RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 SPATS2LQ9NUQ6 558 aaKnown RBP12.71□□□□□ -0.37
SPG7-209ENST00000564047 TLK1Q9UKI8 766 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 DHRS7Q9Y394 339 aa12.71□□□□□ -0.37
SPG7-209ENST00000564047 DNMT3AQ9Y6K1 912 aaPredicted RBP12.71□□□□□ -0.37
SPG7-209ENST00000564047 NUMA1Q14980 2115 aa12.71□□□□□ -0.38
SPG7-209ENST00000564047 A0A087X1B8 175 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 A0A096LPK6 155 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 A0A1W2PR77 199 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 TMEM202A6NGA9 273 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 OR2AG2A6NM03 316 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 FOXO6A8MYZ6 492 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 TNFRSF10CO14798 259 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 KPNA5O15131 536 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 PHGDHO43175 533 aaKnown RBP12.7□□□□□ -0.38
SPG7-209ENST00000564047 LILRB5O75023 590 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 DNAJC6O75061 913 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 TRIM16O95361 564 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 WISP3O95389 354 aaPredicted RBP12.7□□□□□ -0.38
SPG7-209ENST00000564047 SLC35E2BP0CK96 405 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 PYGBP11216 843 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 KRT4P19013 534 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 MAOBP27338 520 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 SLC26A3P40879 764 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 ATP1A2P50993 1020 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 CLCN7P51798 805 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 THOP1P52888 689 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 MAGOHP61326 146 aaKnown RBP12.7□□□□□ -0.38
SPG7-209ENST00000564047 SLC18A2Q05940 514 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 SRSF5Q13243 272 aaKnown RBP12.7□□□□□ -0.38
SPG7-209ENST00000564047 PDAP1Q13442 181 aaKnown RBP12.7□□□□□ -0.38
SPG7-209ENST00000564047 PLK5Q496M5 336 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 TAF1BQ53T94 588 aaPredicted RBP12.7□□□□□ -0.38
SPG7-209ENST00000564047 LYSMD4Q5XG99 296 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 PIM3Q86V86 326 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 LRRTM4Q86VH4 590 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 SPATS2Q86XZ4 545 aaKnown RBP12.7□□□□□ -0.38
SPG7-209ENST00000564047 TRAPPC5Q8IUR0 188 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 RGL4Q8IZJ4 473 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 OR13H1Q8NG92 308 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 OR56A4Q8NGH8 313 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 C1orf216Q8TAB5 229 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 LKAAEAR1Q8TD35 194 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 CD200R1Q8TD46 325 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 NAT14Q8WUY8 206 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 INPP5DQ92835 1189 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 KLHDC7BQ96G42 594 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 ZC3H10Q96K80 434 aaKnown RBP12.7□□□□□ -0.38
SPG7-209ENST00000564047 SMC6Q96SB8 1091 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 GPR21Q99679 349 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 CCM2Q9BSQ5 444 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 FAM107BQ9H098 131 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 EPN3Q9H201 632 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 GPAMQ9HCL2 828 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 TM9SF3Q9HD45 589 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 SSU72Q9NP77 194 aaKnown RBP12.7□□□□□ -0.38
SPG7-209ENST00000564047 TRMT6Q9UJA5 497 aaKnown RBP12.7□□□□□ -0.38
SPG7-209ENST00000564047 ANKRD6Q9Y2G4 727 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 ACOT9Q9Y305 439 aa12.7□□□□□ -0.38
SPG7-209ENST00000564047 ATXN2Q99700 1313 aaKnown RBP12.69□□□□□ -0.38
SPG7-209ENST00000564047 PLXNB3Q9ULL4 1909 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 C17orf113A0A1B0GUU1 675 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 KLHL33A6NCF5 533 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 GOLGA8RI6L899 631 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 KMOO15229 486 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 GRID2O43424 1007 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 THEGLP0DJG4 465 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 COL6A2P12110 1019 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 ZNF37AP17032 561 aaPredicted RBP12.69□□□□□ -0.38
SPG7-209ENST00000564047 ITGB6P18564 788 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 AOAHP28039 575 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 CD38P28907 300 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 CCR7P32248 378 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 TTLL9Q3SXZ7 439 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 PLEKHS1Q5SXH7 462 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 TPRG1LQ5T0D9 272 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 PAQR3Q6TCH7 311 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 ENPP7Q6UWV6 458 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 ARMCX6Q7L4S7 300 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 OTOAQ7RTW8 1153 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 LCA5Q86VQ0 697 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 ZNF547Q8IVP9 402 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 C4orf33Q8N1A6 199 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 ZBTB2Q8N680 514 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 BEND7Q8N7W2 519 aaPredicted RBP12.69□□□□□ -0.38
SPG7-209ENST00000564047 SIDT2Q8NBJ9 832 aaKnown RBP12.69□□□□□ -0.38
SPG7-209ENST00000564047 GIMAP7Q8NHV1 300 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 NETO1Q8TDF5 533 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 BCAS4Q8TDM0 211 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 MIR1-1HGQ9H1L0 117 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 VPS11Q9H270 941 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 FGF22Q9HCT0 170 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 MKS1Q9NXB0 559 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 GALPQ9UBC7 116 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 RALYQ9UKM9 306 aaKnown RBP12.69□□□□□ -0.38
SPG7-209ENST00000564047 RAB23Q9ULC3 237 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 SLCO1B1Q9Y6L6 691 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 SPEGQ15772 3267 aa12.69□□□□□ -0.38
SPG7-209ENST00000564047 SPTY2D1-AS1A0A0U1RR47 76 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 PRSS38A1L453 326 aa12.68□□□□□ -0.38
SPG7-209ENST00000564047 EIF3FO00303 357 aaPredicted RBP12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms