RNA–Protein interactions for RNA: ENST00000568922.1

GGA2-213, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 2

Gene GGA2, Length 1,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-213ENST00000568922 UBXN2BQ14CS0 331 aa12.4□□□□□ -0.42
GGA2-213ENST00000568922 IRF4Q15306 451 aa12.4□□□□□ -0.42
GGA2-213ENST00000568922 ZSCAN26Q16670 478 aa12.4□□□□□ -0.42
GGA2-213ENST00000568922 CFAP157Q5JU67 520 aa12.4□□□□□ -0.42
GGA2-213ENST00000568922 CYHR1Q6ZMK1 362 aa12.4□□□□□ -0.42
GGA2-213ENST00000568922 NEK10Q6ZWH5 1172 aa12.4□□□□□ -0.42
GGA2-213ENST00000568922 FRA10AC1Q70Z53 315 aa12.4□□□□□ -0.42
GGA2-213ENST00000568922 HEATR4Q86WZ0 1026 aa12.4□□□□□ -0.42
GGA2-213ENST00000568922 UBALD2Q8IYN6 164 aa12.4□□□□□ -0.42
GGA2-213ENST00000568922 FBXO39Q8N4B4 442 aa12.4□□□□□ -0.42
GGA2-213ENST00000568922 PIWIL2Q8TC59 973 aaKnown RBP12.4□□□□□ -0.42
GGA2-213ENST00000568922 HMGB4Q8WW32 186 aa12.4□□□□□ -0.42
GGA2-213ENST00000568922 PHF21BQ96EK2 531 aa12.4□□□□□ -0.42
GGA2-213ENST00000568922 TMEM237Q96Q45 408 aa12.4□□□□□ -0.42
GGA2-213ENST00000568922 SORT1Q99523 831 aa12.4□□□□□ -0.42
GGA2-213ENST00000568922 SIKE1Q9BRV8 207 aa12.4□□□□□ -0.42
GGA2-213ENST00000568922 TEX101Q9BY14 249 aa12.4□□□□□ -0.42
GGA2-213ENST00000568922 OSBPL6Q9BZF3 934 aa12.4□□□□□ -0.42
GGA2-213ENST00000568922 BTBD1Q9H0C5 482 aa12.4□□□□□ -0.42
GGA2-213ENST00000568922 OR2AG1Q9H205 316 aa12.4□□□□□ -0.42
GGA2-213ENST00000568922 SGK2Q9HBY8 427 aa12.4□□□□□ -0.42
GGA2-213ENST00000568922 NPHS2Q9NP85 383 aa12.4□□□□□ -0.42
GGA2-213ENST00000568922 ITM2CQ9NQX7 267 aa12.4□□□□□ -0.42
GGA2-213ENST00000568922 NUDT4Q9NZJ9 180 aa12.4□□□□□ -0.42
GGA2-213ENST00000568922 ATXN10Q9UBB4 475 aa12.4□□□□□ -0.42
GGA2-213ENST00000568922 GPR34Q9UPC5 381 aa12.4□□□□□ -0.42
GGA2-213ENST00000568922 EYSQ5T1H1 3165 aa12.4□□□□□ -0.42
GGA2-213ENST00000568922 LRRC72A6NJI9 287 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 STX16-NPEPL1H3BU86 382 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 STX16O14662 325 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 RAD51BO15315 384 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 TRIM23P36406 574 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 HERVK_113P63132 956 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 HSPA14Q0VDF9 509 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 SF3A3Q12874 501 aaKnown RBP eCLIP12.39□□□□□ -0.434e-8■■■■□ 24.7
GGA2-213ENST00000568922 BOP1Q14137 746 aaKnown RBP12.39□□□□□ -0.43
GGA2-213ENST00000568922 PFKFB4Q16877 469 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 SBSNQ6UWP8 590 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 TRIM74Q86UV6 250 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 FAM124AQ86V42 546 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 TRIM69Q86WT6 500 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 SPATS2Q86XZ4 545 aaKnown RBP12.39□□□□□ -0.43
GGA2-213ENST00000568922 WDR75Q8IWA0 830 aaKnown RBP12.39□□□□□ -0.43
GGA2-213ENST00000568922 PGBD3Q8N328 593 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 CCNYL1Q8N7R7 359 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 BEND7Q8N7W2 519 aaPredicted RBP12.39□□□□□ -0.43
GGA2-213ENST00000568922 PTGR2Q8N8N7 351 aaPredicted RBP12.39□□□□□ -0.43
GGA2-213ENST00000568922 FLCNQ8NFG4 579 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 OR2T34Q8NGX1 318 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 LINC00615Q96LM1 132 aaPredicted RBP12.39□□□□□ -0.43
GGA2-213ENST00000568922 ERVK-6Q9BXR3 956 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 MBNL1Q9NR56 388 aaKnown RBP12.39□□□□□ -0.43
GGA2-213ENST00000568922 USP36Q9P275 1121 aaKnown RBP12.39□□□□□ -0.43
GGA2-213ENST00000568922 FAM170BA6NMN3 283 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 GPR89AB7ZAQ6 455 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 SNX2O60749 519 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 LILRB5O75023 590 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 GPC4O75487 556 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 SLCO2B1O94956 709 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 IGLV3-19P01714 112 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 S100BP04271 92 aaPredicted RBP12.39□□□□□ -0.43
GGA2-213ENST00000568922 GPR89BP0CG08 455 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 ARRB2P32121 409 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 ALDH18A1P54886 795 aaKnown RBP12.39□□□□□ -0.43
GGA2-213ENST00000568922 GALNT1Q10472 559 aaPredicted RBP12.39□□□□□ -0.43
GGA2-213ENST00000568922 PRKAA1Q13131 559 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 FZD5Q13467 585 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 INPP5AQ14642 412 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 TGFBIQ15582 683 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 SYTL3Q4VX76 610 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 ZNF678Q5SXM1 525 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 TRAPPC5Q8IUR0 188 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 SIX5Q8N196 739 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 KLK6Q92876 244 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 THOC1Q96FV9 657 aaKnown RBP12.39□□□□□ -0.43
GGA2-213ENST00000568922 TRMOQ9BU70 441 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 ILKAPQ9H0C8 392 aaPredicted RBP12.39□□□□□ -0.43
GGA2-213ENST00000568922 WDR26Q9H7D7 661 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 PHPT1Q9NRX4 125 aaPredicted RBP12.39□□□□□ -0.43
GGA2-213ENST00000568922 CD274Q9NZQ7 290 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 TSR3Q9UJK0 312 aaKnown RBP12.39□□□□□ -0.43
GGA2-213ENST00000568922 DNAJC16Q9Y2G8 782 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.39□□□□□ -0.43
GGA2-213ENST00000568922 RAP2CQ9Y3L5 183 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 OARD1Q9Y530 152 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 F5P12259 2224 aa12.39□□□□□ -0.43
GGA2-213ENST00000568922 C17orf113A0A1B0GUU1 675 aa12.38□□□□□ -0.43
GGA2-213ENST00000568922 ERICH4A6NGS2 130 aa12.38□□□□□ -0.43
GGA2-213ENST00000568922 SLC16A5O15375 505 aa12.38□□□□□ -0.43
GGA2-213ENST00000568922 C8GP07360 202 aa12.38□□□□□ -0.43
GGA2-213ENST00000568922 ZNF8P17098 575 aaPredicted RBP12.38□□□□□ -0.43
GGA2-213ENST00000568922 ACSL1P33121 698 aa12.38□□□□□ -0.43
GGA2-213ENST00000568922 HK2P52789 917 aa12.38□□□□□ -0.43
GGA2-213ENST00000568922 PPP2CBP62714 309 aa12.38□□□□□ -0.43
GGA2-213ENST00000568922 PPP2CAP67775 309 aa12.38□□□□□ -0.43
GGA2-213ENST00000568922 SP140Q13342 867 aa12.38□□□□□ -0.43
GGA2-213ENST00000568922 PPP1R3AQ16821 1122 aa12.38□□□□□ -0.43
GGA2-213ENST00000568922 ARL13AQ5H913 290 aaPredicted RBP12.38□□□□□ -0.43
GGA2-213ENST00000568922 ATG14Q6ZNE5 492 aa12.38□□□□□ -0.43
GGA2-213ENST00000568922 FRMD7Q6ZUT3 714 aa12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms