RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 AVL9Q8NBF6 648 aa13.37□□□□□ -0.27
VPS9D1-204ENST00000565023 OR52K1Q8NGK4 314 aa13.37□□□□□ -0.27
VPS9D1-204ENST00000565023 GPR150Q8NGU9 434 aa13.37□□□□□ -0.27
VPS9D1-204ENST00000565023 ACTRT1Q8TDG2 376 aa13.37□□□□□ -0.27
VPS9D1-204ENST00000565023 RSC1A1Q92681 617 aa13.37□□□□□ -0.27
VPS9D1-204ENST00000565023 TGM7Q96PF1 710 aa13.37□□□□□ -0.27
VPS9D1-204ENST00000565023 TAAR9Q96RI9 348 aa13.37□□□□□ -0.27
VPS9D1-204ENST00000565023 CCNL2Q96S94 520 aaPredicted RBP13.37□□□□□ -0.27
VPS9D1-204ENST00000565023 NAP1L3Q99457 506 aaPredicted RBP13.37□□□□□ -0.27
VPS9D1-204ENST00000565023 WWP1Q9H0M0 922 aa13.37□□□□□ -0.27
VPS9D1-204ENST00000565023 IMP3Q9NV31 184 aaKnown RBP13.37□□□□□ -0.27
VPS9D1-204ENST00000565023 OGFRQ9NZT2 677 aa13.37□□□□□ -0.27
VPS9D1-204ENST00000565023 PCDHB11Q9Y5F2 797 aa13.37□□□□□ -0.27
VPS9D1-204ENST00000565023 B3GALT1Q9Y5Z6 326 aa13.37□□□□□ -0.27
VPS9D1-204ENST00000565023 UNC79Q9P2D8 2635 aa13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 TEX51A0A1B0GUA7 166 aa13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 PRR19A6NJB7 356 aa13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 E7EVH7 732 aa13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 PGRMC1O00264 195 aaKnown RBP13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 PSMD3O43242 534 aa13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 LDB2O43679 373 aa13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 RASSF9O75901 435 aa13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 AP2A1O95782 977 aa13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 TCP1P17987 556 aaKnown RBP13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 HADHAP40939 763 aa13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 LEPRP48357 1165 aaKnown RBP13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 PDE1BQ01064 536 aa13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 MSLNQ13421 630 aaPredicted RBP13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 PLCL1Q15111 1095 aa13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 CYP1B1Q16678 543 aa13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 CCDC38Q502W7 563 aa13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 KCTD11Q693B1 232 aa13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 IRGCQ6NXR0 463 aa13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 WDR74Q6RFH5 385 aaPredicted RBP13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 PPP1R21Q6ZMI0 780 aa13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 C17orf53Q8N3J3 647 aaPredicted RBP13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 DNAAF3Q8N9W5 541 aa13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 DTX3LQ8TDB6 740 aa13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 NAPGQ99747 312 aaPredicted RBP13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 ETNK1Q9HBU6 452 aa13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 APMAPQ9HDC9 416 aa13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 POT1Q9NUX5 634 aa13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 SMOXQ9NWM0 555 aa13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 CFAP46Q8IYW2 2715 aa13.36□□□□□ -0.27
VPS9D1-204ENST00000565023 OR51F1A6NGY5 319 aa13.35□□□□□ -0.27
VPS9D1-204ENST00000565023 ZNF185O15231 689 aa13.35□□□□□ -0.27
VPS9D1-204ENST00000565023 FANCGO15287 622 aa13.35□□□□□ -0.27
VPS9D1-204ENST00000565023 CAPN5O15484 640 aaPredicted RBP13.35□□□□□ -0.27
VPS9D1-204ENST00000565023 RALBP11234 206 aa13.35□□□□□ -0.27
VPS9D1-204ENST00000565023 KCNJ1P48048 391 aa13.35□□□□□ -0.27
VPS9D1-204ENST00000565023 ARSDP51689 593 aa13.35□□□□□ -0.27
VPS9D1-204ENST00000565023 TERF1P54274 439 aa13.35□□□□□ -0.27
VPS9D1-204ENST00000565023 RPE65Q16518 533 aa13.35□□□□□ -0.27
VPS9D1-204ENST00000565023 AGAP9Q5VTM2 703 aa13.35□□□□□ -0.27
VPS9D1-204ENST00000565023 FAM92BQ6ZTR7 304 aa13.35□□□□□ -0.27
VPS9D1-204ENST00000565023 SNX20Q7Z614 316 aa13.35□□□□□ -0.27
VPS9D1-204ENST00000565023 PLXDC1Q8IUK5 500 aa13.35□□□□□ -0.27
VPS9D1-204ENST00000565023 CFAP206Q8IYR0 622 aa13.35□□□□□ -0.27
VPS9D1-204ENST00000565023 NXPE1Q8N323 547 aa13.35□□□□□ -0.27
VPS9D1-204ENST00000565023 LILRA3Q8N6C8 439 aaPredicted RBP13.35□□□□□ -0.27
VPS9D1-204ENST00000565023 CCDC89Q8N998 374 aa13.35□□□□□ -0.27
VPS9D1-204ENST00000565023 GLIS1Q8NBF1 620 aa13.35□□□□□ -0.27
VPS9D1-204ENST00000565023 SLC39A7Q92504 469 aa13.35□□□□□ -0.27
VPS9D1-204ENST00000565023 ULK4Q96C45 1275 aa13.35□□□□□ -0.27
VPS9D1-204ENST00000565023 C12orf66Q96MD2 445 aa13.35□□□□□ -0.27
VPS9D1-204ENST00000565023 COPS8Q99627 209 aa13.35□□□□□ -0.27
VPS9D1-204ENST00000565023 ARNT2Q9HBZ2 717 aa13.35□□□□□ -0.27
VPS9D1-204ENST00000565023 SLC40A1Q9NP59 571 aa13.35□□□□□ -0.27
VPS9D1-204ENST00000565023 SMARCAL1Q9NZC9 954 aa13.35□□□□□ -0.27
VPS9D1-204ENST00000565023 FEZ2Q9UHY8 353 aaPredicted RBP13.35□□□□□ -0.27
VPS9D1-204ENST00000565023 CTAGE9A4FU28 777 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 MGAT4DA6NG13 374 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 CFAP99D6REC4 459 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 K7ENP7 123 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 EFSO43281 561 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 KIF1CO43896 1103 aaKnown RBP13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 KCNJ13O60928 360 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 ZSCAN5DPP0CG00 497 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 FDFT1P37268 417 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 GRIA1P42261 906 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 PPP1CAP62136 330 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 FOXM1Q08050 763 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 DMPKQ09013 629 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 DCAF12Q5T6F0 453 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 INO80CQ6PI98 192 aaPredicted RBP13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 WASH2PQ6VEQ5 465 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 ARHGAP22Q7Z5H3 698 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 SERPINA9Q86WD7 417 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 IL22RA1Q8N6P7 574 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 SPDYE1Q8NFV5 336 aaPredicted RBP13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 MAGOHBQ96A72 148 aaKnown RBP13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 CDKN2AIPNLQ96HQ2 116 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 ELMO2Q96JJ3 720 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 ZNF514Q96K75 400 aaPredicted RBP13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 C9orf72Q96LT7 481 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 INSM2Q96T92 566 aaPredicted RBP13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 AP1M1Q9BXS5 423 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 EPB41L1Q9H4G0 881 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 WASH6PQ9NQA3 447 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 RAB6BQ9NRW1 208 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 227.1 ms