RNA–Protein interactions for RNA: ENST00000560435.1

SPG11-222, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 413 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-222ENST00000560435 CCSAPQ6IQ19 270 aaPredicted RBP2.14□□□□□ -2.07
SPG11-222ENST00000560435 KRTAP5-7Q6L8G8 165 aa2.14□□□□□ -2.07
SPG11-222ENST00000560435 LRRC8DQ7L1W4 858 aa2.14□□□□□ -2.07
SPG11-222ENST00000560435 KCNMB4Q86W47 210 aa2.14□□□□□ -2.07
SPG11-222ENST00000560435 Q8NBF4 154 aa2.14□□□□□ -2.07
SPG11-222ENST00000560435 OR5AP2Q8NGF4 316 aa2.14□□□□□ -2.07
SPG11-222ENST00000560435 OR14L1PQ8NHC6 308 aa2.14□□□□□ -2.07
SPG11-222ENST00000560435 DYRK2Q92630 601 aa2.14□□□□□ -2.07
SPG11-222ENST00000560435 SLCO2A1Q92959 643 aa2.14□□□□□ -2.07
SPG11-222ENST00000560435 PITPNM3Q9BZ71 974 aa2.14□□□□□ -2.07
SPG11-222ENST00000560435 BRF2Q9HAW0 419 aa2.14□□□□□ -2.07
SPG11-222ENST00000560435 MPP6Q9NZW5 540 aa2.14□□□□□ -2.07
SPG11-222ENST00000560435 NYAP2Q9P242 653 aa2.14□□□□□ -2.07
SPG11-222ENST00000560435 HSF4Q9ULV5 492 aa2.14□□□□□ -2.07
SPG11-222ENST00000560435 NTNG1Q9Y2I2 539 aa2.14□□□□□ -2.07
SPG11-222ENST00000560435 WDR37Q9Y2I8 494 aa2.14□□□□□ -2.07
SPG11-222ENST00000560435 TRIOBPQ9H2D6 2365 aa2.13□□□□□ -2.07
SPG11-222ENST00000560435 PIK3CAP42336 1068 aa2.13□□□□□ -2.07
SPG11-222ENST00000560435 HNRNPA3P51991 378 aaKnown RBP2.13□□□□□ -2.07
SPG11-222ENST00000560435 CDC16Q13042 620 aa2.13□□□□□ -2.07
SPG11-222ENST00000560435 CALCOCO2Q13137 446 aa2.13□□□□□ -2.07
SPG11-222ENST00000560435 DCTN2Q13561 401 aaKnown RBP2.13□□□□□ -2.07
SPG11-222ENST00000560435 LY6DQ14210 128 aa2.13□□□□□ -2.07
SPG11-222ENST00000560435 TAF5Q15542 800 aa2.13□□□□□ -2.07
SPG11-222ENST00000560435 SLC9B1Q4ZJI4 515 aa2.13□□□□□ -2.07
SPG11-222ENST00000560435 Q6ZRP5 223 aa2.13□□□□□ -2.07
SPG11-222ENST00000560435 SLC47A2Q86VL8 602 aa2.13□□□□□ -2.07
SPG11-222ENST00000560435 DNAJC22Q8N4W6 341 aa2.13□□□□□ -2.07
SPG11-222ENST00000560435 ZCCHC10Q8TBK6 192 aa2.13□□□□□ -2.07
SPG11-222ENST00000560435 MIPOL1Q8TD10 442 aa2.13□□□□□ -2.07
SPG11-222ENST00000560435 PRICKLE1Q96MT3 831 aaPredicted RBP2.13□□□□□ -2.07
SPG11-222ENST00000560435 DGCR6LQ9BY27 220 aa2.13□□□□□ -2.07
SPG11-222ENST00000560435 OLFML3Q9NRN5 406 aa2.13□□□□□ -2.07
SPG11-222ENST00000560435 COPG2Q9UBF2 871 aa2.13□□□□□ -2.07
SPG11-222ENST00000560435 RIPOR2Q9Y4F9 1068 aa2.13□□□□□ -2.07
SPG11-222ENST00000560435 FAM237AA0A1B0GTK4 181 aa2.12□□□□□ -2.07
SPG11-222ENST00000560435 CCDC194A0A1B0GVG4 234 aa2.12□□□□□ -2.07
SPG11-222ENST00000560435 KANSL1LA0AUZ9 987 aa2.12□□□□□ -2.07
SPG11-222ENST00000560435 MSGN1A6NI15 193 aa2.12□□□□□ -2.07
SPG11-222ENST00000560435 ACOD1A6NK06 481 aa2.12□□□□□ -2.07
SPG11-222ENST00000560435 PRC1O43663 620 aa2.12□□□□□ -2.07
SPG11-222ENST00000560435 SEC31AO94979 1220 aaKnown RBP2.12□□□□□ -2.07
SPG11-222ENST00000560435 KCNK5O95279 499 aa2.12□□□□□ -2.07
SPG11-222ENST00000560435 GCNT3O95395 438 aa2.12□□□□□ -2.07
SPG11-222ENST00000560435 CHKAP35790 457 aa2.12□□□□□ -2.07
SPG11-222ENST00000560435 MMP12P39900 470 aa2.12□□□□□ -2.07
SPG11-222ENST00000560435 POU5F1Q01860 360 aaKnown RBP2.12□□□□□ -2.07
SPG11-222ENST00000560435 LGALS3BPQ08380 585 aa2.12□□□□□ -2.07
SPG11-222ENST00000560435 CDONQ4KMG0 1287 aa2.12□□□□□ -2.07
SPG11-222ENST00000560435 ZNF805Q5CZA5 627 aa2.12□□□□□ -2.07
SPG11-222ENST00000560435 FBXO47Q5MNV8 452 aa2.12□□□□□ -2.07
SPG11-222ENST00000560435 DENND5BQ6ZUT9 1274 aa2.12□□□□□ -2.07
SPG11-222ENST00000560435 MYCT1Q8N699 235 aa2.12□□□□□ -2.07
SPG11-222ENST00000560435 L3MBTL4Q8NA19 623 aa2.12□□□□□ -2.07
SPG11-222ENST00000560435 ZNF519Q8TB69 540 aa2.12□□□□□ -2.07
SPG11-222ENST00000560435 HM13Q8TCT9 377 aa2.12□□□□□ -2.07
SPG11-222ENST00000560435 ARSGQ96EG1 525 aa2.12□□□□□ -2.07
SPG11-222ENST00000560435 TMEM39BQ9GZU3 492 aa2.12□□□□□ -2.07
SPG11-222ENST00000560435 KIF9Q9HAQ2 790 aa2.12□□□□□ -2.07
SPG11-222ENST00000560435 PPP1R14DQ9NXH3 145 aa2.12□□□□□ -2.07
SPG11-222ENST00000560435 FBXL17Q9UF56 701 aa2.12□□□□□ -2.07
SPG11-222ENST00000560435 GJD2Q9UKL4 321 aa2.12□□□□□ -2.07
SPG11-222ENST00000560435 LAS1LQ9Y4W2 734 aaKnown RBP2.12□□□□□ -2.07
SPG11-222ENST00000560435 CLIC4Q9Y696 253 aa2.12□□□□□ -2.07
SPG11-222ENST00000560435 A0A1W2PQM1 296 aa2.11□□□□□ -2.07
SPG11-222ENST00000560435 OR2M5A3KFT3 312 aa2.11□□□□□ -2.07
SPG11-222ENST00000560435 SNAP23O00161 211 aa2.11□□□□□ -2.07
SPG11-222ENST00000560435 HPRP00739 348 aa2.11□□□□□ -2.07
SPG11-222ENST00000560435 FOLR2P14207 255 aa2.11□□□□□ -2.07
SPG11-222ENST00000560435 CD81P60033 236 aa2.11□□□□□ -2.07
SPG11-222ENST00000560435 ZFP36L1Q07352 338 aaKnown RBP2.11□□□□□ -2.07
SPG11-222ENST00000560435 GSTA3Q16772 222 aa2.11□□□□□ -2.07
SPG11-222ENST00000560435 CXorf66Q5JRM2 361 aaPredicted RBP2.11□□□□□ -2.07
SPG11-222ENST00000560435 PIGZQ86VD9 579 aa2.11□□□□□ -2.07
SPG11-222ENST00000560435 HOGA1Q86XE5 327 aa2.11□□□□□ -2.07
SPG11-222ENST00000560435 LACC1Q8IV20 430 aa2.11□□□□□ -2.07
SPG11-222ENST00000560435 CRYBG2Q8N1P7 616 aa2.11□□□□□ -2.07
SPG11-222ENST00000560435 RASGEF1CQ8N431 466 aa2.11□□□□□ -2.07
SPG11-222ENST00000560435 MARVELD2Q8N4S9 558 aa2.11□□□□□ -2.07
SPG11-222ENST00000560435 OR4C3Q8NH37 302 aa2.11□□□□□ -2.07
SPG11-222ENST00000560435 NSL1Q96IY1 281 aa2.11□□□□□ -2.07
SPG11-222ENST00000560435 TMEM68Q96MH6 324 aa2.11□□□□□ -2.07
SPG11-222ENST00000560435 PYM1Q9BRP8 204 aaKnown RBP2.11□□□□□ -2.07
SPG11-222ENST00000560435 ZNF700Q9H0M5 742 aa2.11□□□□□ -2.07
SPG11-222ENST00000560435 GNB4Q9HAV0 340 aa2.11□□□□□ -2.07
SPG11-222ENST00000560435 RCC2Q9P258 522 aaKnown RBP2.11□□□□□ -2.07
SPG11-222ENST00000560435 POMT2Q9UKY4 750 aa2.11□□□□□ -2.07
SPG11-222ENST00000560435 TMEM129A0AVI4 362 aa2.1□□□□□ -2.07
SPG11-222ENST00000560435 JRKO75564 520 aa2.1□□□□□ -2.07
SPG11-222ENST00000560435 GPIP06744 558 aa2.1□□□□□ -2.07
SPG11-222ENST00000560435 IL7RP16871 459 aa2.1□□□□□ -2.07
SPG11-222ENST00000560435 IL4RP24394 825 aa2.1□□□□□ -2.07
SPG11-222ENST00000560435 DRD3P35462 400 aa2.1□□□□□ -2.07
SPG11-222ENST00000560435 OPRL1P41146 370 aa2.1□□□□□ -2.07
SPG11-222ENST00000560435 RPS18P62269 152 aaKnown RBP2.1□□□□□ -2.07
SPG11-222ENST00000560435 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.1□□□□□ -2.07
SPG11-222ENST00000560435 OLIG2Q13516 323 aa2.1□□□□□ -2.07
SPG11-222ENST00000560435 NAA35Q5VZE5 725 aa2.1□□□□□ -2.07
SPG11-222ENST00000560435 TMEM64Q6YI46 380 aa2.1□□□□□ -2.07
SPG11-222ENST00000560435 PARP8Q8N3A8 854 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms