RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 C9orf64Q5T6V5 341 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 TTC27Q6P3X3 843 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 CCDC137Q6PK04 289 aaKnown RBP5.77□□□□□ -1.49
SCAF11-213ENST00000550629 GSTA5Q7RTV2 222 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 CTAGE6Q86UF2 777 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 SFTPA1Q8IWL2 248 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 CTAGE4Q8IX94 777 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 KLHDC8BQ8IXV7 354 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 CMTM4Q8IZR5 234 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 ZNF567Q8N184 647 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 CCDC33Q8N5R6 958 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 CNTD1Q8N815 330 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 TMIEQ8NEW7 156 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 OR2AP1Q8NGE2 309 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 OR2A12Q8NGT7 310 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 USP7Q93009 1102 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 TADA1Q96BN2 335 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 LRRC45Q96CN5 670 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 IMP4Q96G21 291 aaKnown RBP5.77□□□□□ -1.49
SCAF11-213ENST00000550629 ZNF419Q96HQ0 510 aaPredicted RBP5.77□□□□□ -1.49
SCAF11-213ENST00000550629 ZNF641Q96N77 438 aaPredicted RBP5.77□□□□□ -1.49
SCAF11-213ENST00000550629 PLEKHG4BQ96PX9 1271 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 FCRL5Q96RD9 977 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 TMEM121Q9BTD3 319 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 SLC25A51Q9H1U9 297 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 RSPH9Q9H1X1 276 aaPredicted RBP5.77□□□□□ -1.49
SCAF11-213ENST00000550629 GBA3Q9H227 469 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 ATP13A3Q9H7F0 1226 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 LMAN1LQ9HAT1 526 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 GLOD4Q9HC38 313 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 PCDH9Q9HC56 1237 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 VPS45Q9NRW7 570 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 RBM12Q9NTZ6 932 aaKnown RBP5.77□□□□□ -1.49
SCAF11-213ENST00000550629 ING3Q9NXR8 418 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 SMARCAL1Q9NZC9 954 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 SEPT10Q9P0V9 454 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 PAK5Q9P286 719 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 KLHL8Q9P2G9 620 aaPredicted RBP5.77□□□□□ -1.49
SCAF11-213ENST00000550629 LHX3Q9UBR4 397 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 TMPRSS11EQ9UL52 423 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 SCML1Q9UN30 329 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 NDRG2Q9UN36 371 aaKnown RBP5.77□□□□□ -1.49
SCAF11-213ENST00000550629 RPL26L1Q9UNX3 145 aaKnown RBP5.77□□□□□ -1.49
SCAF11-213ENST00000550629 NEU2Q9Y3R4 380 aa5.77□□□□□ -1.49
SCAF11-213ENST00000550629 A0A1W2PQF6 199 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 KRTAP23-1A1A580 65 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 GOLGA6CA6NDK9 693 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 GOLGA6BA6NDN3 693 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 AP3B1O00203 1094 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 NEMP1O14524 444 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 INSIG1O15503 277 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 PSMD3O43242 534 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 KDM1AO60341 852 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 SEC24DO94855 1032 aaPredicted RBP5.76□□□□□ -1.49
SCAF11-213ENST00000550629 EPOP01588 193 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 HLA-DQB2P05538 268 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 SERPINF2P08697 491 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 CLEC2LP0C7M8 214 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 GOLGA6DP0CG33 693 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 HOXB2P14652 356 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 SERPINA4P29622 427 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 FDFT1P37268 417 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 MAGEA6P43360 314 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 ID4P47928 161 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 CCR3P51677 355 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 CCNHP51946 323 aaPredicted RBP5.76□□□□□ -1.49
SCAF11-213ENST00000550629 MANFP55145 182 aaKnown RBP5.76□□□□□ -1.49
SCAF11-213ENST00000550629 POLR2LP62875 67 aaKnown RBP5.76□□□□□ -1.49
SCAF11-213ENST00000550629 CDK16Q00536 496 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 ABHD18Q0P651 414 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 CCDC15Q0P6D6 951 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 PTK6Q13882 451 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 PRPSAP1Q14558 356 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 ANKRD20A2Q5SQ80 823 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 ANKRD20A1Q5TYW2 823 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 EMC10Q5UCC4 262 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 ANKRD20A3Q5VUR7 823 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 FAM46CQ5VWP2 391 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 ARMC3Q5W041 872 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 IGFL4Q6B9Z1 124 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 CCDC70Q6NSX1 233 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 BRAT1Q6PJG6 821 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 LEKR1Q6ZMV7 388 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 DPY19L3Q6ZPD9 716 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 Q6ZRM9 215 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 PID1Q7Z2X4 250 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 SRLQ86TD4 932 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 UNC5BQ8IZJ1 945 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 PGBD5Q8N414 524 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 MMGT1Q8N4V1 131 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 CAMKK1Q8N5S9 505 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 OR2T3Q8NH03 318 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 RPLP0P6Q8NHW5 317 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 ARRDC2Q8TBH0 407 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 GAB3Q8WWW8 586 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 OR8D1Q8WZ84 308 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 MIEF2Q96C03 454 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 PPP1R16AQ96I34 528 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 AGAP3Q96P47 875 aa5.76□□□□□ -1.49
SCAF11-213ENST00000550629 ACOX2Q99424 681 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms