RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 FOLR3P41439 243 aa11.54□□□□□ -0.56
SMAD3-206ENST00000558739 RENBPP51606 427 aa11.54□□□□□ -0.56
SMAD3-206ENST00000558739 PTP4A2Q12974 167 aa11.54□□□□□ -0.56
SMAD3-206ENST00000558739 STIM1Q13586 685 aa11.54□□□□□ -0.56
SMAD3-206ENST00000558739 SSPNQ14714 243 aa11.54□□□□□ -0.56
SMAD3-206ENST00000558739 C3AR1Q16581 482 aa11.54□□□□□ -0.56
SMAD3-206ENST00000558739 CYP2A13Q16696 494 aa11.54□□□□□ -0.56
SMAD3-206ENST00000558739 SKOR2Q2VWA4 1001 aaPredicted RBP11.54□□□□□ -0.56
SMAD3-206ENST00000558739 ALS2CLQ60I27 953 aa11.54□□□□□ -0.56
SMAD3-206ENST00000558739 XKRXQ6PP77 449 aa11.54□□□□□ -0.56
SMAD3-206ENST00000558739 TMEM207Q6UWW9 146 aa11.54□□□□□ -0.56
SMAD3-206ENST00000558739 MSANTD4Q8NCY6 345 aa11.54□□□□□ -0.56
SMAD3-206ENST00000558739 SMARCE1Q969G3 411 aa11.54□□□□□ -0.56
SMAD3-206ENST00000558739 KCTD15Q96SI1 283 aaPredicted RBP11.54□□□□□ -0.56
SMAD3-206ENST00000558739 NRTNQ99748 197 aa11.54□□□□□ -0.56
SMAD3-206ENST00000558739 TRIM56Q9BRZ2 755 aaKnown RBP11.54□□□□□ -0.56
SMAD3-206ENST00000558739 KLHL25Q9H0H3 589 aa11.54□□□□□ -0.56
SMAD3-206ENST00000558739 ENKD1Q9H0I2 346 aa11.54□□□□□ -0.56
SMAD3-206ENST00000558739 CXXC4Q9H2H0 198 aa11.54□□□□□ -0.56
SMAD3-206ENST00000558739 ATP13A2Q9NQ11 1180 aa11.54□□□□□ -0.56
SMAD3-206ENST00000558739 HRASLS2Q9NWW9 162 aa11.54□□□□□ -0.56
SMAD3-206ENST00000558739 PSMD13Q9UNM6 376 aa11.54□□□□□ -0.56
SMAD3-206ENST00000558739 CFAP20Q9Y6A4 193 aaKnown RBP11.54□□□□□ -0.56
SMAD3-206ENST00000558739 GTF3C1Q12789 2109 aa11.54□□□□□ -0.56
SMAD3-206ENST00000558739 ZNF749O43361 778 aa11.53□□□□□ -0.56
SMAD3-206ENST00000558739 CTSBP07858 339 aa11.53□□□□□ -0.56
SMAD3-206ENST00000558739 KRT3P12035 628 aa11.53□□□□□ -0.56
SMAD3-206ENST00000558739 ZNF30P17039 623 aa11.53□□□□□ -0.56
SMAD3-206ENST00000558739 CHRNB2P17787 502 aa11.53□□□□□ -0.56
SMAD3-206ENST00000558739 SPINT3P49223 89 aa11.53□□□□□ -0.56
SMAD3-206ENST00000558739 LMAN1P49257 510 aa11.53□□□□□ -0.56
SMAD3-206ENST00000558739 OGDHQ02218 1023 aa11.53□□□□□ -0.56
SMAD3-206ENST00000558739 RPE65Q16518 533 aa11.53□□□□□ -0.56
SMAD3-206ENST00000558739 AGAP9Q5VTM2 703 aa11.53□□□□□ -0.56
SMAD3-206ENST00000558739 AGAP7PQ5VUJ5 663 aa11.53□□□□□ -0.56
SMAD3-206ENST00000558739 FCRL6Q6DN72 434 aa11.53□□□□□ -0.56
SMAD3-206ENST00000558739 FAAH2Q6GMR7 532 aa11.53□□□□□ -0.56
SMAD3-206ENST00000558739 RFX8Q6ZV50 586 aa11.53□□□□□ -0.56
SMAD3-206ENST00000558739 C11orf96Q7Z7L8 435 aa11.53□□□□□ -0.56
SMAD3-206ENST00000558739 CREBRFQ8IUR6 639 aa11.53□□□□□ -0.56
SMAD3-206ENST00000558739 RBM12BQ8IXT5 1001 aaKnown RBP11.53□□□□□ -0.56
SMAD3-206ENST00000558739 FMR1NBQ8N0W7 255 aaPredicted RBP11.53□□□□□ -0.56
SMAD3-206ENST00000558739 OR1N1Q8NGS0 311 aa11.53□□□□□ -0.56
SMAD3-206ENST00000558739 OR2Y1Q8NGV0 311 aa11.53□□□□□ -0.56
SMAD3-206ENST00000558739 ADAMTS18Q8TE60 1221 aa11.53□□□□□ -0.56
SMAD3-206ENST00000558739 EID2BQ96D98 161 aa11.53□□□□□ -0.56
SMAD3-206ENST00000558739 AGAP4Q96P64 663 aa11.53□□□□□ -0.56
SMAD3-206ENST00000558739 IP6K3Q96PC2 410 aa11.53□□□□□ -0.56
SMAD3-206ENST00000558739 PEBP4Q96S96 227 aa11.53□□□□□ -0.56
SMAD3-206ENST00000558739 NDC1Q9BTX1 674 aa11.53□□□□□ -0.56
SMAD3-206ENST00000558739 HIVEP2P31629 2446 aa11.52□□□□□ -0.56
SMAD3-206ENST00000558739 C1orf232A0A0U1RR37 186 aa11.52□□□□□ -0.57
SMAD3-206ENST00000558739 AGPSO00116 658 aa11.52□□□□□ -0.57
SMAD3-206ENST00000558739 ZNHIT1O43257 154 aa11.52□□□□□ -0.57
SMAD3-206ENST00000558739 KLHL18O94889 574 aa11.52□□□□□ -0.57
SMAD3-206ENST00000558739 GNA14O95837 355 aa11.52□□□□□ -0.57
SMAD3-206ENST00000558739 F10P00742 488 aa11.52□□□□□ -0.57
SMAD3-206ENST00000558739 CYP1A1P04798 512 aaPredicted RBP11.52□□□□□ -0.57
SMAD3-206ENST00000558739 HADHAP40939 763 aa11.52□□□□□ -0.57
SMAD3-206ENST00000558739 BPIFB4P59827 614 aa11.52□□□□□ -0.57
SMAD3-206ENST00000558739 RPL7AP62424 266 aaKnown RBP11.52□□□□□ -0.57
SMAD3-206ENST00000558739 PPP2R2AP63151 447 aa11.52□□□□□ -0.57
SMAD3-206ENST00000558739 AIMP2Q13155 320 aaKnown RBP11.52□□□□□ -0.57
SMAD3-206ENST00000558739 GALNT3Q14435 633 aa11.52□□□□□ -0.57
SMAD3-206ENST00000558739 CAMK4Q16566 473 aa11.52□□□□□ -0.57
SMAD3-206ENST00000558739 ZNF569Q5MCW4 686 aa11.52□□□□□ -0.57
SMAD3-206ENST00000558739 PRAMEF13Q5VWM6 474 aa11.52□□□□□ -0.57
SMAD3-206ENST00000558739 MTFR2Q6P444 385 aa11.52□□□□□ -0.57
SMAD3-206ENST00000558739 FAM83HQ6ZRV2 1179 aaPredicted RBP11.52□□□□□ -0.57
SMAD3-206ENST00000558739 B4GALNT4Q76KP1 1039 aa11.52□□□□□ -0.57
SMAD3-206ENST00000558739 LRRTM4Q86VH4 590 aa11.52□□□□□ -0.57
SMAD3-206ENST00000558739 MCEEQ96PE7 176 aa11.52□□□□□ -0.57
SMAD3-206ENST00000558739 CD180Q99467 661 aa11.52□□□□□ -0.57
SMAD3-206ENST00000558739 TREX2Q9BQ50 279 aaPredicted RBP11.52□□□□□ -0.57
SMAD3-206ENST00000558739 TIMM29Q9BSF4 260 aa11.52□□□□□ -0.57
SMAD3-206ENST00000558739 DHRS4Q9BTZ2 278 aa11.52□□□□□ -0.57
SMAD3-206ENST00000558739 FAM83DQ9H4H8 585 aa11.52□□□□□ -0.57
SMAD3-206ENST00000558739 DHX35Q9H5Z1 703 aaKnown RBP11.52□□□□□ -0.57
SMAD3-206ENST00000558739 SAMSN1Q9NSI8 373 aaKnown RBP11.52□□□□□ -0.57
SMAD3-206ENST00000558739 CCM2LQ9NUG4 571 aaPredicted RBP11.52□□□□□ -0.57
SMAD3-206ENST00000558739 ETNK2Q9NVF9 386 aa11.52□□□□□ -0.57
SMAD3-206ENST00000558739 NOCTQ9UK39 431 aaKnown RBP11.52□□□□□ -0.57
SMAD3-206ENST00000558739 AP4E1Q9UPM8 1137 aa11.52□□□□□ -0.57
SMAD3-206ENST00000558739 CHKBQ9Y259 395 aa11.52□□□□□ -0.57
SMAD3-206ENST00000558739 HCFC1P51610 2035 aa11.52□□□□□ -0.57
SMAD3-206ENST00000558739 OR6C74A6NCV1 312 aa11.51□□□□□ -0.57
SMAD3-206ENST00000558739 HCRTR1O43613 425 aa11.51□□□□□ -0.57
SMAD3-206ENST00000558739 KLHL41O60662 606 aa11.51□□□□□ -0.57
SMAD3-206ENST00000558739 SLC19A2O60779 497 aa11.51□□□□□ -0.57
SMAD3-206ENST00000558739 SLC25A14O95258 325 aaPredicted RBP11.51□□□□□ -0.57
SMAD3-206ENST00000558739 SMC2O95347 1197 aa11.51□□□□□ -0.57
SMAD3-206ENST00000558739 PRLP01236 227 aa11.51□□□□□ -0.57
SMAD3-206ENST00000558739 HSP90AA1P07900 732 aaKnown RBP11.51□□□□□ -0.57
SMAD3-206ENST00000558739 PVRP15151 417 aa11.51□□□□□ -0.57
SMAD3-206ENST00000558739 IDSP22304 550 aa11.51□□□□□ -0.57
SMAD3-206ENST00000558739 ZNF143P52747 638 aaPredicted RBP11.51□□□□□ -0.57
SMAD3-206ENST00000558739 PMP22Q01453 160 aa11.51□□□□□ -0.57
SMAD3-206ENST00000558739 FMO1Q01740 532 aa11.51□□□□□ -0.57
SMAD3-206ENST00000558739 TMTC4Q5T4D3 741 aa11.51□□□□□ -0.57
SMAD3-206ENST00000558739 TMEM198Q66K66 360 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms