMP1-206ENST00000587945 ACRBPQ8NEB7 543 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 SPDYE1Q8NFV5 336 aaPredicted RBP14.03□□□□□ -0.16
VMP1-206ENST00000587945 OR13C4Q8NGS5 318 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 ALG3Q92685 438 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 PANX2Q96RD6 677 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 INSM2Q96T92 566 aaPredicted RBP14.03□□□□□ -0.16
VMP1-206ENST00000587945 MAP3K3Q99759 626 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 LACRTQ9GZZ8 138 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 WWP1Q9H0M0 922 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 ADNPQ9H2P0 1102 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 FAM96AQ9H5X1 160 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 LNPEPQ9UIQ6 1025 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 CROTQ9UKG9 612 aa14.03□□□□□ -0.16
VMP1-206ENST00000587945 CCL22O00626 93 aa14.02□□□□□ -0.17
VMP1-206ENST00000587945 SGTAO43765 313 aa14.02□□□□□ -0.17
VMP1-206ENST00000587945 POLBP06746 335 aa14.02□□□□□ -0.17
VMP1-206ENST00000587945 PYGMP11217 842 aa14.02□□□□□ -0.17
VMP1-206ENST00000587945 MTHFD1P11586 935 aaKnown RBP14.02□□□□□ -0.17
VMP1-206ENST00000587945 FGF5P12034 268 aa14.02□□□□□ -0.17
VMP1-206ENST00000587945 FOLR1P15328 257 aa14.02□□□□□ -0.17
VMP1-206ENST00000587945 NELFEP18615 380 aaKnown RBP14.02□□□□□ -0.17
VMP1-206ENST00000587945 PTPN7P35236 360 aa14.02□□□□□ -0.17
VMP1-206ENST00000587945 RWDD2BP57060 319 aa14.02□□□□□ -0.17
VMP1-206ENST00000587945 XIAPP98170 497 aa14.02□□□□□ -0.17
VMP1-206ENST00000587945 MSLNQ13421 630 aaPredicted RBP14.02□□□□□ -0.17
VMP1-206ENST00000587945 PRPSAP1Q14558 356 aa14.02□□□□□ -0.17
VMP1-206ENST00000587945 DENND5AQ6IQ26 1287 aa14.02□□□□□ -0.17
VMP1-206ENST00000587945 TMTC1Q8IUR5 882 aa14.02□□□□□ -0.17
VMP1-206ENST00000587945 STAMBPL1Q96FJ0 436 aa14.02□□□□□ -0.17
VMP1-206ENST00000587945 C12orf66Q96MD2 445 aa14.02□□□□□ -0.17
VMP1-206ENST00000587945 SPATA13Q96N96 652 aa14.02□□□□□ -0.17
VMP1-206ENST00000587945 RAB33BQ9H082 229 aa14.02□□□□□ -0.17
VMP1-206ENST00000587945 ZNF71Q9NQZ8 489 aaPredicted RBP14.02□□□□□ -0.17
VMP1-206ENST00000587945 SEMA5BQ9P283 1151 aa14.02□□□□□ -0.17
VMP1-206ENST00000587945 EFR3BQ9Y2G0 817 aa14.02□□□□□ -0.17
VMP1-206ENST00000587945 AAR2Q9Y312 384 aaKnown RBP14.02□□□□□ -0.17
VMP1-206ENST00000587945 TLN1Q9Y490 2541 aaKnown RBP14.02□□□□□ -0.17
VMP1-206ENST00000587945 ZFC3H1O60293 1989 aaKnown RBP14.02□□□□□ -0.17
VMP1-206ENST00000587945 GRID2IPA4D2P6 1211 aa14.01□□□□□ -0.17
VMP1-206ENST00000587945 C5orf60A6NFR6 353 aa14.01□□□□□ -0.17
VMP1-206ENST00000587945 MGAT4DA6NG13 374 aa14.01□□□□□ -0.17
VMP1-206ENST00000587945 KATNA1O75449 491 aa14.01□□□□□ -0.17
VMP1-206ENST00000587945 STK10O94804 968 aaKnown RBP14.01□□□□□ -0.17
VMP1-206ENST00000587945 FURINP09958 794 aa14.01□□□□□ -0.17
VMP1-206ENST00000587945 EBLN1P0CF75 366 aa14.01□□□□□ -0.17
VMP1-206ENST00000587945 ARCN1P48444 511 aaKnown RBP14.01□□□□□ -0.17
VMP1-206ENST00000587945 CSRP3P50461 194 aa14.01□□□□□ -0.17
VMP1-206ENST00000587945 MC1RQ01726 317 aa14.01□□□□□ -0.17
VMP1-206ENST00000587945 SKIDA1Q1XH10 827 aa14.01□□□□□ -0.17
VMP1-206ENST00000587945 PPP1R3BQ86XI6 285 aa14.01□□□□□ -0.17
VMP1-206ENST00000587945 CFAP206Q8IYR0 622 aa14.01□□□□□ -0.17
VMP1-206ENST00000587945 LRRC57Q8N9N7 239 aa14.01□□□□□ -0.17
VMP1-206ENST00000587945 SIDT2Q8NBJ9 832 aaKnown RBP14.01□□□□□ -0.17
VMP1-206ENST00000587945 OR2L2Q8NH16 312 aa14.01□□□□□ -0.17
VMP1-206ENST00000587945 SLC41A2Q96JW4 573 aa14.01□□□□□ -0.17
VMP1-206ENST00000587945 ZNF514Q96K75 400 aaPredicted RBP14.01□□□□□ -0.17
VMP1-206ENST00000587945 TBL1YQ9BQ87 522 aa14.01□□□□□ -0.17
VMP1-206ENST00000587945 FERMT1Q9BQL6 677 aa14.01□□□□□ -0.17
VMP1-206ENST00000587945 RBSNQ9H1K0 784 aa14.01□□□□□ -0.17
VMP1-206ENST00000587945 HRASLS2Q9NWW9 162 aa14.01□□□□□ -0.17
VMP1-206ENST00000587945 CRLS1Q9UJA2 301 aa14.01□□□□□ -0.17
VMP1-206ENST00000587945 ASH1LQ9NR48 2969 aaKnown RBP14.01□□□□□ -0.17
VMP1-206ENST00000587945 SETXQ7Z333 2677 aaKnown RBP14□□□□□ -0.17
VMP1-206ENST00000587945 CCDC66A2RUB6 948 aa14□□□□□ -0.17
VMP1-206ENST00000587945 OR5K3A6NET4 321 aa14□□□□□ -0.17
VMP1-206ENST00000587945 TJP3O95049 919 aa14□□□□□ -0.17
VMP1-206ENST00000587945 IPO7O95373 1038 aaKnown RBP14□□□□□ -0.17
VMP1-206ENST00000587945 PRSS56P0CW18 603 aa14□□□□□ -0.17
VMP1-206ENST00000587945 CDKN1CP49918 316 aaPredicted RBP14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms