RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 PALM2Q8IXS6 379 aa13.44□□□□□ -0.26
SHMT2-234ENST00000557703 ZBED8Q8IZ13 594 aa13.44□□□□□ -0.26
SHMT2-234ENST00000557703 AGGF1Q8N302 714 aaeCLIP13.44□□□□□ -0.26
SHMT2-234ENST00000557703 NOA1Q8NC60 698 aaKnown RBP13.44□□□□□ -0.26
SHMT2-234ENST00000557703 ASZ1Q8WWH4 475 aa13.44□□□□□ -0.26
SHMT2-234ENST00000557703 CERS2Q96G23 380 aa13.44□□□□□ -0.26
SHMT2-234ENST00000557703 P2RY12Q9H244 342 aa13.44□□□□□ -0.26
SHMT2-234ENST00000557703 EPB41L5Q9HCM4 733 aa13.44□□□□□ -0.26
SHMT2-234ENST00000557703 POT1Q9NUX5 634 aa13.44□□□□□ -0.26
SHMT2-234ENST00000557703 MOCS1Q9NZB8 636 aa13.44□□□□□ -0.26
SHMT2-234ENST00000557703 GULP1Q9UBP9 304 aa13.44□□□□□ -0.26
SHMT2-234ENST00000557703 TBC1D29Q9UFV1 150 aa13.44□□□□□ -0.26
SHMT2-234ENST00000557703 SLC23A2Q9UGH3 650 aa13.44□□□□□ -0.26
SHMT2-234ENST00000557703 KCNK6Q9Y257 313 aa13.44□□□□□ -0.26
SHMT2-234ENST00000557703 ST14Q9Y5Y6 855 aa13.44□□□□□ -0.26
SHMT2-234ENST00000557703 U3KQA8 63 aa13.44□□□□□ -0.26
SHMT2-234ENST00000557703 RHPN2P1A8MT19 583 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 B4DGG1 531 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 TMX2-CTNND1H3BSU7 103 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 S1PR4O95977 384 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 CA5AP35218 305 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 MAPK9P45984 424 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 EPHA4P54764 986 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 GPLD1P80108 840 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 ZNF658BQ4V348 819 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-234ENST00000557703 ZNF470Q6ECI4 717 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 CES3Q6UWW8 571 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 UNC5AQ6ZN44 842 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 TMPRSS12Q86WS5 348 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 ARL14Q8N4G2 192 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 CLDN19Q8N6F1 224 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 OTUD6BQ8N6M0 293 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 C2CD4AQ8NCU7 369 aaPredicted RBP13.43□□□□□ -0.26
SHMT2-234ENST00000557703 FBXO36Q8NEA4 188 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 LPGAT1Q92604 370 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 CDKL2Q92772 493 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 ABCG4Q9H172 646 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 CCDC68Q9H2F9 335 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 OSGEPL1Q9H4B0 414 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 ZDHHC18Q9NUE0 388 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 TOR4AQ9NXH8 423 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 LRIT1Q9P2V4 623 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 DMGDHQ9UI17 866 aaKnown RBP13.43□□□□□ -0.26
SHMT2-234ENST00000557703 FBXO5Q9UKT4 447 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 PRKAB1Q9Y478 270 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 COLEC10Q9Y6Z7 277 aa13.43□□□□□ -0.26
SHMT2-234ENST00000557703 RP1P56715 2156 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 UNC13CQ8NB66 2214 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 LILRA5A6NI73 299 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 PDZK1P1A8MUH7 402 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 IFRD1O00458 451 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-234ENST00000557703 KDM1AO60341 852 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 APOA4P06727 396 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 SLC35G4P0C7Q5 338 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 SKIV2L2P42285 1042 aaKnown RBP13.42□□□□□ -0.26
SHMT2-234ENST00000557703 SLC7A5Q01650 507 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 HHEXQ03014 270 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 MGAT5Q09328 741 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 SLMAPQ14BN4 828 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 TMED2Q15363 201 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 HSP90AA5PQ58FG0 334 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-234ENST00000557703 PTRHD1Q6GMV3 140 aaKnown RBP13.42□□□□□ -0.26
SHMT2-234ENST00000557703 ZDHHC24Q6UX98 284 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 DET1Q7L5Y6 550 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 SLC26A11Q86WA9 606 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 CFAP206Q8IYR0 622 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 KYQ8NBH2 561 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 IFI44Q8TCB0 444 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 KCNJ9Q92806 393 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 TMEM159Q96B96 161 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 BIRC8Q96P09 236 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 FMO2Q99518 471 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 SAYSD1Q9NPB0 183 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 MARCH4Q9P2E8 410 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-234ENST00000557703 CPNE7Q9UBL6 633 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 CHMP2BQ9UQN3 213 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 PLEKHM1Q9Y4G2 1056 aa13.42□□□□□ -0.26
SHMT2-234ENST00000557703 PCYT1BQ9Y5K3 369 aaPredicted RBP13.42□□□□□ -0.26
SHMT2-234ENST00000557703 CPED1A4D0V7 1026 aa13.41□□□□□ -0.26
SHMT2-234ENST00000557703 FAM221BA6H8Z2 402 aa13.41□□□□□ -0.26
SHMT2-234ENST00000557703 EIF3FO00303 357 aaPredicted RBP13.41□□□□□ -0.26
SHMT2-234ENST00000557703 OR1I1O60431 355 aa13.41□□□□□ -0.26
SHMT2-234ENST00000557703 SLCO2B1O94956 709 aa13.41□□□□□ -0.26
SHMT2-234ENST00000557703 VIPP01282 170 aa13.41□□□□□ -0.26
SHMT2-234ENST00000557703 PKMP14618 531 aaKnown RBP13.41□□□□□ -0.26
SHMT2-234ENST00000557703 ATP5DP30049 168 aa13.41□□□□□ -0.26
SHMT2-234ENST00000557703 MAGEA4P43358 317 aa13.41□□□□□ -0.26
SHMT2-234ENST00000557703 UBE2IP63279 158 aaKnown RBP13.41□□□□□ -0.26
SHMT2-234ENST00000557703 MRPS25P82663 173 aaKnown RBP13.41□□□□□ -0.26
SHMT2-234ENST00000557703 NAB1Q13506 487 aa13.41□□□□□ -0.26
SHMT2-234ENST00000557703 NFE2L1Q14494 772 aa13.41□□□□□ -0.26
SHMT2-234ENST00000557703 SEMA3AQ14563 771 aa13.41□□□□□ -0.26
SHMT2-234ENST00000557703 SMAD1Q15797 465 aaKnown RBP13.41□□□□□ -0.26
SHMT2-234ENST00000557703 PLEKHS1Q5SXH7 462 aa13.41□□□□□ -0.26
SHMT2-234ENST00000557703 CAPRIN2Q6IMN6 1127 aaKnown RBP13.41□□□□□ -0.26
SHMT2-234ENST00000557703 LRRC8EQ6NSJ5 796 aa13.41□□□□□ -0.26
SHMT2-234ENST00000557703 UGT3A1Q6NUS8 523 aa13.41□□□□□ -0.26
SHMT2-234ENST00000557703 KLHL35Q6PF15 583 aa13.41□□□□□ -0.26
SHMT2-234ENST00000557703 C3orf62Q6ZUJ4 267 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms