RNA–Protein interactions for RNA: ENST00000580784.5

CSNK1D-215, Transcript of casein kinase 1 delta, humanhuman

TSL 1 (best)

Gene CSNK1D, Length 1,081 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-215ENST00000580784 MIF4GDA9UHW6 222 aaKnown RBP20.84■□□□□ 0.93
CSNK1D-215ENST00000580784 CCL22O00626 93 aa20.84■□□□□ 0.93
CSNK1D-215ENST00000580784 METTL18O95568 372 aa20.84■□□□□ 0.93
CSNK1D-215ENST00000580784 FAM87AP0C7U9 286 aa20.84■□□□□ 0.93
CSNK1D-215ENST00000580784 MAP4P27816 1152 aaKnown RBP20.84■□□□□ 0.93
CSNK1D-215ENST00000580784 PDE1BQ01064 536 aa20.84■□□□□ 0.93
CSNK1D-215ENST00000580784 CACHD1Q5VU97 1274 aa20.84■□□□□ 0.93
CSNK1D-215ENST00000580784 IRGCQ6NXR0 463 aa20.84■□□□□ 0.93
CSNK1D-215ENST00000580784 KLHDC8BQ8IXV7 354 aa20.84■□□□□ 0.93
CSNK1D-215ENST00000580784 UNC5BQ8IZJ1 945 aa20.84■□□□□ 0.93
CSNK1D-215ENST00000580784 TTC13Q8NBP0 860 aa20.84■□□□□ 0.93
CSNK1D-215ENST00000580784 ZDHHC12Q96GR4 267 aa20.84■□□□□ 0.93
CSNK1D-215ENST00000580784 PPP1R2P1Q96PQ5 205 aa20.84■□□□□ 0.93
CSNK1D-215ENST00000580784 WWP1Q9H0M0 922 aa20.84■□□□□ 0.93
CSNK1D-215ENST00000580784 ZNF768Q9H5H4 540 aaKnown RBP20.84■□□□□ 0.93
CSNK1D-215ENST00000580784 IMP3Q9NV31 184 aaKnown RBP20.84■□□□□ 0.93
CSNK1D-215ENST00000580784 FAM8A1Q9UBU6 413 aa20.84■□□□□ 0.93
CSNK1D-215ENST00000580784 R3HDM2Q9Y2K5 976 aaKnown RBP20.84■□□□□ 0.93
CSNK1D-215ENST00000580784 CFAP20Q9Y6A4 193 aaKnown RBP20.84■□□□□ 0.93
CSNK1D-215ENST00000580784 LDB2O43679 373 aa20.83■□□□□ 0.93
CSNK1D-215ENST00000580784 SGTAO43765 313 aa20.83■□□□□ 0.93
CSNK1D-215ENST00000580784 ZNF140P52738 457 aaPredicted RBP20.83■□□□□ 0.93
CSNK1D-215ENST00000580784 PPP1CAP62136 330 aa20.83■□□□□ 0.93
CSNK1D-215ENST00000580784 KLF1Q13351 362 aaPredicted RBP20.83■□□□□ 0.93
CSNK1D-215ENST00000580784 PARP6Q2NL67 630 aa20.83■□□□□ 0.93
CSNK1D-215ENST00000580784 KCTD11Q693B1 232 aa20.83■□□□□ 0.93
CSNK1D-215ENST00000580784 XKR5Q6UX68 686 aa20.83■□□□□ 0.93
CSNK1D-215ENST00000580784 ARHGEF18Q6ZSZ5 1173 aa20.83■□□□□ 0.93
CSNK1D-215ENST00000580784 MICALCLQ6ZW33 695 aa20.83■□□□□ 0.93
CSNK1D-215ENST00000580784 OR2L2Q8NH16 312 aa20.83■□□□□ 0.93
CSNK1D-215ENST00000580784 KLHL6Q8WZ60 621 aa20.83■□□□□ 0.93
CSNK1D-215ENST00000580784 OR6C1Q96RD1 312 aa20.83■□□□□ 0.93
CSNK1D-215ENST00000580784 INSM2Q96T92 566 aaPredicted RBP20.83■□□□□ 0.93
CSNK1D-215ENST00000580784 RAB33BQ9H082 229 aa20.83■□□□□ 0.93
CSNK1D-215ENST00000580784 IMPACTQ9P2X3 320 aa20.83■□□□□ 0.93
CSNK1D-215ENST00000580784 EPHA6Q9UF33 1036 aa20.83■□□□□ 0.93
CSNK1D-215ENST00000580784 CRLS1Q9UJA2 301 aa20.83■□□□□ 0.93
CSNK1D-215ENST00000580784 TLN1Q9Y490 2541 aaKnown RBP20.83■□□□□ 0.92
CSNK1D-215ENST00000580784 ZNF189O75820 626 aaPredicted RBP20.82■□□□□ 0.92
CSNK1D-215ENST00000580784 DLGAP3O95886 979 aa20.82■□□□□ 0.92
CSNK1D-215ENST00000580784 MTHFD1P11586 935 aaKnown RBP20.82■□□□□ 0.92
CSNK1D-215ENST00000580784 ZNF28P17035 718 aa20.82■□□□□ 0.92
CSNK1D-215ENST00000580784 TPH1P17752 444 aa20.82■□□□□ 0.92
CSNK1D-215ENST00000580784 CDC25BP30305 580 aa20.82■□□□□ 0.92
CSNK1D-215ENST00000580784 GDF10P55107 478 aa20.82■□□□□ 0.92
CSNK1D-215ENST00000580784 PRSS42Q7Z5A4 293 aa20.82■□□□□ 0.92
CSNK1D-215ENST00000580784 TXLNBQ8N3L3 684 aa20.82■□□□□ 0.92
CSNK1D-215ENST00000580784 SPDYE1Q8NFV5 336 aaPredicted RBP20.82■□□□□ 0.92
CSNK1D-215ENST00000580784 DCUN1D1Q96GG9 259 aa20.82■□□□□ 0.92
CSNK1D-215ENST00000580784 HES6Q96HZ4 224 aa20.82■□□□□ 0.92
CSNK1D-215ENST00000580784 ELMO2Q96JJ3 720 aa20.82■□□□□ 0.92
CSNK1D-215ENST00000580784 TMEM121Q9BTD3 319 aa20.82■□□□□ 0.92
CSNK1D-215ENST00000580784 GPN2Q9H9Y4 310 aaPredicted RBP20.82■□□□□ 0.92
CSNK1D-215ENST00000580784 CAPN6Q9Y6Q1 641 aa20.82■□□□□ 0.92
CSNK1D-215ENST00000580784 PIKFYVEQ9Y2I7 2098 aa20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 NKX2-8O15522 239 aa20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 POLBP06746 335 aa20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 HADHAP40939 763 aa20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 CDKN1CP49918 316 aaPredicted RBP20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 ABHD18Q0P651 414 aa20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 NFATC3Q12968 1075 aa20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 PLCL1Q15111 1095 aa20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 BCL7AQ4VC05 210 aa20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 DUS1LQ6P1R4 473 aaKnown RBP20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 SNX20Q7Z614 316 aa20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 CFAP206Q8IYR0 622 aa20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 NXPE1Q8N323 547 aa20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 TAB3Q8N5C8 712 aaPredicted RBP20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 LILRA3Q8N6C8 439 aaPredicted RBP20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 SLC35B2Q8TB61 432 aa20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 KIAA1143Q96AT1 154 aaPredicted RBP20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 ULK4Q96C45 1275 aa20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 LRRC45Q96CN5 670 aa20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 SLC45A3Q96JT2 553 aa20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 DNAJC1Q96KC8 554 aaKnown RBP20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 LINC00615Q96LM1 132 aaPredicted RBP20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 C12orf66Q96MD2 445 aa20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 ULBP3Q9BZM4 244 aa20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 TRIT1Q9H3H1 467 aaKnown RBP20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 IL17BQ9UHF5 180 aa20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 FEZ2Q9UHY8 353 aaPredicted RBP20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 ACSL5Q9ULC5 683 aa20.81■□□□□ 0.92
CSNK1D-215ENST00000580784 TENM4Q6N022 2769 aa20.8■□□□□ 0.92
CSNK1D-215ENST00000580784 IGHV5-51A0A0C4DH38 117 aa20.8■□□□□ 0.92
CSNK1D-215ENST00000580784 ZIC2O95409 532 aaPredicted RBP20.8■□□□□ 0.92
CSNK1D-215ENST00000580784 RALBP11234 206 aa20.8■□□□□ 0.92
CSNK1D-215ENST00000580784 ITGB6P18564 788 aa20.8■□□□□ 0.92
CSNK1D-215ENST00000580784 NELFEP18615 380 aaKnown RBP20.8■□□□□ 0.92
CSNK1D-215ENST00000580784 ITGALP20701 1170 aa20.8■□□□□ 0.92
CSNK1D-215ENST00000580784 MC4RP32245 332 aa20.8■□□□□ 0.92
CSNK1D-215ENST00000580784 IL11RAQ14626 422 aa20.8■□□□□ 0.92
CSNK1D-215ENST00000580784 COPS8Q99627 209 aa20.8■□□□□ 0.92
CSNK1D-215ENST00000580784 C19orf43Q9BQ61 176 aa20.8■□□□□ 0.92
CSNK1D-215ENST00000580784 PIH1D1Q9NWS0 290 aaKnown RBP20.8■□□□□ 0.92
CSNK1D-215ENST00000580784 KLHL33A6NCF5 533 aa20.79■□□□□ 0.92
CSNK1D-215ENST00000580784 ZNF891A8MT65 544 aaPredicted RBP20.79■□□□□ 0.92
CSNK1D-215ENST00000580784 ATP1B2P14415 290 aaPredicted RBP20.79■□□□□ 0.92
CSNK1D-215ENST00000580784 POU6F1Q14863 301 aa20.79■□□□□ 0.92
CSNK1D-215ENST00000580784 KLHL35Q6PF15 583 aa20.79■□□□□ 0.92
CSNK1D-215ENST00000580784 BORAQ6PGQ7 559 aa20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms