RNA–Protein interactions for RNA: ENST00000554636.1

VTI1B-203, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 3

Gene VTI1B, Length 565 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-203ENST00000554636 DRD3P35462 400 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 PTPN9P43378 593 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 NSFP46459 744 aaKnown RBP4.22□□□□□ -1.73
VTI1B-203ENST00000554636 CLK3P49761 638 aaKnown RBP4.22□□□□□ -1.73
VTI1B-203ENST00000554636 NOVA1P51513 510 aaKnown RBP4.22□□□□□ -1.73
VTI1B-203ENST00000554636 METAP1P53582 386 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 GALCP54803 685 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 ADPRHP54922 357 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 HDAC4P56524 1084 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 CTXN1P60606 82 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 ARF5P84085 180 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 OGDHQ02218 1023 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 ZNF177Q13360 481 aaPredicted RBP4.22□□□□□ -1.73
VTI1B-203ENST00000554636 ELAVL3Q14576 367 aaKnown RBP4.22□□□□□ -1.73
VTI1B-203ENST00000554636 ERCC6LQ2NKX8 1250 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 C15orf59Q2T9L4 293 aaPredicted RBP4.22□□□□□ -1.73
VTI1B-203ENST00000554636 KLHL40Q2TBA0 621 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 TTC31Q49AM3 519 aaPredicted RBP4.22□□□□□ -1.73
VTI1B-203ENST00000554636 WDR45BQ5MNZ6 344 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 SYCP2LQ5T4T6 812 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 FAM72AQ5TYM5 149 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 KIAA0895LQ68EN5 471 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 FAM72DQ6L9T8 149 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 ARMC6Q6NXE6 501 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 C22orf39Q6P5X5 142 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 NCEH1Q6PIU2 408 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 LAYNQ6UX15 382 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 Q6ZNX1 250 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 STRADAQ7RTN6 431 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 IRF2BP2Q7Z5L9 587 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 RABEPKQ7Z6M1 372 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 TFAP2DQ7Z6R9 452 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 NLRP14Q86W24 1093 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 FAM72BQ86X60 149 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 ZNF575Q86XF7 245 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 MMAAQ8IVH4 418 aaKnown RBP4.22□□□□□ -1.73
VTI1B-203ENST00000554636 CCDC117Q8IWD4 279 aaPredicted RBP4.22□□□□□ -1.73
VTI1B-203ENST00000554636 HDDC3Q8N4P3 179 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 SH2D3CQ8N5H7 860 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 MINDY1Q8N5J2 469 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 CCDC185Q8N715 623 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 C3orf20Q8ND61 904 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 DEFB124Q8NES8 71 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 IFI44Q8TCB0 444 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 CENPIQ92674 756 aaPredicted RBP4.22□□□□□ -1.73
VTI1B-203ENST00000554636 NTAN1Q96AB6 310 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 CLPTM1LQ96KA5 538 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 C1orf74Q96LT6 269 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 NAP1L5Q96NT1 182 aaPredicted RBP4.22□□□□□ -1.73
VTI1B-203ENST00000554636 HAPLN3Q96S86 360 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 AGPAT1Q99943 283 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 FEM1AQ9BSK4 669 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 SELENOOQ9BVL4 669 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 GTPBP2Q9BX10 602 aaKnown RBP4.22□□□□□ -1.73
VTI1B-203ENST00000554636 PACSIN1Q9BY11 444 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 BTBD1Q9H0C5 482 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 SIK2Q9H0K1 926 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 NEUROG2Q9H2A3 272 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 WDCPQ9H6R7 721 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 UNKLQ9H9P5 680 aaKnown RBP4.22□□□□□ -1.73
VTI1B-203ENST00000554636 EBF2Q9HAK2 575 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 TM9SF3Q9HD45 589 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 TMEM51Q9NW97 253 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 FBXL12Q9NXK8 326 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 TAS2R14Q9NYV8 317 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 MPP6Q9NZW5 540 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 VPS51Q9UID3 782 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 SLC25A13Q9UJS0 675 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 VPS28Q9UK41 221 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 SARDHQ9UL12 918 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 FZD4Q9ULV1 537 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 MYO6Q9UM54 1294 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 SLC45A2Q9UMX9 530 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 SCML1Q9UN30 329 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 HS3ST2Q9Y278 367 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.22□□□□□ -1.73
VTI1B-203ENST00000554636 PAXBP1Q9Y5B6 917 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 CHD8Q9HCK8 2581 aa4.22□□□□□ -1.73
VTI1B-203ENST00000554636 TRPM6Q9BX84 2022 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 A0A1B0GVT2 93 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 A0A1W2PPC4 97 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 A0A1W2PR77 199 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 ILVBLA1L0T0 632 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 SYCE3A1L190 88 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 LRRC53A6NM62 1247 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 SIGLEC16A6NMB1 481 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 SMTNL1A8MU46 457 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 K7ERQ8 282 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 PLK4O00444 970 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 ALOX15BO15296 676 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 BCAT2O15382 392 aaPredicted RBP4.21□□□□□ -1.74
VTI1B-203ENST00000554636 SLC7A4O43246 635 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 SMAD6O43541 496 aaKnown RBP4.21□□□□□ -1.74
VTI1B-203ENST00000554636 PLRG1O43660 514 aaKnown RBP4.21□□□□□ -1.74
VTI1B-203ENST00000554636 RNASEH1O60930 286 aaKnown RBP4.21□□□□□ -1.74
VTI1B-203ENST00000554636 ZNF821O75541 412 aaPredicted RBP4.21□□□□□ -1.74
VTI1B-203ENST00000554636 CD160O95971 181 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 TOP3BO95985 862 aaKnown RBP4.21□□□□□ -1.74
VTI1B-203ENST00000554636 IL1BP01584 269 aa4.21□□□□□ -1.74
VTI1B-203ENST00000554636 WNT1P04628 370 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms