RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 C17orf67Q0P5P2 114 aa5.29□□□□□ -1.56
PSEN1-211ENST00000554995 TROAPQ12815 778 aa5.29□□□□□ -1.56
PSEN1-211ENST00000554995 GAGE2BQ13066 116 aa5.29□□□□□ -1.56
PSEN1-211ENST00000554995 PRTGQ2VWP7 1150 aa5.29□□□□□ -1.56
PSEN1-211ENST00000554995 GAGE2EQ4V326 116 aa5.29□□□□□ -1.56
PSEN1-211ENST00000554995 FAM91A1Q658Y4 838 aa5.29□□□□□ -1.56
PSEN1-211ENST00000554995 GAGE2AQ6NT46 116 aa5.29□□□□□ -1.56
PSEN1-211ENST00000554995 RGMBQ6NW40 437 aa5.29□□□□□ -1.56
PSEN1-211ENST00000554995 C11orf57Q6ZUT1 292 aaPredicted RBP5.29□□□□□ -1.56
PSEN1-211ENST00000554995 RAPH1Q70E73 1250 aa5.29□□□□□ -1.56
PSEN1-211ENST00000554995 SPATA21Q7Z572 469 aa5.29□□□□□ -1.56
PSEN1-211ENST00000554995 ZSCAN30Q86W11 494 aa5.29□□□□□ -1.56
PSEN1-211ENST00000554995 ARL10Q8N8L6 244 aa5.29□□□□□ -1.56
PSEN1-211ENST00000554995 PAPD5Q8NDF8 572 aaKnown RBP5.29□□□□□ -1.56
PSEN1-211ENST00000554995 GRAPLQ8TC17 118 aaPredicted RBP5.29□□□□□ -1.56
PSEN1-211ENST00000554995 ATL1Q8WXF7 558 aa5.29□□□□□ -1.56
PSEN1-211ENST00000554995 DNAAF4Q8WXU2 420 aa5.29□□□□□ -1.56
PSEN1-211ENST00000554995 SNX21Q969T3 373 aa5.29□□□□□ -1.56
PSEN1-211ENST00000554995 SLAMF9Q96A28 289 aa5.29□□□□□ -1.56
PSEN1-211ENST00000554995 NLRP4Q96MN2 994 aa5.29□□□□□ -1.56
PSEN1-211ENST00000554995 PCYT2Q99447 389 aa5.29□□□□□ -1.56
PSEN1-211ENST00000554995 MTERF1Q99551 399 aaKnown RBP5.29□□□□□ -1.56
PSEN1-211ENST00000554995 SEPHS2Q99611 448 aa5.29□□□□□ -1.56
PSEN1-211ENST00000554995 KATNB1Q9BVA0 655 aa5.29□□□□□ -1.56
PSEN1-211ENST00000554995 DPAGT1Q9H3H5 408 aa5.29□□□□□ -1.56
PSEN1-211ENST00000554995 GAGE2DQ9UEU5 116 aa5.29□□□□□ -1.56
PSEN1-211ENST00000554995 LIPT1Q9Y234 373 aa5.29□□□□□ -1.56
PSEN1-211ENST00000554995 WDR33Q9C0J8 1336 aaKnown RBP5.28□□□□□ -1.56
PSEN1-211ENST00000554995 A0A1W2PP11 408 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 RPS10-NUDT3A0A1W2PQS6 291 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 GOLGA6L9A6NEM1 432 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 PTGESO14684 152 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 SPRY3O43610 288 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 FSHBP01225 129 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 RAB40ALP0C0E4 278 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 EEF1B2P24534 225 aaKnown RBP5.28□□□□□ -1.56
PSEN1-211ENST00000554995 CTSCP53634 463 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 NAGLUP54802 743 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 CRYZQ08257 329 aaKnown RBP5.28□□□□□ -1.56
PSEN1-211ENST00000554995 GPS2Q13227 327 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 RRS1Q15050 365 aaKnown RBP5.28□□□□□ -1.56
PSEN1-211ENST00000554995 CCDC92Q53HC0 331 aaPredicted RBP5.28□□□□□ -1.56
PSEN1-211ENST00000554995 FAM69BQ5VUD6 431 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 SFMBT2Q5VUG0 894 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 MOXD1Q6UVY6 613 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 LINC00696Q6ZRV3 163 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 MEPCEQ7L2J0 689 aaKnown RBP5.28□□□□□ -1.56
PSEN1-211ENST00000554995 DSG4Q86SJ6 1040 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 HOOK3Q86VS8 718 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 PRIMA1Q86XR5 153 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 TUSC5Q8IXB3 177 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 SYCP3Q8IZU3 236 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 NANOGP1Q8N7R0 232 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 SPC24Q8NBT2 197 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 ATAD1Q8NBU5 361 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 OR5R1Q8NH85 324 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 THAP6Q8TBB0 222 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 FAM81BQ96LP2 452 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 MUS81Q96NY9 551 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 FNDC11Q9BVV2 318 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 DPP3Q9NY33 737 aa5.28□□□□□ -1.56
PSEN1-211ENST00000554995 A0A1B0GVT2 93 aa5.27□□□□□ -1.57
PSEN1-211ENST00000554995 OR2M5A3KFT3 312 aa5.27□□□□□ -1.57
PSEN1-211ENST00000554995 TMEM221A6NGB7 291 aa5.27□□□□□ -1.57
PSEN1-211ENST00000554995 MEIS2O14770 477 aa5.27□□□□□ -1.57
PSEN1-211ENST00000554995 C21orf33P30042 268 aaPredicted RBP5.27□□□□□ -1.57
PSEN1-211ENST00000554995 ATP6V1E1P36543 226 aa5.27□□□□□ -1.57
PSEN1-211ENST00000554995 AMTP48728 403 aa5.27□□□□□ -1.57
PSEN1-211ENST00000554995 ALDH3A2P51648 485 aa5.27□□□□□ -1.57
PSEN1-211ENST00000554995 SRSF4Q08170 494 aaKnown RBP5.27□□□□□ -1.57
PSEN1-211ENST00000554995 COASYQ13057 564 aa5.27□□□□□ -1.57
PSEN1-211ENST00000554995 ANKRD20A4Q4UJ75 823 aa5.27□□□□□ -1.57
PSEN1-211ENST00000554995 ANKRD20A8PQ5CZ79 823 aa5.27□□□□□ -1.57
PSEN1-211ENST00000554995 ANKRD20A2Q5SQ80 823 aa5.27□□□□□ -1.57
PSEN1-211ENST00000554995 ANKRD20A1Q5TYW2 823 aa5.27□□□□□ -1.57
PSEN1-211ENST00000554995 ANKRD20A3Q5VUR7 823 aa5.27□□□□□ -1.57
PSEN1-211ENST00000554995 ZNF626Q68DY1 528 aa5.27□□□□□ -1.57
PSEN1-211ENST00000554995 C10orf53Q8N6V4 93 aa5.27□□□□□ -1.57
PSEN1-211ENST00000554995 SLC16A11Q8NCK7 471 aa5.27□□□□□ -1.57
PSEN1-211ENST00000554995 CTCFLQ8NI51 663 aaPredicted RBP5.27□□□□□ -1.57
PSEN1-211ENST00000554995 OCC1Q8TAD7 63 aa5.27□□□□□ -1.57
PSEN1-211ENST00000554995 HES6Q96HZ4 224 aa5.27□□□□□ -1.57
PSEN1-211ENST00000554995 CCDC43Q96MW1 224 aaKnown RBP5.27□□□□□ -1.57
PSEN1-211ENST00000554995 ZNF582Q96NG8 517 aaPredicted RBP5.27□□□□□ -1.57
PSEN1-211ENST00000554995 CAMK1GQ96NX5 476 aa5.27□□□□□ -1.57
PSEN1-211ENST00000554995 SORCS2Q96PQ0 1159 aa5.27□□□□□ -1.57
PSEN1-211ENST00000554995 SEMA6AQ9H2E6 1030 aa5.27□□□□□ -1.57
PSEN1-211ENST00000554995 FOXP1Q9H334 677 aaPredicted RBP5.27□□□□□ -1.57
PSEN1-211ENST00000554995 HHATLQ9HCP6 504 aa5.27□□□□□ -1.57
PSEN1-211ENST00000554995 POLLQ9UGP5 575 aa5.27□□□□□ -1.57
PSEN1-211ENST00000554995 ARMCX3Q9UH62 379 aaPredicted RBP5.27□□□□□ -1.57
PSEN1-211ENST00000554995 AGO1Q9UL18 857 aaKnown RBP5.27□□□□□ -1.57
PSEN1-211ENST00000554995 CDH7Q9ULB5 785 aa5.27□□□□□ -1.57
PSEN1-211ENST00000554995 FZD10Q9ULW2 581 aa5.27□□□□□ -1.57
PSEN1-211ENST00000554995 PRSS51A0A1B0GVH4 220 aa5.26□□□□□ -1.57
PSEN1-211ENST00000554995 A0A1W2PPQ1 181 aa5.26□□□□□ -1.57
PSEN1-211ENST00000554995 INAFM1C9JVW0 142 aa5.26□□□□□ -1.57
PSEN1-211ENST00000554995 FAM86B1E9PN63 330 aa5.26□□□□□ -1.57
PSEN1-211ENST00000554995 CLDN4O14493 209 aa5.26□□□□□ -1.57
PSEN1-211ENST00000554995 IFIT3O14879 490 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms