RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 C7orf25Q9BPX7 421 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 TRIM51Q9BSJ1 452 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 PANK2Q9BZ23 570 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 CRIM1Q9NZV1 1036 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 DNAI1Q9UI46 699 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 FBXO2Q9UK22 296 aaPredicted RBP6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 CBLCQ9ULV8 474 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 NPIPA1Q9UND3 350 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 LIMCH1Q9UPQ0 1083 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 MTMR6Q9Y217 621 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 SIK3Q9Y2K2 1263 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 COQ4Q9Y3A0 265 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 ASB1Q9Y576 335 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 HS3ST3B1Q9Y662 390 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 BIRC6Q9NR09 4857 aa6.4□□□□□ -1.38
HERPUD1-217ENST00000569429 EML6Q6ZMW3 1958 aa6.4□□□□□ -1.39
HERPUD1-217ENST00000569429 ASPDHA6ND91 283 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 TMEM150CB9EJG8 249 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 FAM227AF5H4B4 570 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 DAB1O75553 588 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 GRAP2O75791 330 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 USP1O94782 785 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 FAM157CP0CG43 387 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 PVRP15151 417 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 RHOQP17081 205 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 TFE3P19532 575 aaPredicted RBP6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 THBS2P35442 1172 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 NEK4P51957 841 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 DCDP81605 110 aaKnown RBP6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 CEBPZQ03701 1054 aaKnown RBP6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 BCL2L1Q07817 233 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 CHRFAM7AQ494W8 412 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 FLYWCH1Q4VC44 716 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 ZFYVE27Q5T4F4 411 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 MANEALQ5VSG8 457 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 DENND2CQ68D51 928 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 RHBDD2Q6NTF9 364 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 WASH2PQ6VEQ5 465 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 YTHDF3Q7Z739 585 aaKnown RBP6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 SRLQ86TD4 932 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 SIAH3Q8IW03 269 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 FAM222BQ8WU58 562 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 ZFPM2Q8WW38 1151 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 ZNF592Q92610 1267 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 AP2M1Q96CW1 435 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 VPS50Q96JG6 964 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 CLIC6Q96NY7 704 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 TLR10Q9BXR5 811 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 AP1M1Q9BXS5 423 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 KLC2Q9H0B6 622 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 ABCG8Q9H221 673 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 NOL6Q9H6R4 1146 aaKnown RBP6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 LRTM1Q9HBL6 345 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 MRM3Q9HC36 420 aaKnown RBP6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 GDPD2Q9HCC8 539 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 PLCB1Q9NQ66 1216 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 SOHLH2Q9NX45 425 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 IFT80Q9P2H3 777 aaPredicted RBP6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 CDC23Q9UJX2 597 aa6.39□□□□□ -1.39
HERPUD1-217ENST00000569429 MALRD1Q5VYJ5 2156 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 PVALEFA0A1B0GWK0 134 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 A0A1W2PQ67 120 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 OR5H15A6NDH6 313 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 OR5K3A6NET4 321 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 ZNHIT1O43257 154 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 TLX2O43763 284 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 VEGFDO43915 354 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 NUAK1O60285 661 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 SMPD2O60906 423 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 WDPCPO95876 746 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 CALCAP01258 141 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 ATP1A1P05023 1023 aaKnown RBP6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 CYP2A6P11509 494 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 PDIA4P13667 645 aaKnown RBP6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 EGR1P18146 543 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 FDXRP22570 491 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 LHCGRP22888 699 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 DEUP1Q05D60 604 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 PDCLQ13371 301 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 NFIL3Q16649 462 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 DENND1BQ6P3S1 775 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 OLFML1Q6UWY5 402 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 SLC26A9Q7LBE3 791 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 FGD2Q7Z6J4 655 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 CCDC71Q8IV32 467 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 VWA5B2Q8N398 1253 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 TTC30BQ8N4P2 665 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 PDILTQ8N807 584 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 ZNF397Q8NF99 534 aaPredicted RBP6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 OR11G2Q8NGC1 345 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 FAM57AQ8TBR7 257 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 CXorf40BQ96DE9 158 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 CARD9Q9H257 536 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 OSGEPL1Q9H4B0 414 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 CATSPERBQ9H7T0 1116 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 KLC4Q9NSK0 619 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 PTGFRNQ9P2B2 879 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 NOCTQ9UK39 431 aaKnown RBP6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 CNOT6Q9ULM6 557 aaKnown RBP6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 STAP1Q9ULZ2 295 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms