RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 GON4LQ3T8J9 2241 aa10.14□□□□□ -0.79
USP3-219ENST00000561326 CACNA1IQ9P0X4 2223 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 TMEM114B3SHH9 223 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 SUPT3HB4E1H0 165 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 TK2O00142 265 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 LIN7AO14910 233 aaPredicted RBP10.13□□□□□ -0.79
USP3-219ENST00000561326 KMOO15229 486 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 RAD51BO15315 384 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 DLX3O60479 287 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 SNX2O60749 519 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 KERAO60938 352 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 NDUFS2O75306 463 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 SUPT3HO75486 399 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 SLCO2B1O94956 709 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 C8GP07360 202 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 MPC1LP0DKB6 136 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 MYCLP1P12525 358 aaPredicted RBP10.13□□□□□ -0.79
USP3-219ENST00000561326 GFAPP14136 432 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 AKT2P31751 481 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 SERPINB5P36952 375 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 BOP1Q14137 746 aaKnown RBP10.13□□□□□ -0.79
USP3-219ENST00000561326 FGL2Q14314 439 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 GAS6Q14393 721 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 KHDC1Q4VXA5 237 aaKnown RBP10.13□□□□□ -0.79
USP3-219ENST00000561326 ACSBG2Q5FVE4 666 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 ZNF648Q5T619 568 aaPredicted RBP10.13□□□□□ -0.79
USP3-219ENST00000561326 GKAP1Q5VSY0 366 aaPredicted RBP10.13□□□□□ -0.79
USP3-219ENST00000561326 KIAA0895LQ68EN5 471 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 NEK10Q6ZWH5 1172 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 FRA10AC1Q70Z53 315 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 CRLF3Q8IUI8 442 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 GIMAP7Q8NHV1 300 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 FAM174AQ8TBP5 190 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 SKA2Q8WVK7 121 aaPredicted RBP10.13□□□□□ -0.79
USP3-219ENST00000561326 PTERQ96BW5 349 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 CCDC97Q96F63 343 aaPredicted RBP10.13□□□□□ -0.79
USP3-219ENST00000561326 TOE1Q96GM8 510 aaKnown RBP10.13□□□□□ -0.79
USP3-219ENST00000561326 CNDP1Q96KN2 507 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 FOPNLQ96NB1 174 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 HHIPQ96QV1 700 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 APOOQ9BUR5 198 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 UNKQ9C0B0 810 aaKnown RBP10.13□□□□□ -0.79
USP3-219ENST00000561326 PCED1AQ9H1Q7 454 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 MBNL1Q9NR56 388 aaKnown RBP10.13□□□□□ -0.79
USP3-219ENST00000561326 FGFR1OP2Q9NVK5 253 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 WSB2Q9NYS7 404 aaPredicted RBP10.13□□□□□ -0.79
USP3-219ENST00000561326 NCKIPSDQ9NZQ3 722 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 CD274Q9NZQ7 290 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 CYP8B1Q9UNU6 501 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 HS3ST3A1Q9Y663 406 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 THADAQ6YHU6 1953 aa10.13□□□□□ -0.79
USP3-219ENST00000561326 EML5Q05BV3 1969 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 MGAT4DA6NG13 374 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 PRAMEF26H0Y7S4 382 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 CDC7O00311 574 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 CHUKO15111 745 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 SLC16A5O15375 505 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 LATO43561 262 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 SGTAO43765 313 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 NUAK1O60285 661 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 EDF1O60869 148 aaKnown RBP10.12□□□□□ -0.79
USP3-219ENST00000561326 KCNJ13O60928 360 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 GPC4O75487 556 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 POP7O75817 140 aaKnown RBP10.12□□□□□ -0.79
USP3-219ENST00000561326 TSPAN12O95859 305 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 HIST1H2AGP0C0S8 130 aaPredicted RBP10.12□□□□□ -0.79
USP3-219ENST00000561326 SBK3P0C264 359 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 TROVE2P10155 538 aaKnown RBP eCLIP10.12□□□□□ -0.79
USP3-219ENST00000561326 FGF3P11487 239 aaPredicted RBP10.12□□□□□ -0.79
USP3-219ENST00000561326 ZNF8P17098 575 aaPredicted RBP10.12□□□□□ -0.79
USP3-219ENST00000561326 VCLP18206 1134 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 HIST1H2ADP20671 130 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 IMPDH1P20839 514 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 DRD4P21917 467 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 HTR1BP28222 390 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 SLC1A6P48664 564 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 CTSCP53634 463 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 NAGLUP54802 743 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 ABCE1P61221 599 aaKnown RBP10.12□□□□□ -0.79
USP3-219ENST00000561326 YPEL5P62699 121 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 SIGLEC14Q08ET2 396 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 BST1Q10588 318 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 OR4D1Q15615 310 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 TSNQ15631 228 aaKnown RBP10.12□□□□□ -0.79
USP3-219ENST00000561326 USP39Q53GS9 565 aaKnown RBP10.12□□□□□ -0.79
USP3-219ENST00000561326 CDKL4Q5MAI5 379 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 DOK6Q6PKX4 331 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 MAMSTRQ6ZN01 415 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 PIWIL4Q7Z3Z4 852 aaKnown RBP10.12□□□□□ -0.79
USP3-219ENST00000561326 TRIM74Q86UV6 250 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 LRRTM4Q86VH4 590 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 AMZ2Q86W34 360 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 CFAP206Q8IYR0 622 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 KIRREL3Q8IZU9 778 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 PELI3Q8N2H9 469 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 CCNYL1Q8N7R7 359 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 ANKS4BQ8N8V4 417 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 OR2L2Q8NH16 312 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 LKAAEAR1Q8TD35 194 aa10.12□□□□□ -0.79
USP3-219ENST00000561326 MCOLN3Q8TDD5 553 aa10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms