RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 SCHIP1Q9P0W5 487 aaPredicted RBP11.87□□□□□ -0.51
SRP54-206ENST00000555317 RNF14Q9UBS8 474 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 PSMD13Q9UNM6 376 aa11.87□□□□□ -0.51
SRP54-206ENST00000555317 COL27A1Q8IZC6 1860 aaPredicted RBP11.87□□□□□ -0.51
SRP54-206ENST00000555317 IGLV3-16A0A075B6K0 115 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 TCRBV7S3A2A0A539 114 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 GOLGA8MH3BSY2 632 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 CCDC188H7C350 402 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 IFRD1O00458 451 aaPredicted RBP11.86□□□□□ -0.51
SRP54-206ENST00000555317 PLD2O14939 933 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 CASC3O15234 703 aaKnown RBP11.86□□□□□ -0.51
SRP54-206ENST00000555317 POLBP06746 335 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 OR56A5P0C7T3 313 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 MLNP12872 115 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 AMD1P17707 334 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 PSMA3P25788 255 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 CD1CP29017 333 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 TTPAP49638 278 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 DR1Q01658 176 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 ACVR1Q04771 509 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 PLCL1Q15111 1095 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 KCTD19Q17RG1 926 aaPredicted RBP11.86□□□□□ -0.51
SRP54-206ENST00000555317 ANKRD22Q5VYY1 191 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 METRNLQ641Q3 311 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 PACS1Q6VY07 963 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 FAM83HQ6ZRV2 1179 aaPredicted RBP11.86□□□□□ -0.51
SRP54-206ENST00000555317 TMEM26Q6ZUK4 368 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 SYDE1Q6ZW31 735 aaPredicted RBP11.86□□□□□ -0.51
SRP54-206ENST00000555317 RAB11FIP2Q7L804 512 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 PCGF5Q86SE9 256 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 JAMLQ86YT9 394 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 CREG2Q8IUH2 290 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 C17orf53Q8N3J3 647 aaPredicted RBP11.86□□□□□ -0.51
SRP54-206ENST00000555317 MCUQ8NE86 351 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 OR4D9Q8NGE8 314 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 CPT1BQ92523 772 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 NCSTNQ92542 709 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 LINC00615Q96LM1 132 aaPredicted RBP11.86□□□□□ -0.51
SRP54-206ENST00000555317 CCDC74BQ96LY2 380 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 C12orf66Q96MD2 445 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 ZNF778Q96MU6 729 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 WWP1Q9H0M0 922 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 KCND1Q9NSA2 647 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 PCYOX1Q9UHG3 505 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 SOX13Q9UN79 622 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 LOXL2Q9Y4K0 774 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 PCDHGA8Q9Y5G5 932 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 HEBP2Q9Y5Z4 205 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 AHCTF1Q8WYP5 2266 aa11.86□□□□□ -0.51
SRP54-206ENST00000555317 C17orf113A0A1B0GUU1 675 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 MAGEB16A2A368 324 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 PRR19A6NJB7 356 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 SDR42E2A6NKP2 422 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 AGRPO00253 132 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 HGSO14964 777 aaPredicted RBP11.85□□□□□ -0.51
SRP54-206ENST00000555317 CD3EAPO15446 510 aaKnown RBP11.85□□□□□ -0.51
SRP54-206ENST00000555317 RRP8O43159 456 aaKnown RBP11.85□□□□□ -0.51
SRP54-206ENST00000555317 AVILO75366 819 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 TMEM63AO94886 807 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 UBXN7O94888 489 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 TNFSF15O95150 251 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 MTHFD1P11586 935 aaKnown RBP11.85□□□□□ -0.51
SRP54-206ENST00000555317 BRAFP15056 766 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 CSTF2P33240 577 aaKnown RBP eCLIP11.85□□□□□ -0.51
SRP54-206ENST00000555317 SLC19A1P41440 591 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 MLLT3P42568 568 aaPredicted RBP11.85□□□□□ -0.51
SRP54-206ENST00000555317 TRA2AQ13595 282 aaKnown RBP eCLIP11.85□□□□□ -0.51
SRP54-206ENST00000555317 PTK6Q13882 451 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 GPR18Q14330 331 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 CLCA4Q14CN2 919 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 RPE65Q16518 533 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 TBC1D25Q3MII6 688 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 DNAJC21Q5F1R6 531 aaKnown RBP11.85□□□□□ -0.51
SRP54-206ENST00000555317 SNAP47Q5SQN1 464 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 MRNIPQ6NTE8 343 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 KLHL35Q6PF15 583 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 WDR74Q6RFH5 385 aaPredicted RBP11.85□□□□□ -0.51
SRP54-206ENST00000555317 ZNF534Q76KX8 674 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 SDCCAG8Q86SQ7 713 aaPredicted RBP11.85□□□□□ -0.51
SRP54-206ENST00000555317 PLXDC1Q8IUK5 500 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 SLITRK4Q8IW52 837 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 MPP5Q8N3R9 675 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 CLDN19Q8N6F1 224 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 ELMO1Q92556 727 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 SLCO2A1Q92959 643 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 CCDC97Q96F63 343 aaPredicted RBP11.85□□□□□ -0.51
SRP54-206ENST00000555317 ZNF578Q96N58 590 aaPredicted RBP11.85□□□□□ -0.51
SRP54-206ENST00000555317 SERPINB12Q96P63 405 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 DCBLD2Q96PD2 775 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 KIFC1Q9BW19 673 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 TBC1D10AQ9BXI6 508 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 SEMA6CQ9H3T2 930 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 COG4Q9H9E3 785 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 SLC40A1Q9NP59 571 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 TREX1Q9NSU2 369 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 ZNF624Q9P2J8 865 aaPredicted RBP11.85□□□□□ -0.51
SRP54-206ENST00000555317 PISDQ9UG56 409 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 WDR37Q9Y2I8 494 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 RAXQ9Y2V3 346 aa11.85□□□□□ -0.51
SRP54-206ENST00000555317 NEU2Q9Y3R4 380 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms