RNA–Protein interactions for RNA: ENST00000552713.5

CDK4-213, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 685 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-213ENST00000552713 RBM12BQ8IXT5 1001 aaKnown RBP8.27□□□□□ -1.09
CDK4-213ENST00000552713 SYTL1Q8IYJ3 562 aa8.27□□□□□ -1.09
CDK4-213ENST00000552713 TRAM1L1Q8N609 369 aa8.27□□□□□ -1.09
CDK4-213ENST00000552713 ST6GALNAC3Q8NDV1 305 aa8.27□□□□□ -1.09
CDK4-213ENST00000552713 NEK11Q8NG66 645 aa8.27□□□□□ -1.09
CDK4-213ENST00000552713 OR1L3Q8NH93 324 aa8.27□□□□□ -1.09
CDK4-213ENST00000552713 CCHCR1Q8TD31 782 aa8.27□□□□□ -1.09
CDK4-213ENST00000552713 BTBD6Q96KE9 485 aa8.27□□□□□ -1.09
CDK4-213ENST00000552713 NRTNQ99748 197 aa8.27□□□□□ -1.09
CDK4-213ENST00000552713 NUP85Q9BW27 656 aa8.27□□□□□ -1.09
CDK4-213ENST00000552713 ILKAPQ9H0C8 392 aaPredicted RBP8.27□□□□□ -1.09
CDK4-213ENST00000552713 CLSTN2Q9H4D0 955 aa8.27□□□□□ -1.09
CDK4-213ENST00000552713 PCMTD2Q9NV79 361 aa8.27□□□□□ -1.09
CDK4-213ENST00000552713 CHMP5Q9NZZ3 219 aa8.27□□□□□ -1.09
CDK4-213ENST00000552713 C5AR2Q9P296 337 aa8.27□□□□□ -1.09
CDK4-213ENST00000552713 RPL26L1Q9UNX3 145 aaKnown RBP8.27□□□□□ -1.09
CDK4-213ENST00000552713 OSGIN2Q9Y236 505 aa8.27□□□□□ -1.09
CDK4-213ENST00000552713 CFAP20Q9Y6A4 193 aaKnown RBP8.27□□□□□ -1.09
CDK4-213ENST00000552713 NCOA6Q14686 2063 aaPredicted RBP8.26□□□□□ -1.09
CDK4-213ENST00000552713 GTF3C1Q12789 2109 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 OR5K3A6NET4 321 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 SLC9B1P1A6NJY1 282 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 GPR89AB7ZAQ6 455 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 PRSS44E7EML9 344 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 AURKAO14965 403 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 MATN3O15232 486 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 GPR39O43194 453 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 KLF7O75840 302 aaPredicted RBP8.26□□□□□ -1.09
CDK4-213ENST00000552713 ZBTB11O95625 1053 aaPredicted RBP8.26□□□□□ -1.09
CDK4-213ENST00000552713 FTLP02792 175 aaPredicted RBP8.26□□□□□ -1.09
CDK4-213ENST00000552713 GPR89BP0CG08 455 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 ATP1A3P13637 1013 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 BPIP17213 487 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 OTX2P32243 289 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 SERPINB6P35237 376 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 ZNF165P49910 485 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 CTSCP53634 463 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 RRADP55042 308 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 GSDMDP57764 484 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 DCDC1P59894 354 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 SLC25A11Q02978 314 aaKnown RBP8.26□□□□□ -1.09
CDK4-213ENST00000552713 TMEM115Q12893 351 aaPredicted RBP8.26□□□□□ -1.09
CDK4-213ENST00000552713 SLC10A2Q12908 348 aaPredicted RBP8.26□□□□□ -1.09
CDK4-213ENST00000552713 NFE2L1Q14494 772 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 NAA30Q147X3 362 aaPredicted RBP8.26□□□□□ -1.09
CDK4-213ENST00000552713 PLCL1Q15111 1095 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 ATP13A5Q4VNC0 1218 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 ATP13A4Q4VNC1 1196 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 BOLA3Q53S33 107 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 ZNF385CQ66K41 422 aaPredicted RBP8.26□□□□□ -1.09
CDK4-213ENST00000552713 E4F1Q66K89 784 aaPredicted RBP8.26□□□□□ -1.09
CDK4-213ENST00000552713 NCBP2-AS2Q69YL0 99 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 Q6ZS92 163 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 TMC3Q7Z5M5 1100 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 MRGPREQ86SM8 312 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 CPNE8Q86YQ8 564 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 TRAPPC5Q8IUR0 188 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 CNTD1Q8N815 330 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 NAT14Q8WUY8 206 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 CPT1BQ92523 772 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 CLIP3Q96DZ5 547 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 SGSM3Q96HU1 749 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 TRIB3Q96RU7 358 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 ZSCAN5AQ9BUG6 496 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 ZFYVE1Q9HBF4 777 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 LATS2Q9NRM7 1088 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 FANCLQ9NW38 375 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 HRASLS2Q9NWW9 162 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 MYO1AQ9UBC5 1043 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 G3BP2Q9UN86 482 aaKnown RBP8.26□□□□□ -1.09
CDK4-213ENST00000552713 BTRCQ9Y297 605 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 ZFHX3Q15911 3703 aa8.26□□□□□ -1.09
CDK4-213ENST00000552713 CELSR1Q9NYQ6 3014 aa8.25□□□□□ -1.09
CDK4-213ENST00000552713 OR6C74A6NCV1 312 aa8.25□□□□□ -1.09
CDK4-213ENST00000552713 TMEM150CB9EJG8 249 aa8.25□□□□□ -1.09
CDK4-213ENST00000552713 DDX3XO00571 662 aaKnown RBP eCLIP8.25□□□□□ -1.09
CDK4-213ENST00000552713 LDB2O43679 373 aa8.25□□□□□ -1.09
CDK4-213ENST00000552713 VEGFDO43915 354 aa8.25□□□□□ -1.09
CDK4-213ENST00000552713 CNOT3O75175 753 aaKnown RBP8.25□□□□□ -1.09
CDK4-213ENST00000552713 ALOX12BO75342 701 aa8.25□□□□□ -1.09
CDK4-213ENST00000552713 SNRPB2P08579 225 aaKnown RBP8.25□□□□□ -1.09
CDK4-213ENST00000552713 FERP16591 822 aa8.25□□□□□ -1.09
CDK4-213ENST00000552713 CES1P23141 567 aa8.25□□□□□ -1.09
CDK4-213ENST00000552713 CCNCP24863 283 aa8.25□□□□□ -1.09
CDK4-213ENST00000552713 ANP32AP39687 249 aaKnown RBP8.25□□□□□ -1.09
CDK4-213ENST00000552713 ARSEP51690 589 aa8.25□□□□□ -1.09
CDK4-213ENST00000552713 UBE2HP62256 183 aa8.25□□□□□ -1.09
CDK4-213ENST00000552713 ZBTB17Q13105 803 aa8.25□□□□□ -1.09
CDK4-213ENST00000552713 MYBPC3Q14896 1274 aa8.25□□□□□ -1.09
CDK4-213ENST00000552713 NCF4Q15080 339 aa8.25□□□□□ -1.09
CDK4-213ENST00000552713 HIF1AQ16665 826 aa8.25□□□□□ -1.09
CDK4-213ENST00000552713 DCAF10Q5QP82 559 aa8.25□□□□□ -1.09
CDK4-213ENST00000552713 LYPLAL1Q5VWZ2 237 aa8.25□□□□□ -1.09
CDK4-213ENST00000552713 ZNF571Q7Z3V5 609 aaPredicted RBP8.25□□□□□ -1.09
CDK4-213ENST00000552713 FJX1Q86VR8 437 aa8.25□□□□□ -1.09
CDK4-213ENST00000552713 GALNT16Q8N428 558 aa8.25□□□□□ -1.09
CDK4-213ENST00000552713 RASGEF1AQ8N9B8 481 aa8.25□□□□□ -1.09
CDK4-213ENST00000552713 OR8K5Q8NH50 307 aa8.25□□□□□ -1.09
CDK4-213ENST00000552713 ENOX1Q8TC92 643 aaKnown RBP8.25□□□□□ -1.09
CDK4-213ENST00000552713 GRHL3Q8TE85 626 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms