RNA–Protein interactions for RNA: ENST00000555773.5

SHMT2-221, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-221ENST00000555773 ELMO1Q92556 727 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 ATXN7L3BQ96GX2 97 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 ZIM3Q96PE6 472 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 NDNQ99608 321 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 GSDMCQ9BYG8 508 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 TMEM168Q9H0V1 697 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 SYTL2Q9HCH5 934 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 KLC4Q9NSK0 619 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 SLC23A2Q9UGH3 650 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 APOBEC3BQ9UH17 382 aaKnown RBP12.25□□□□□ -0.45
SHMT2-221ENST00000555773 TRMT6Q9UJA5 497 aaKnown RBP12.25□□□□□ -0.45
SHMT2-221ENST00000555773 MED16Q9Y2X0 877 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 PCYT1BQ9Y5K3 369 aaPredicted RBP12.25□□□□□ -0.45
SHMT2-221ENST00000555773 CSNK1G3Q9Y6M4 447 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 MYLKQ15746 1914 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 SCN8AQ9UQD0 1980 aa12.25□□□□□ -0.45
SHMT2-221ENST00000555773 A0A1B0GTQ1 180 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 SLC5A10A0PJK1 596 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 NEMP2A6NFY4 417 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 PATE3B3GLJ2 98 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 EIF3FO00303 357 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-221ENST00000555773 GPC4O75487 556 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 SLCO2B1O94956 709 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 CER1O95813 267 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 CBSLP0DN79 551 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 ITGB6P18564 788 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 IDSP22304 550 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 CBSP35520 551 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 SLC26A3P40879 764 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 SLCO1A2P46721 670 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 CDKN2DP55273 166 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 TAS2R39P59534 338 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 RAB10P61026 200 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 TIAL1Q01085 375 aaKnown RBP eCLIP12.24□□□□□ -0.45
SHMT2-221ENST00000555773 ZNF844Q08AG5 666 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 ZKSCAN8Q15776 578 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-221ENST00000555773 ZNF658BQ4V348 819 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-221ENST00000555773 PRRT3Q5FWE3 981 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 PRAMEF14Q5SWL7 426 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 LVRNQ6Q4G3 990 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 WASH2PQ6VEQ5 465 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 GKN2Q86XP6 184 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 ZBTB2Q8N680 514 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 EPS8L3Q8TE67 593 aaKnown RBP12.24□□□□□ -0.45
SHMT2-221ENST00000555773 NAT14Q8WUY8 206 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 ISL2Q96A47 359 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 TMEM159Q96B96 161 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 RUFY1Q96T51 708 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 GPR21Q99679 349 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 TCEAL2Q9H3H9 227 aaPredicted RBP12.24□□□□□ -0.45
SHMT2-221ENST00000555773 DPEP2Q9H4A9 486 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 GAREM1Q9H706 876 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 WASH6PQ9NQA3 447 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 TM7SF3Q9NS93 570 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 EURLQ9NYK6 297 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 GULP1Q9UBP9 304 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 LGALS13Q9UHV8 139 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 TLK1Q9UKI8 766 aa12.24□□□□□ -0.45
SHMT2-221ENST00000555773 CACNA1EQ15878 2313 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 PRR19A6NJB7 356 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 TRIM49D1C9J1S8 452 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 MAP2K7O14733 419 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 AQP9O43315 295 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 ATP8B1O43520 1251 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 PIAS2O75928 621 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 MT-ND3P03897 115 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 ENO3P13929 434 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-221ENST00000555773 ENGP17813 658 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 SAT1P21673 171 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 DGKAP23743 735 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 TYK2P29597 1187 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 ATP5DP30049 168 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 RGS4P49798 205 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 SERPINB8P50452 374 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 ATXN3P54252 364 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-221ENST00000555773 HSPA14Q0VDF9 509 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 PDAP1Q13442 181 aaKnown RBP12.23□□□□□ -0.45
SHMT2-221ENST00000555773 BMPR2Q13873 1038 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 CSRP2Q16527 193 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 KRT71Q3SY84 523 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 SYTL3Q4VX76 610 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 CEP85LQ5SZL2 805 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 LRRC8EQ6NSJ5 796 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 TAF8Q7Z7C8 310 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 NRROSQ86YC3 692 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 NKAPQ8N5F7 415 aaKnown RBP12.23□□□□□ -0.45
SHMT2-221ENST00000555773 SIDT2Q8NBJ9 832 aaKnown RBP12.23□□□□□ -0.45
SHMT2-221ENST00000555773 ACVR1CQ8NER5 493 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 LKAAEAR1Q8TD35 194 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 CD200R1Q8TD46 325 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 ACMSDQ8TDX5 336 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 LMX1AQ8TE12 382 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 PDLIM5Q96HC4 596 aaKnown RBP12.23□□□□□ -0.45
SHMT2-221ENST00000555773 CABS1Q96KC9 395 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 OLFM1Q99784 485 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 LRRC61Q9BV99 259 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 COG4Q9H9E3 785 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 GPAMQ9HCL2 828 aa12.23□□□□□ -0.45
SHMT2-221ENST00000555773 SARS2Q9NP81 518 aaKnown RBP12.23□□□□□ -0.45
SHMT2-221ENST00000555773 FAM86C1Q9NVL1 165 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms