RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 CDK14O94921 469 aa10.59□□□□□ -0.71
TDP1-211ENST00000555178 TSPAN12O95859 305 aa10.59□□□□□ -0.71
TDP1-211ENST00000555178 CELA2BP08218 269 aaPredicted RBP10.59□□□□□ -0.71
TDP1-211ENST00000555178 CRABP2P29373 138 aa10.59□□□□□ -0.71
TDP1-211ENST00000555178 AKT2P31751 481 aa10.59□□□□□ -0.71
TDP1-211ENST00000555178 CCR7P32248 378 aa10.59□□□□□ -0.71
TDP1-211ENST00000555178 PPARGP37231 505 aaPredicted RBP10.59□□□□□ -0.71
TDP1-211ENST00000555178 ETV4P43268 484 aa10.59□□□□□ -0.71
TDP1-211ENST00000555178 LDLRAP1Q5SW96 308 aa10.59□□□□□ -0.71
TDP1-211ENST00000555178 ENPP7Q6UWV6 458 aa10.59□□□□□ -0.71
TDP1-211ENST00000555178 FAM83HQ6ZRV2 1179 aaPredicted RBP10.59□□□□□ -0.71
TDP1-211ENST00000555178 RD3Q7Z3Z2 195 aa10.59□□□□□ -0.71
TDP1-211ENST00000555178 EEF1AKMT1Q8WVE0 214 aa10.59□□□□□ -0.71
TDP1-211ENST00000555178 DNASE2BQ8WZ79 361 aa10.59□□□□□ -0.71
TDP1-211ENST00000555178 PTERQ96BW5 349 aa10.59□□□□□ -0.71
TDP1-211ENST00000555178 TSPAN17Q96FV3 270 aa10.59□□□□□ -0.71
TDP1-211ENST00000555178 UBXN10Q96LJ8 280 aa10.59□□□□□ -0.71
TDP1-211ENST00000555178 MKS1Q9NXB0 559 aa10.59□□□□□ -0.71
TDP1-211ENST00000555178 CPSF2Q9P2I0 782 aaKnown RBP10.59□□□□□ -0.71
TDP1-211ENST00000555178 TRMT6Q9UJA5 497 aaKnown RBP10.59□□□□□ -0.71
TDP1-211ENST00000555178 SMG5Q9UPR3 1016 aaKnown RBP10.59□□□□□ -0.71
TDP1-211ENST00000555178 KRT87PA6NCN2 255 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 ZBTB14O43829 449 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 GLRA3O75311 464 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 SBK3P0C264 359 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 THEGLP0DJG4 465 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 MYCLP1P12525 358 aaPredicted RBP10.58□□□□□ -0.72
TDP1-211ENST00000555178 CCT5P48643 541 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 EIF2B5Q13144 721 aaKnown RBP10.58□□□□□ -0.72
TDP1-211ENST00000555178 BOP1Q14137 746 aaKnown RBP10.58□□□□□ -0.72
TDP1-211ENST00000555178 FZD2Q14332 565 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 ZNF658BQ4V348 819 aaPredicted RBP10.58□□□□□ -0.72
TDP1-211ENST00000555178 SLC36A4Q6YBV0 504 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 LPCAT2Q7L5N7 544 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 PIWIL4Q7Z3Z4 852 aaKnown RBP10.58□□□□□ -0.72
TDP1-211ENST00000555178 TBC1D1Q86TI0 1168 aaPredicted RBP10.58□□□□□ -0.72
TDP1-211ENST00000555178 TRAPPC5Q8IUR0 188 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 DENND6BQ8NEG7 585 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 PRSS33Q8NF86 280 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 ALKBH8Q96BT7 664 aaKnown RBP10.58□□□□□ -0.72
TDP1-211ENST00000555178 IQCGQ9H095 443 aaKnown RBP10.58□□□□□ -0.72
TDP1-211ENST00000555178 ACSS2Q9NR19 701 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 GPR27Q9NS67 375 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 ZSCAN32Q9NX65 697 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 XPR1Q9UBH6 696 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 MOSPD1Q9UJG1 213 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 SUFUQ9UMX1 484 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 HS3ST3A1Q9Y663 406 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 PLIN3O60664 434 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 KLHL2O95198 593 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 SLC34A2O95436 690 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 PROCP04070 461 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 KCNC1P48547 511 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 TCF15Q12870 199 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 NFATC4Q14934 902 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 ALG11Q2TAA5 492 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 ACSBG2Q5FVE4 666 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 LRRC8EQ6NSJ5 796 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 KYAT3Q6YP21 454 aaKnown RBP10.58□□□□□ -0.72
TDP1-211ENST00000555178 PRR23BQ6ZRT6 265 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 TAX1BP1Q86VP1 789 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 FSTL5Q8N475 847 aaPredicted RBP10.58□□□□□ -0.72
TDP1-211ENST00000555178 TMEM151AQ8N4L1 468 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 MOCOSQ96EN8 888 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 LINGO1Q96FE5 620 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 NRTNQ99748 197 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 CYP4F12Q9HCS2 524 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 PHPT1Q9NRX4 125 aaPredicted RBP10.58□□□□□ -0.72
TDP1-211ENST00000555178 INTS9Q9NV88 658 aaKnown RBP10.58□□□□□ -0.72
TDP1-211ENST00000555178 NKIRAS1Q9NYS0 192 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.58□□□□□ -0.72
TDP1-211ENST00000555178 ADAM21Q9UKJ8 722 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 SLC17A4Q9Y2C5 497 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 PCDH15Q96QU1 1955 aa10.58□□□□□ -0.72
TDP1-211ENST00000555178 GOLGA4Q13439 2230 aaKnown RBP10.57□□□□□ -0.72
TDP1-211ENST00000555178 A0A087X1B8 175 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 CFAP99D6REC4 459 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 CDC7O00311 574 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 CHUKO15111 745 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 NUAK1O60285 661 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 ZWINTO95229 277 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 EML2O95834 649 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 OR56A5P0C7T3 313 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 RALBP11234 206 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 CD1DP15813 335 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 CD38P28907 300 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 PDHA2P29803 388 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 PREPP48147 710 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 PRLHRP49683 370 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 HSPA14Q0VDF9 509 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 OR4D1Q15615 310 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 CES4AQ5XG92 561 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 OTOAQ7RTW8 1153 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 ZBTB2Q8N680 514 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 CCDC63Q8NA47 563 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 OR2I1PQ8NGU4 316 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 EXT2Q93063 718 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 CABS1Q96KC9 395 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 SCYL1Q96KG9 808 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 C1QTNF7Q9BXJ2 289 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms