RNA–Protein interactions for RNA: ENST00000574218.1

CTNS-208, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

TSL 5

Gene CTNS, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-208ENST00000574218 ZNF517Q6ZMY9 492 aaPredicted RBP11.65□□□□□ -0.54
CTNS-208ENST00000574218 SYTL1Q8IYJ3 562 aa11.65□□□□□ -0.54
CTNS-208ENST00000574218 CCNYQ8ND76 341 aa11.65□□□□□ -0.54
CTNS-208ENST00000574218 ST6GALNAC3Q8NDV1 305 aa11.65□□□□□ -0.54
CTNS-208ENST00000574218 ARRDC2Q8TBH0 407 aa11.65□□□□□ -0.54
CTNS-208ENST00000574218 UBE2Q2Q8WVN8 375 aa11.65□□□□□ -0.54
CTNS-208ENST00000574218 FATE1Q969F0 183 aa11.65□□□□□ -0.54
CTNS-208ENST00000574218 ZNF830Q96NB3 372 aaPredicted RBP11.65□□□□□ -0.54
CTNS-208ENST00000574218 C17orf62Q9BQA9 187 aa11.65□□□□□ -0.54
CTNS-208ENST00000574218 SYTL2Q9HCH5 934 aa11.65□□□□□ -0.54
CTNS-208ENST00000574218 IMP3Q9NV31 184 aaKnown RBP11.65□□□□□ -0.54
CTNS-208ENST00000574218 DTLQ9NZJ0 730 aa11.65□□□□□ -0.54
CTNS-208ENST00000574218 GPN3Q9UHW5 284 aaPredicted RBP11.65□□□□□ -0.54
CTNS-208ENST00000574218 PSMD13Q9UNM6 376 aa11.65□□□□□ -0.54
CTNS-208ENST00000574218 WDR37Q9Y2I8 494 aa11.65□□□□□ -0.54
CTNS-208ENST00000574218 ZNF711Q9Y462 761 aa11.65□□□□□ -0.54
CTNS-208ENST00000574218 APCP25054 2843 aa11.65□□□□□ -0.54
CTNS-208ENST00000574218 PCM1Q15154 2024 aa11.65□□□□□ -0.54
CTNS-208ENST00000574218 TMEM150CB9EJG8 249 aa11.64□□□□□ -0.55
CTNS-208ENST00000574218 LRRTM2O43300 516 aa11.64□□□□□ -0.55
CTNS-208ENST00000574218 HBQ1P09105 142 aa11.64□□□□□ -0.55
CTNS-208ENST00000574218 PIRTP0C851 137 aa11.64□□□□□ -0.55
CTNS-208ENST00000574218 GZMAP12544 262 aa11.64□□□□□ -0.55
CTNS-208ENST00000574218 TMEM115Q12893 351 aaPredicted RBP11.64□□□□□ -0.55
CTNS-208ENST00000574218 KRT33BQ14525 404 aa11.64□□□□□ -0.55
CTNS-208ENST00000574218 MYBPC3Q14896 1274 aa11.64□□□□□ -0.55
CTNS-208ENST00000574218 NCF4Q15080 339 aa11.64□□□□□ -0.55
CTNS-208ENST00000574218 PAFAH1B3Q15102 231 aaKnown RBP11.64□□□□□ -0.55
CTNS-208ENST00000574218 HADHQ16836 314 aaKnown RBP11.64□□□□□ -0.55
CTNS-208ENST00000574218 SP5Q6BEB4 398 aaPredicted RBP11.64□□□□□ -0.55
CTNS-208ENST00000574218 ZC3H18Q86VM9 953 aaKnown RBP11.64□□□□□ -0.55
CTNS-208ENST00000574218 ZNF547Q8IVP9 402 aa11.64□□□□□ -0.55
CTNS-208ENST00000574218 MCEMP1Q8IX19 187 aa11.64□□□□□ -0.55
CTNS-208ENST00000574218 GALNT16Q8N428 558 aa11.64□□□□□ -0.55
CTNS-208ENST00000574218 SLC38A9Q8NBW4 561 aa11.64□□□□□ -0.55
CTNS-208ENST00000574218 TSGA13Q96PP4 275 aa11.64□□□□□ -0.55
CTNS-208ENST00000574218 VPS35Q96QK1 796 aa11.64□□□□□ -0.55
CTNS-208ENST00000574218 ERGIC2Q96RQ1 377 aa11.64□□□□□ -0.55
CTNS-208ENST00000574218 RANBP9Q96S59 729 aa11.64□□□□□ -0.55
CTNS-208ENST00000574218 SRPK1Q96SB4 655 aaKnown RBP11.64□□□□□ -0.55
CTNS-208ENST00000574218 DPH2Q9BQC3 489 aaPredicted RBP11.64□□□□□ -0.55
CTNS-208ENST00000574218 DHRS4Q9BTZ2 278 aa11.64□□□□□ -0.55
CTNS-208ENST00000574218 TLR10Q9BXR5 811 aa11.64□□□□□ -0.55
CTNS-208ENST00000574218 UNKQ9C0B0 810 aaKnown RBP11.64□□□□□ -0.55
CTNS-208ENST00000574218 XPO4Q9C0E2 1151 aaKnown RBP11.64□□□□□ -0.55
CTNS-208ENST00000574218 MAGEE1Q9HCI5 957 aa11.64□□□□□ -0.55
CTNS-208ENST00000574218 MYO6Q9UM54 1294 aa11.64□□□□□ -0.55
CTNS-208ENST00000574218 OSGIN2Q9Y236 505 aa11.64□□□□□ -0.55
CTNS-208ENST00000574218 DOCK10Q96BY6 2186 aa11.64□□□□□ -0.55
CTNS-208ENST00000574218 OR6C74A6NCV1 312 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 LDB2O43679 373 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 MTHFD1P11586 935 aaKnown RBP11.63□□□□□ -0.55
CTNS-208ENST00000574218 TCF4P15884 667 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 GRNP28799 593 aaKnown RBP11.63□□□□□ -0.55
CTNS-208ENST00000574218 PBLDP30039 288 aaPredicted RBP11.63□□□□□ -0.55
CTNS-208ENST00000574218 GJC1P36383 396 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 HADHAP40939 763 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 PREPP48147 710 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 MMRN1Q13201 1228 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 IHHQ14623 411 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 ZRSR2Q15696 482 aaKnown RBP11.63□□□□□ -0.55
CTNS-208ENST00000574218 PCSK7Q16549 785 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 ZXDCQ2QGD7 858 aaPredicted RBP11.63□□□□□ -0.55
CTNS-208ENST00000574218 PTCHD3Q3KNS1 767 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 ZFYVE27Q5T4F4 411 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 CCDC183Q5T5S1 534 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 FAM69BQ5VUD6 431 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 NCBP2-AS2Q69YL0 99 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 LCN10Q6JVE6 187 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 FAM198BQ6UWH4 519 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 IRF2BP2Q7Z5L9 587 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 BEND7Q8N7W2 519 aaPredicted RBP11.63□□□□□ -0.55
CTNS-208ENST00000574218 N4BP2L2Q92802 583 aaPredicted RBP11.63□□□□□ -0.55
CTNS-208ENST00000574218 C12orf66Q96MD2 445 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 CBX8Q9HC52 389 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 PCMTD2Q9NV79 361 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 FANCLQ9NW38 375 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 LIMA1Q9UHB6 759 aaKnown RBP11.63□□□□□ -0.55
CTNS-208ENST00000574218 IP6K2Q9UHH9 426 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 SERTAD3Q9UJW9 196 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 BTRCQ9Y297 605 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 PCDHGA10Q9Y5H3 936 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 OTOGQ6ZRI0 2925 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 CNTRLQ7Z7A1 2325 aa11.63□□□□□ -0.55
CTNS-208ENST00000574218 MYO7BQ6PIF6 2116 aa11.62□□□□□ -0.55
CTNS-208ENST00000574218 A0A1B0GUH1 482 aa11.62□□□□□ -0.55
CTNS-208ENST00000574218 E7EQ34 232 aa11.62□□□□□ -0.55
CTNS-208ENST00000574218 MATN2O00339 956 aa11.62□□□□□ -0.55
CTNS-208ENST00000574218 POP7O75817 140 aaKnown RBP11.62□□□□□ -0.55
CTNS-208ENST00000574218 CD63P08962 238 aa11.62□□□□□ -0.55
CTNS-208ENST00000574218 PRF1P14222 555 aa11.62□□□□□ -0.55
CTNS-208ENST00000574218 BPIP17213 487 aa11.62□□□□□ -0.55
CTNS-208ENST00000574218 HLA-DPA1P20036 260 aa11.62□□□□□ -0.55
CTNS-208ENST00000574218 RORAP35398 523 aa11.62□□□□□ -0.55
CTNS-208ENST00000574218 FOLR3P41439 243 aa11.62□□□□□ -0.55
CTNS-208ENST00000574218 TNNT3P45378 269 aaPredicted RBP11.62□□□□□ -0.55
CTNS-208ENST00000574218 ARCN1P48444 511 aaKnown RBP11.62□□□□□ -0.55
CTNS-208ENST00000574218 DMPKQ09013 629 aa11.62□□□□□ -0.55
CTNS-208ENST00000574218 ABRQ12979 859 aa11.62□□□□□ -0.55
CTNS-208ENST00000574218 GSE1Q14687 1217 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms