RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 POLBP06746 335 aa13.39□□□□□ -0.27
SNX6-203ENST00000555416 ITGA2BP08514 1039 aa13.39□□□□□ -0.27
SNX6-203ENST00000555416 VCLP18206 1134 aa13.39□□□□□ -0.27
SNX6-203ENST00000555416 MGAT1P26572 445 aa13.39□□□□□ -0.27
SNX6-203ENST00000555416 NMBRP28336 390 aa13.39□□□□□ -0.27
SNX6-203ENST00000555416 RBMS1P29558 406 aaKnown RBP13.39□□□□□ -0.27
SNX6-203ENST00000555416 EPHA4P54764 986 aa13.39□□□□□ -0.27
SNX6-203ENST00000555416 GFERP55789 205 aa13.39□□□□□ -0.27
SNX6-203ENST00000555416 SKIDA1Q1XH10 827 aa13.39□□□□□ -0.27
SNX6-203ENST00000555416 SNAP47Q5SQN1 464 aa13.39□□□□□ -0.27
SNX6-203ENST00000555416 TMEM71Q6P5X7 295 aa13.39□□□□□ -0.27
SNX6-203ENST00000555416 CLEC14AQ86T13 490 aa13.39□□□□□ -0.27
SNX6-203ENST00000555416 LDB1Q86U70 411 aaPredicted RBP13.39□□□□□ -0.27
SNX6-203ENST00000555416 TRIM48Q8IWZ4 208 aa13.39□□□□□ -0.27
SNX6-203ENST00000555416 LSMEM2Q8N112 164 aa13.39□□□□□ -0.27
SNX6-203ENST00000555416 C17orf53Q8N3J3 647 aaPredicted RBP13.39□□□□□ -0.27
SNX6-203ENST00000555416 MPP5Q8N3R9 675 aa13.39□□□□□ -0.27
SNX6-203ENST00000555416 ACTRT1Q8TDG2 376 aa13.39□□□□□ -0.27
SNX6-203ENST00000555416 RSC1A1Q92681 617 aa13.39□□□□□ -0.27
SNX6-203ENST00000555416 ANP32BQ92688 251 aaKnown RBP13.39□□□□□ -0.27
SNX6-203ENST00000555416 SH3KBP1Q96B97 665 aa13.39□□□□□ -0.27
SNX6-203ENST00000555416 AHCYL2Q96HN2 611 aaKnown RBP13.39□□□□□ -0.27
SNX6-203ENST00000555416 ZNF514Q96K75 400 aaPredicted RBP13.39□□□□□ -0.27
SNX6-203ENST00000555416 LINC00615Q96LM1 132 aaPredicted RBP13.39□□□□□ -0.27
SNX6-203ENST00000555416 RMDN2Q96LZ7 410 aa13.39□□□□□ -0.27
SNX6-203ENST00000555416 NRTNQ99748 197 aa13.39□□□□□ -0.27
SNX6-203ENST00000555416 TRIM56Q9BRZ2 755 aaKnown RBP13.39□□□□□ -0.27
SNX6-203ENST00000555416 UCK1Q9HA47 277 aa13.39□□□□□ -0.27
SNX6-203ENST00000555416 SYBUQ9NX95 663 aa13.39□□□□□ -0.27
SNX6-203ENST00000555416 FOXJ2Q9P0K8 574 aa13.39□□□□□ -0.27
SNX6-203ENST00000555416 MARCH4Q9P2E8 410 aaPredicted RBP13.39□□□□□ -0.27
SNX6-203ENST00000555416 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.38□□□□□ -0.27
SNX6-203ENST00000555416 A8MU76 341 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 TMX2-CTNND1H3BSU7 103 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 DUX1O43812 170 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 KCNJ13O60928 360 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 FGF3P11487 239 aaPredicted RBP13.38□□□□□ -0.27
SNX6-203ENST00000555416 TPSB2P20231 275 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 ARNTP27540 789 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 PDHA2P29803 388 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 SLC5A2P31639 672 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 MAGEA6P43360 314 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 LEPRP48357 1165 aaKnown RBP13.38□□□□□ -0.27
SNX6-203ENST00000555416 PPM1FP49593 454 aaPredicted RBP13.38□□□□□ -0.27
SNX6-203ENST00000555416 GNG11P61952 73 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 PPP1CAP62136 330 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 EIF3IQ13347 325 aaKnown RBP13.38□□□□□ -0.27
SNX6-203ENST00000555416 TPSAB1Q15661 275 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 CLPPQ16740 277 aaPredicted RBP13.38□□□□□ -0.27
SNX6-203ENST00000555416 PCID2Q5JVF3 399 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 CCDC137Q6PK04 289 aaKnown RBP13.38□□□□□ -0.27
SNX6-203ENST00000555416 WDR74Q6RFH5 385 aaPredicted RBP13.38□□□□□ -0.27
SNX6-203ENST00000555416 CES3Q6UWW8 571 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 C4orf22Q6V702 233 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 NAPRTQ6XQN6 538 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 ARHGAP22Q7Z5H3 698 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 CAND1Q86VP6 1230 aaKnown RBP13.38□□□□□ -0.27
SNX6-203ENST00000555416 SPACA3Q8IXA5 215 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 CFAP206Q8IYR0 622 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 HM13Q8TCT9 377 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 CPT1BQ92523 772 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 CXorf40BQ96DE9 158 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 STN1Q9H668 368 aaKnown RBP13.38□□□□□ -0.27
SNX6-203ENST00000555416 THSD1Q9NS62 852 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 TREX1Q9NSU2 369 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 POT1Q9NUX5 634 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 IMP3Q9NV31 184 aaKnown RBP13.38□□□□□ -0.27
SNX6-203ENST00000555416 OCIAD1Q9NX40 245 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 KLHL3Q9UH77 587 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 RIMKLBQ9ULI2 386 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 PIKFYVEQ9Y2I7 2098 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 PTPRQQ9UMZ3 2332 aa13.38□□□□□ -0.27
SNX6-203ENST00000555416 C9orf172C9J069 976 aa13.37□□□□□ -0.27
SNX6-203ENST00000555416 CES2O00748 559 aa13.37□□□□□ -0.27
SNX6-203ENST00000555416 ZW10O43264 779 aa13.37□□□□□ -0.27
SNX6-203ENST00000555416 KIF1CO43896 1103 aaKnown RBP13.37□□□□□ -0.27
SNX6-203ENST00000555416 PRAMEF10O60809 474 aa13.37□□□□□ -0.27
SNX6-203ENST00000555416 PHF2O75151 1096 aa13.37□□□□□ -0.27
SNX6-203ENST00000555416 UBXN7O94888 489 aa13.37□□□□□ -0.27
SNX6-203ENST00000555416 GAS8O95995 478 aa13.37□□□□□ -0.27
SNX6-203ENST00000555416 JMJD7P0C870 316 aa13.37□□□□□ -0.27
SNX6-203ENST00000555416 RALBP11234 206 aa13.37□□□□□ -0.27
SNX6-203ENST00000555416 MTHFD1P11586 935 aaKnown RBP13.37□□□□□ -0.27
SNX6-203ENST00000555416 PREPP48147 710 aa13.37□□□□□ -0.27
SNX6-203ENST00000555416 MAPK10P53779 464 aa13.37□□□□□ -0.27
SNX6-203ENST00000555416 PCBP4P57723 403 aaKnown RBP13.37□□□□□ -0.27
SNX6-203ENST00000555416 GSE1Q14687 1217 aa13.37□□□□□ -0.27
SNX6-203ENST00000555416 CAPRIN2Q6IMN6 1127 aaKnown RBP13.37□□□□□ -0.27
SNX6-203ENST00000555416 LRRC8BQ6P9F7 803 aa13.37□□□□□ -0.27
SNX6-203ENST00000555416 AFTPHQ6ULP2 937 aa13.37□□□□□ -0.27
SNX6-203ENST00000555416 JAMLQ86YT9 394 aa13.37□□□□□ -0.27
SNX6-203ENST00000555416 AGGF1Q8N302 714 aaeCLIP13.37□□□□□ -0.27
SNX6-203ENST00000555416 PPHLN1Q8NEY8 458 aaKnown RBP13.37□□□□□ -0.27
SNX6-203ENST00000555416 OR6P1Q8NGX9 317 aa13.37□□□□□ -0.27
SNX6-203ENST00000555416 OR4L1Q8NH43 312 aa13.37□□□□□ -0.27
SNX6-203ENST00000555416 HEXDCQ8WVB3 486 aa13.37□□□□□ -0.27
SNX6-203ENST00000555416 USP7Q93009 1102 aa13.37□□□□□ -0.27
SNX6-203ENST00000555416 C12orf66Q96MD2 445 aa13.37□□□□□ -0.27
SNX6-203ENST00000555416 CMKLR1Q99788 373 aa13.37□□□□□ -0.27
SNX6-203ENST00000555416 CCM2Q9BSQ5 444 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms