RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 DNAJB9Q9UBS3 223 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 ADGRE2Q9UHX3 823 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 TSR3Q9UJK0 312 aaKnown RBP13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 ASB1Q9Y576 335 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 MUSKO15146 869 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 MAN1A2O60476 641 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 INMTO95050 263 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 HMBSP08397 361 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 ACVRL1P37023 503 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 PBX3P40426 434 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 IL10RBQ08334 325 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 CYP20A1Q6UW02 462 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 SLCO6A1Q86UG4 719 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 SIDT2Q8NBJ9 832 aaKnown RBP13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 GIPC2Q8TF65 315 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 FATE1Q969F0 183 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 FKBP10Q96AY3 582 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 TADA1Q96BN2 335 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 RMDN1Q96DB5 314 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 SLC47A1Q96FL8 570 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 RDH12Q96NR8 316 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 RPRD1AQ96P16 312 aaPredicted RBP13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 ALPK1Q96QP1 1244 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 NODALQ96S42 347 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 MBOAT4Q96T53 435 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 OSBPL10Q9BXB5 764 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 CARS2Q9HA77 564 aaKnown RBP13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 SARS2Q9NP81 518 aaKnown RBP13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 ABI2Q9NYB9 513 aaPredicted RBP13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 CPA4Q9UI42 421 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 ENPP5Q9UJA9 477 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 MED16Q9Y2X0 877 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 GIT1Q9Y2X7 761 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 POLR3HQ9Y535 204 aaPredicted RBP13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 COMMD10Q9Y6G5 202 aa13.79□□□□□ -0.2
VPS9D1-202ENST00000561976 VPS26AO75436 327 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 E2F6O75461 281 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 SERPINF2P08697 491 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 OR1E1P30953 314 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 ERVPABLB-1P60509 514 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 PWP1Q13610 501 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 FBXL22Q6P050 247 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 FRA10AC1Q70Z53 315 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 MIB1Q86YT6 1006 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 PARP8Q8N3A8 854 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 OR4K2Q8NGD2 314 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 OR10A6Q8NH74 314 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 MUL1Q969V5 352 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 FAM162AQ96A26 154 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 SMPD4Q9NXE4 827 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 MTRRQ9UBK8 725 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 TRMT6Q9UJA5 497 aaKnown RBP13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 HAS3O00219 553 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 DFNA5O60443 496 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 NDUFS2O75306 463 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 NIPSNAP2O75323 286 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 CAPN1P07384 714 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 PRKACGP22612 351 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 CDKN1CP49918 316 aaPredicted RBP13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 HTR6P50406 440 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 GABARAPL2P60520 117 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 TOP3AQ13472 1001 aaPredicted RBP13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 DPY19L1Q2PZI1 675 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 PRR23BQ6ZRT6 265 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 SLC16A12Q6ZSM3 486 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 PLEKHH3Q7Z736 793 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 RBM23Q86U06 439 aaKnown RBP13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 ZNF683Q8IZ20 524 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 TTC30BQ8N4P2 665 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 ATP6V0D2Q8N8Y2 350 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 LINGO1Q96FE5 620 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 ZNF583Q96ND8 569 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 RBM4BQ9BQ04 359 aaKnown RBP13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 FEM1AQ9BSK4 669 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 TBCDQ9BTW9 1192 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 RBM4Q9BWF3 364 aaKnown RBP13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 WDR12Q9GZL7 423 aaKnown RBP13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 ACTR8Q9H981 624 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 UTS2RQ9UKP6 389 aa13.78□□□□□ -0.2
VPS9D1-202ENST00000561976 KATNA1O75449 491 aa13.77□□□□□ -0.2
VPS9D1-202ENST00000561976 CYP11A1P05108 521 aa13.77□□□□□ -0.2
VPS9D1-202ENST00000561976 HPCAL1P37235 193 aa13.77□□□□□ -0.2
VPS9D1-202ENST00000561976 HK3P52790 923 aa13.77□□□□□ -0.2
VPS9D1-202ENST00000561976 MRPS6P82932 125 aaKnown RBP13.77□□□□□ -0.2
VPS9D1-202ENST00000561976 OXA1LQ15070 435 aa13.77□□□□□ -0.2
VPS9D1-202ENST00000561976 LETMD1Q6P1Q0 360 aa13.77□□□□□ -0.2
VPS9D1-202ENST00000561976 NECAB2Q7Z6G3 386 aa13.77□□□□□ -0.2
VPS9D1-202ENST00000561976 SNX29P2Q8IUI4 249 aa13.77□□□□□ -0.2
VPS9D1-202ENST00000561976 ABI1Q8IZP0 508 aa13.77□□□□□ -0.2
VPS9D1-202ENST00000561976 AADATQ8N5Z0 425 aa13.77□□□□□ -0.2
VPS9D1-202ENST00000561976 OR7A2PQ8NGA2 310 aa13.77□□□□□ -0.2
VPS9D1-202ENST00000561976 EEF1AKMT1Q8WVE0 214 aa13.77□□□□□ -0.2
VPS9D1-202ENST00000561976 SLC39A13Q96H72 371 aa13.77□□□□□ -0.2
VPS9D1-202ENST00000561976 C1QTNF3Q9BXJ4 246 aa13.77□□□□□ -0.2
VPS9D1-202ENST00000561976 GIN1Q9NXP7 522 aa13.77□□□□□ -0.2
VPS9D1-202ENST00000561976 VAPAQ9P0L0 249 aa13.77□□□□□ -0.2
VPS9D1-202ENST00000561976 LOC100130705A0A1B0GUX0 176 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 GRXCR2A6NFK2 248 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 M0R3G1 203 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms