RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 PNPLA1Q8N8W4 532 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 PTERQ96BW5 349 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 CHFRQ96EP1 664 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 SGF29Q96ES7 293 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 NSL1Q96IY1 281 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 VPS35Q96QK1 796 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 FAM129BQ96TA1 746 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 CCDC28BQ9BUN5 200 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 SPATA16Q9BXB7 569 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 C1QTNF3Q9BXJ4 246 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 HDAC8Q9BY41 377 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 FBRSQ9HAH7 460 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 PFDN4Q9NQP4 134 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 RAB23Q9ULC3 237 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 TNPO3Q9Y5L0 923 aaKnown RBP10.25□□□□□ -0.77
LIG3-203ENST00000585370 ZFHX4Q86UP3 3567 aa10.25□□□□□ -0.77
LIG3-203ENST00000585370 KIF26AQ9ULI4 1882 aaPredicted RBP10.24□□□□□ -0.77
LIG3-203ENST00000585370 A0A0U1RQS6 177 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 DCDC2BA2VCK2 349 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 MYO1CO00159 1063 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 FCHO1O14526 889 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 ZNF195O14628 629 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 TSPAN12O95859 305 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 S100BP04271 92 aaPredicted RBP10.24□□□□□ -0.77
LIG3-203ENST00000585370 FGF4P08620 206 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 ELFN1P0C7U0 828 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 MTHFD2P13995 350 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 GFAPP14136 432 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 ATP1B2P14415 290 aaPredicted RBP10.24□□□□□ -0.77
LIG3-203ENST00000585370 HOXA6P31267 233 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 KCNC1P48547 511 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 IDH3AP50213 366 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 MNAT1P51948 309 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 ALDH18A1P54886 795 aaKnown RBP10.24□□□□□ -0.77
LIG3-203ENST00000585370 CREB5Q02930 508 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 RALGDSQ12967 914 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 OR4D1Q15615 310 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 ATP13A5Q4VNC0 1218 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 GPRC6AQ5T6X5 926 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 HENMT1Q5T8I9 393 aaKnown RBP10.24□□□□□ -0.77
LIG3-203ENST00000585370 ANKS6Q68DC2 871 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 FRMD7Q6ZUT3 714 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 ACAD11Q709F0 780 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 ERN2Q76MJ5 926 aaKnown RBP10.24□□□□□ -0.77
LIG3-203ENST00000585370 PARS2Q7L3T8 475 aaKnown RBP10.24□□□□□ -0.77
LIG3-203ENST00000585370 EFL1Q7Z2Z2 1120 aaKnown RBP10.24□□□□□ -0.77
LIG3-203ENST00000585370 HSD11B1LQ7Z5J1 315 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 LSMEM2Q8N112 164 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 SYNPOQ8N3V7 929 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 FBXO39Q8N4B4 442 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 ZNF781Q8N8C0 355 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 SIDT2Q8NBJ9 832 aaKnown RBP10.24□□□□□ -0.77
LIG3-203ENST00000585370 EEF1AKMT1Q8WVE0 214 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 FUBP1Q96AE4 644 aaKnown RBP10.24□□□□□ -0.77
LIG3-203ENST00000585370 PHF21BQ96EK2 531 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 LINGO1Q96FE5 620 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 COG4Q9H9E3 785 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 PRSS16Q9NQE7 514 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 NUDT4Q9NZJ9 180 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 MARCOQ9UEW3 520 aaPredicted RBP10.24□□□□□ -0.77
LIG3-203ENST00000585370 LNPEPQ9UIQ6 1025 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 CDV3Q9UKY7 258 aaKnown RBP10.24□□□□□ -0.77
LIG3-203ENST00000585370 STK38LQ9Y2H1 464 aa10.24□□□□□ -0.77
LIG3-203ENST00000585370 RALGAPA1Q6GYQ0 2036 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 SUPT3HB4E1H0 165 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 H0YHG0 523 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 BTN3A1O00481 513 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 AREL1O15033 823 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 SLC22A2O15244 555 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 RAD51BO15315 384 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 SLC16A5O15375 505 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 AP1G1O43747 822 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 SNX2O60749 519 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 SUPT3HO75486 399 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 SUPT7LO94864 414 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 TRIM16O95361 564 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 MLYCDO95822 493 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 ADH1BP00325 375 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 EPHX1P07099 455 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 GSTM1P09488 218 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 MPC1LP0DKB6 136 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 MSH3P20585 1137 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 CALB2P22676 271 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 ARRB2P32121 409 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 CNR2P34972 360 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 MAPK9P45984 424 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 IRX1P78414 480 aaPredicted RBP10.23□□□□□ -0.77
LIG3-203ENST00000585370 GSTM4Q03013 218 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 DPTQ07507 201 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 CDC16Q13042 620 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 ACOX1Q15067 660 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 TSNQ15631 228 aaKnown RBP10.23□□□□□ -0.77
LIG3-203ENST00000585370 HSF5Q4G112 596 aaPredicted RBP10.23□□□□□ -0.77
LIG3-203ENST00000585370 UNC50Q53HI1 259 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 TMEM196Q5HYL7 178 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 SH2D4BQ5SQS7 431 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 PLEKHS1Q5SXH7 462 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 SDE2Q6IQ49 451 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 Q6ZVL8 140 aa10.23□□□□□ -0.77
LIG3-203ENST00000585370 NEK10Q6ZWH5 1172 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms