RNA–Protein interactions for RNA: ENST00000561065.1

LMX1B-204, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMX1B, Length 1,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-204ENST00000561065 CCL22O00626 93 aa15.65■□□□□ 0.1
LMX1B-204ENST00000561065 RAD1O60671 282 aa15.65■□□□□ 0.1
LMX1B-204ENST00000561065 POP7O75817 140 aaKnown RBP15.65■□□□□ 0.1
LMX1B-204ENST00000561065 LIFP15018 202 aa15.65■□□□□ 0.1
LMX1B-204ENST00000561065 IDSP22304 550 aa15.65■□□□□ 0.1
LMX1B-204ENST00000561065 PBLDP30039 288 aaPredicted RBP15.65■□□□□ 0.1
LMX1B-204ENST00000561065 FDFT1P37268 417 aa15.65■□□□□ 0.1
LMX1B-204ENST00000561065 CCZ1BP86790 482 aa15.65■□□□□ 0.1
LMX1B-204ENST00000561065 CCZ1P86791 482 aaPredicted RBP15.65■□□□□ 0.1
LMX1B-204ENST00000561065 DCAF12Q5T6F0 453 aa15.65■□□□□ 0.1
LMX1B-204ENST00000561065 KCTD11Q693B1 232 aa15.65■□□□□ 0.1
LMX1B-204ENST00000561065 TMEM220Q6QAJ8 160 aa15.65■□□□□ 0.1
LMX1B-204ENST00000561065 DET1Q7L5Y6 550 aa15.65■□□□□ 0.1
LMX1B-204ENST00000561065 TIPARPQ7Z3E1 657 aaKnown RBP15.65■□□□□ 0.1
LMX1B-204ENST00000561065 AMZ2Q86W34 360 aa15.65■□□□□ 0.1
LMX1B-204ENST00000561065 EXD3Q8N9H8 876 aa15.65■□□□□ 0.1
LMX1B-204ENST00000561065 HEXDCQ8WVB3 486 aa15.65■□□□□ 0.1
LMX1B-204ENST00000561065 EXTL1Q92935 676 aa15.65■□□□□ 0.1
LMX1B-204ENST00000561065 C9orf72Q96LT7 481 aa15.65■□□□□ 0.1
LMX1B-204ENST00000561065 TGM7Q96PF1 710 aa15.65■□□□□ 0.1
LMX1B-204ENST00000561065 NAP1L3Q99457 506 aaPredicted RBP15.65■□□□□ 0.1
LMX1B-204ENST00000561065 ARNT2Q9HBZ2 717 aa15.65■□□□□ 0.1
LMX1B-204ENST00000561065 PILRAQ9UKJ1 303 aa15.65■□□□□ 0.1
LMX1B-204ENST00000561065 PSMD13Q9UNM6 376 aa15.65■□□□□ 0.1
LMX1B-204ENST00000561065 JRKLQ9Y4A0 524 aa15.65■□□□□ 0.1
LMX1B-204ENST00000561065 PCDHB11Q9Y5F2 797 aa15.65■□□□□ 0.1
LMX1B-204ENST00000561065 PIKFYVEQ9Y2I7 2098 aa15.65■□□□□ 0.1
LMX1B-204ENST00000561065 KLHL33A6NCF5 533 aa15.64■□□□□ 0.09
LMX1B-204ENST00000561065 AP3B1O00203 1094 aa15.64■□□□□ 0.09
LMX1B-204ENST00000561065 CAPN5O15484 640 aaPredicted RBP15.64■□□□□ 0.09
LMX1B-204ENST00000561065 KIF1CO43896 1103 aaKnown RBP15.64■□□□□ 0.09
LMX1B-204ENST00000561065 SRP72O76094 671 aaKnown RBP15.64■□□□□ 0.09
LMX1B-204ENST00000561065 METTL18O95568 372 aa15.64■□□□□ 0.09
LMX1B-204ENST00000561065 PLA2G2AP14555 144 aa15.64■□□□□ 0.09
LMX1B-204ENST00000561065 AKT1P31749 480 aa15.64■□□□□ 0.09
LMX1B-204ENST00000561065 SH3BP2P78314 561 aa15.64■□□□□ 0.09
LMX1B-204ENST00000561065 CCNG2Q16589 344 aa15.64■□□□□ 0.09
LMX1B-204ENST00000561065 FNBP1LQ5T0N5 605 aa15.64■□□□□ 0.09
LMX1B-204ENST00000561065 DUS1LQ6P1R4 473 aaKnown RBP15.64■□□□□ 0.09
LMX1B-204ENST00000561065 PLXDC1Q8IUK5 500 aa15.64■□□□□ 0.09
LMX1B-204ENST00000561065 ZNF398Q8TD17 642 aa15.64■□□□□ 0.09
LMX1B-204ENST00000561065 CXorf40BQ96DE9 158 aa15.64■□□□□ 0.09
LMX1B-204ENST00000561065 ZNF514Q96K75 400 aaPredicted RBP15.64■□□□□ 0.09
LMX1B-204ENST00000561065 TMEM121Q9BTD3 319 aa15.64■□□□□ 0.09
LMX1B-204ENST00000561065 ASPSCR1Q9BZE9 553 aa15.64■□□□□ 0.09
LMX1B-204ENST00000561065 DRG1Q9Y295 367 aaKnown RBP15.64■□□□□ 0.09
LMX1B-204ENST00000561065 TLN1Q9Y490 2541 aaKnown RBP15.63■□□□□ 0.09
LMX1B-204ENST00000561065 TENM4Q6N022 2769 aa15.63■□□□□ 0.09
LMX1B-204ENST00000561065 AGAP14A8MT82 685 aa15.63■□□□□ 0.09
LMX1B-204ENST00000561065 LDB2O43679 373 aa15.63■□□□□ 0.09
LMX1B-204ENST00000561065 LIASO43766 372 aa15.63■□□□□ 0.09
LMX1B-204ENST00000561065 DLGAP3O95886 979 aa15.63■□□□□ 0.09
LMX1B-204ENST00000561065 RALBP11234 206 aa15.63■□□□□ 0.09
LMX1B-204ENST00000561065 ATP1A2P50993 1020 aa15.63■□□□□ 0.09
LMX1B-204ENST00000561065 TMPRSS15P98073 1019 aa15.63■□□□□ 0.09
LMX1B-204ENST00000561065 RPE65Q16518 533 aa15.63■□□□□ 0.09
LMX1B-204ENST00000561065 GSTA5Q7RTV2 222 aa15.63■□□□□ 0.09
LMX1B-204ENST00000561065 CACNA2D3Q8IZS8 1091 aa15.63■□□□□ 0.09
LMX1B-204ENST00000561065 LILRA3Q8N6C8 439 aaPredicted RBP15.63■□□□□ 0.09
LMX1B-204ENST00000561065 MED8Q96G25 268 aa15.63■□□□□ 0.09
LMX1B-204ENST00000561065 TEFMQ96QE5 360 aaKnown RBP15.63■□□□□ 0.09
LMX1B-204ENST00000561065 SLC12A9Q9BXP2 914 aa15.63■□□□□ 0.09
LMX1B-204ENST00000561065 ZNF768Q9H5H4 540 aaKnown RBP15.63■□□□□ 0.09
LMX1B-204ENST00000561065 ASB8Q9H765 288 aa15.63■□□□□ 0.09
LMX1B-204ENST00000561065 FBXO8Q9NRD0 319 aa15.63■□□□□ 0.09
LMX1B-204ENST00000561065 TMEM184BQ9Y519 407 aaPredicted RBP15.63■□□□□ 0.09
LMX1B-204ENST00000561065 CFAP20Q9Y6A4 193 aaKnown RBP15.63■□□□□ 0.09
LMX1B-204ENST00000561065 DNMT3AQ9Y6K1 912 aaPredicted RBP15.63■□□□□ 0.09
LMX1B-204ENST00000561065 KIF5CO60282 957 aa15.62■□□□□ 0.09
LMX1B-204ENST00000561065 CEP104O60308 925 aa15.62■□□□□ 0.09
LMX1B-204ENST00000561065 STK17BO94768 372 aa15.62■□□□□ 0.09
LMX1B-204ENST00000561065 IFNB1P01574 187 aa15.62■□□□□ 0.09
LMX1B-204ENST00000561065 PRSS56P0CW18 603 aa15.62■□□□□ 0.09
LMX1B-204ENST00000561065 ZNF28P17035 718 aa15.62■□□□□ 0.09
LMX1B-204ENST00000561065 AMD1P17707 334 aa15.62■□□□□ 0.09
LMX1B-204ENST00000561065 MSH3P20585 1137 aa15.62■□□□□ 0.09
LMX1B-204ENST00000561065 SEPHS1P49903 392 aa15.62■□□□□ 0.09
LMX1B-204ENST00000561065 CDKN1CP49918 316 aaPredicted RBP15.62■□□□□ 0.09
LMX1B-204ENST00000561065 LONRF2Q1L5Z9 754 aa15.62■□□□□ 0.09
LMX1B-204ENST00000561065 BCL7AQ4VC05 210 aa15.62■□□□□ 0.09
LMX1B-204ENST00000561065 METRNLQ641Q3 311 aa15.62■□□□□ 0.09
LMX1B-204ENST00000561065 DRICH1Q6PGQ1 229 aaPredicted RBP15.62■□□□□ 0.09
LMX1B-204ENST00000561065 CEACAM20Q6UY09 585 aa15.62■□□□□ 0.09
LMX1B-204ENST00000561065 PRSS42Q7Z5A4 293 aa15.62■□□□□ 0.09
LMX1B-204ENST00000561065 IL22RA1Q8N6P7 574 aa15.62■□□□□ 0.09
LMX1B-204ENST00000561065 SPDYE1Q8NFV5 336 aaPredicted RBP15.62■□□□□ 0.09
LMX1B-204ENST00000561065 ATG4AQ8WYN0 398 aa15.62■□□□□ 0.09
LMX1B-204ENST00000561065 ULK4Q96C45 1275 aa15.62■□□□□ 0.09
LMX1B-204ENST00000561065 PBKQ96KB5 322 aa15.62■□□□□ 0.09
LMX1B-204ENST00000561065 DNAJC1Q96KC8 554 aaKnown RBP15.62■□□□□ 0.09
LMX1B-204ENST00000561065 RMDN2Q96LZ7 410 aa15.62■□□□□ 0.09
LMX1B-204ENST00000561065 TTC1Q99614 292 aa15.62■□□□□ 0.09
LMX1B-204ENST00000561065 FAM96AQ9H5X1 160 aa15.62■□□□□ 0.09
LMX1B-204ENST00000561065 PIH1D1Q9NWS0 290 aaKnown RBP15.62■□□□□ 0.09
LMX1B-204ENST00000561065 PAK5Q9P286 719 aa15.62■□□□□ 0.09
LMX1B-204ENST00000561065 FAM8A1Q9UBU6 413 aa15.62■□□□□ 0.09
LMX1B-204ENST00000561065 LOC101059948A0A1B0GTJ6 334 aa15.61■□□□□ 0.09
LMX1B-204ENST00000561065 CFAP99D6REC4 459 aa15.61■□□□□ 0.09
LMX1B-204ENST00000561065 AP2A1O95782 977 aa15.61■□□□□ 0.09
LMX1B-204ENST00000561065 FGGP02679 453 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms