RNA–Protein interactions for RNA: ENST00000558040.5

SNX1-203, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-203ENST00000558040 EEF1AKMT1Q8WVE0 214 aa16.58■□□□□ 0.24
SNX1-203ENST00000558040 GAB3Q8WWW8 586 aa16.58■□□□□ 0.24
SNX1-203ENST00000558040 TMEM159Q96B96 161 aa16.58■□□□□ 0.24
SNX1-203ENST00000558040 FAM111AQ96PZ2 611 aa16.58■□□□□ 0.24
SNX1-203ENST00000558040 ORAI3Q9BRQ5 295 aa16.58■□□□□ 0.24
SNX1-203ENST00000558040 INTS9Q9NV88 658 aaKnown RBP16.58■□□□□ 0.24
SNX1-203ENST00000558040 TMEM216Q9P0N5 145 aa16.58■□□□□ 0.24
SNX1-203ENST00000558040 SLC17A7Q9P2U7 560 aa16.58■□□□□ 0.24
SNX1-203ENST00000558040 KLQ9UEF7 1012 aa16.58■□□□□ 0.24
SNX1-203ENST00000558040 ZNHIT2Q9UHR6 403 aa16.58■□□□□ 0.24
SNX1-203ENST00000558040 EIF2B4Q9UI10 523 aaKnown RBP16.58■□□□□ 0.24
SNX1-203ENST00000558040 MOSPD1Q9UJG1 213 aa16.58■□□□□ 0.24
SNX1-203ENST00000558040 DOCK9Q9BZ29 2069 aa16.58■□□□□ 0.24
SNX1-203ENST00000558040 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 PRSS38A1L453 326 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 MGAT4DA6NG13 374 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 KCNJ13O60928 360 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 CD1DP15813 335 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 CHN1P15882 459 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 AVPR2P30518 371 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 GMPRP36959 345 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 RACK1P63244 317 aaKnown RBP16.57■□□□□ 0.24
SNX1-203ENST00000558040 OVGP1Q12889 678 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 DLG1Q12959 904 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 MPP2Q14168 576 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 ZNF528Q3MIS6 628 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 ACSBG2Q5FVE4 666 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 LVRNQ6Q4G3 990 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 IQCHQ86VS3 1027 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 AMZ2Q86W34 360 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 ZNF547Q8IVP9 402 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 TMEFF1Q8IYR6 380 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 SPATA6LQ8N4H0 392 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 OXR1Q8N573 874 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 MFSD2AQ8NA29 543 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 OR13H1Q8NG92 308 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 OR2L2Q8NH16 312 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 MDM1Q8TC05 714 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 RDH11Q8TC12 318 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 MGARPQ8TDB4 240 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 DENND1AQ8TEH3 1009 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 GLMNQ92990 594 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 KLHDC7BQ96G42 594 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 SCARF2Q96GP6 870 aaPredicted RBP16.57■□□□□ 0.24
SNX1-203ENST00000558040 SLC6A18Q96N87 628 aa16.57■□□□□ 0.24
SNX1-203ENST00000558040 MRPL57Q9BQC6 102 aaKnown RBP16.57■□□□□ 0.24
SNX1-203ENST00000558040 MRPL46Q9H2W6 279 aaKnown RBP16.57■□□□□ 0.24
SNX1-203ENST00000558040 TFB2MQ9H5Q4 396 aaKnown RBP16.57■□□□□ 0.24
SNX1-203ENST00000558040 TNFRSF10AO00220 468 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 PLIN3O60664 434 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 TSPAN12O95859 305 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 PROCP04070 461 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 THEGLP0DJG4 465 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 MPC1LP0DKB6 136 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 TFEBP19484 476 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 CD38P28907 300 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 CNR2P34972 360 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 MAPK9P45984 424 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 GLRBP48167 497 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 ARHGAP8P85298 464 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 GBX1Q14549 363 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 PLA2G4EQ3MJ16 856 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 C16orf46Q6P387 395 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 NEK10Q6ZWH5 1172 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 RGL4Q8IZJ4 473 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 FSTL5Q8N475 847 aaPredicted RBP16.56■□□□□ 0.24
SNX1-203ENST00000558040 ARMC2Q8NEN0 867 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 DYDC1Q8WWB3 177 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 DNASE2BQ8WZ79 361 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 KIAA1191Q96A73 305 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 GPR78Q96P69 363 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 OR2M4Q96R27 311 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 PAIP2Q9BPZ3 127 aaKnown RBP16.56■□□□□ 0.24
SNX1-203ENST00000558040 TIMM29Q9BSF4 260 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 MIR1-1HGQ9H1L0 117 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 COG4Q9H9E3 785 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 FGF22Q9HCT0 170 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 GPR27Q9NS67 375 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 ZNF358Q9NW07 568 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 FAM8A1Q9UBU6 413 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 SUFUQ9UMX1 484 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 PIKFYVEQ9Y2I7 2098 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 EML5Q05BV3 1969 aa16.56■□□□□ 0.24
SNX1-203ENST00000558040 SLC5A10A0PJK1 596 aa16.55■□□□□ 0.24
SNX1-203ENST00000558040 BTN3A1O00481 513 aa16.55■□□□□ 0.24
SNX1-203ENST00000558040 ZBTB14O43829 449 aa16.55■□□□□ 0.24
SNX1-203ENST00000558040 GPC4O75487 556 aa16.55■□□□□ 0.24
SNX1-203ENST00000558040 SLCO2B1O94956 709 aa16.55■□□□□ 0.24
SNX1-203ENST00000558040 ETV4P43268 484 aa16.55■□□□□ 0.24
SNX1-203ENST00000558040 GNPDA1P46926 289 aa16.55■□□□□ 0.24
SNX1-203ENST00000558040 IL9RQ01113 521 aa16.55■□□□□ 0.24
SNX1-203ENST00000558040 RPA4Q13156 261 aa16.55■□□□□ 0.24
SNX1-203ENST00000558040 PYCR3Q53H96 274 aa16.55■□□□□ 0.24
SNX1-203ENST00000558040 TECRLQ5HYJ1 363 aa16.55■□□□□ 0.24
SNX1-203ENST00000558040 LYSMD4Q5XG99 296 aa16.55■□□□□ 0.24
SNX1-203ENST00000558040 NAPRTQ6XQN6 538 aa16.55■□□□□ 0.24
SNX1-203ENST00000558040 C11orf96Q7Z7L8 435 aa16.55■□□□□ 0.24
SNX1-203ENST00000558040 ADAMTSL2Q86TH1 951 aa16.55■□□□□ 0.24
SNX1-203ENST00000558040 TAX1BP1Q86VP1 789 aa16.55■□□□□ 0.24
SNX1-203ENST00000558040 CFAP206Q8IYR0 622 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms