RNA–Protein interactions for RNA: ENST00000564815.5

COMMD4-211, Transcript of COMM domain containing 4, humanhuman

TSL 3 BASIC

Gene COMMD4, Length 639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-211ENST00000564815 UBP1Q9NZI7 540 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 TMPRSS11EQ9UL52 423 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 PSMD13Q9UNM6 376 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 ZNF451Q9Y4E5 1061 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 SPO11Q9Y5K1 396 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 BSNQ9UPA5 3926 aa13.9□□□□□ -0.18
COMMD4-211ENST00000564815 SSU72P8A0A1W2PR75 194 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 OR5K3A6NET4 321 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 MGAT4DA6NG13 374 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 UGT1A9O60656 530 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 GYPCP04921 128 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 EBLN1P0CF75 366 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 MTHFD1P11586 935 aaKnown RBP13.89□□□□□ -0.19
COMMD4-211ENST00000564815 UGT1A6P19224 532 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 LPOP22079 712 aaPredicted RBP13.89□□□□□ -0.19
COMMD4-211ENST00000564815 UGT1A1P22309 533 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 UGT1A4P22310 534 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 PTPN3P26045 913 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 NDUFS1P28331 727 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 AKT1P31749 480 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 DYNLT1P63172 113 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 KCNAB1Q14722 419 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 FAM199XQ6PEV8 388 aaPredicted RBP13.89□□□□□ -0.19
COMMD4-211ENST00000564815 NPNTQ6UXI9 565 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 PID1Q7Z2X4 250 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 GLT6D1Q7Z4J2 308 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 LUZP1Q86V48 1076 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 SLC25A41Q8N5S1 370 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 DDHD1Q8NEL9 900 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 ZNF398Q8TD17 642 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 CPT1BQ92523 772 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 FERMT1Q9BQL6 677 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 ING2Q9H160 280 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 UGT1A7Q9HAW7 530 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 UGT1A10Q9HAW8 530 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 UGT1A8Q9HAW9 530 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 IL17CQ9P0M4 197 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 KLHL8Q9P2G9 620 aaPredicted RBP13.89□□□□□ -0.19
COMMD4-211ENST00000564815 NENFQ9UMX5 172 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 HEBP2Q9Y5Z4 205 aa13.89□□□□□ -0.19
COMMD4-211ENST00000564815 ARGFXA6NJG6 315 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 C3orf70A6NLC5 250 aaPredicted RBP13.88□□□□□ -0.19
COMMD4-211ENST00000564815 OR2AG2A6NM03 316 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 C2orf81A6NN90 581 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 MATN2O00339 956 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 STX7O15400 261 aaKnown RBP13.88□□□□□ -0.19
COMMD4-211ENST00000564815 DPM1O60762 260 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 TIAF1O95411 115 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 RALBP11234 206 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 TNNT1P13805 278 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 HLA-DPA1P20036 260 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 TRIM14Q14142 442 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 NFE2L1Q14494 772 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 SIRPB2Q5JXA9 342 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 FNBP1LQ5T0N5 605 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 ZNF449Q6P9G9 518 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 FAM151BQ6UXP7 276 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 TTC30BQ8N4P2 665 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 BLOC1S5Q8TDH9 187 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 P3H4Q92791 437 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 DCUN1D1Q96GG9 259 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 CCDC42Q96M95 316 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 C12orf66Q96MD2 445 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 LRFN5Q96NI6 719 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 CCM2Q9BSQ5 444 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 PACSIN1Q9BY11 444 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 SLC29A3Q9BZD2 475 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 SLC7A5P2Q9GIP4 190 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 SLAMF7Q9NQ25 335 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 LATS2Q9NRM7 1088 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 SOHLH2Q9NX45 425 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 IFNKQ9P0W0 207 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 SERTAD3Q9UJW9 196 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 LRRK2Q5S007 2527 aa13.88□□□□□ -0.19
COMMD4-211ENST00000564815 FLNCQ14315 2725 aa13.87□□□□□ -0.19
COMMD4-211ENST00000564815 OR6C74A6NCV1 312 aa13.87□□□□□ -0.19
COMMD4-211ENST00000564815 SPOPO43791 374 aa13.87□□□□□ -0.19
COMMD4-211ENST00000564815 DNAJB5O75953 348 aa13.87□□□□□ -0.19
COMMD4-211ENST00000564815 RAB40ALP0C0E4 278 aa13.87□□□□□ -0.19
COMMD4-211ENST00000564815 SLC35G4P0C7Q5 338 aa13.87□□□□□ -0.19
COMMD4-211ENST00000564815 CDH3P22223 829 aa13.87□□□□□ -0.19
COMMD4-211ENST00000564815 GNLYP22749 145 aa13.87□□□□□ -0.19
COMMD4-211ENST00000564815 PBLDP30039 288 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-211ENST00000564815 CTSCP53634 463 aa13.87□□□□□ -0.19
COMMD4-211ENST00000564815 ADCY2Q08462 1091 aa13.87□□□□□ -0.19
COMMD4-211ENST00000564815 MPP3Q13368 585 aa13.87□□□□□ -0.19
COMMD4-211ENST00000564815 PRKD1Q15139 912 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-211ENST00000564815 SLC1A5Q15758 541 aa13.87□□□□□ -0.19
COMMD4-211ENST00000564815 GPRC6AQ5T6X5 926 aa13.87□□□□□ -0.19
COMMD4-211ENST00000564815 IZUMO3Q5VZ72 239 aa13.87□□□□□ -0.19
COMMD4-211ENST00000564815 CAPRIN2Q6IMN6 1127 aaKnown RBP13.87□□□□□ -0.19
COMMD4-211ENST00000564815 LURAP1LQ8IV03 231 aa13.87□□□□□ -0.19
COMMD4-211ENST00000564815 CLIP3Q96DZ5 547 aa13.87□□□□□ -0.19
COMMD4-211ENST00000564815 FCRL5Q96RD9 977 aa13.87□□□□□ -0.19
COMMD4-211ENST00000564815 INSM2Q96T92 566 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-211ENST00000564815 FSD1LQ9BXM9 530 aa13.87□□□□□ -0.19
COMMD4-211ENST00000564815 TRIM55Q9BYV6 548 aa13.87□□□□□ -0.19
COMMD4-211ENST00000564815 CUEDC1Q9NWM3 386 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-211ENST00000564815 SLC24A2Q9UI40 661 aa13.87□□□□□ -0.19
COMMD4-211ENST00000564815 TRHDEQ9UKU6 1024 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms