RNA–Protein interactions for RNA: ENST00000550051.5

TRAFD1-207, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene TRAFD1, Length 1,003 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-207ENST00000550051 GPS2Q13227 327 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 GTF2H3Q13889 308 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 DNTTIP2Q5QJE6 756 aaKnown RBP9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 PLEKHS1Q5SXH7 462 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 ZDHHC20Q5W0Z9 365 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 ALKBH5Q6P6C2 394 aaKnown RBP9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 CERS6Q6ZMG9 384 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 MED25Q71SY5 747 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 MAMDC2Q7Z304 686 aaPredicted RBP9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 VSIG1Q86XK7 387 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 TRAPPC5Q8IUR0 188 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 RHOT1Q8IXI2 618 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 BEND7Q8N7W2 519 aaPredicted RBP9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 RBMXL3Q8N7X1 1067 aaKnown RBP9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 RASGEF1AQ8N9B8 481 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 TMEM102Q8N9M5 508 aaPredicted RBP9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 FDCSPQ8NFU4 85 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 MR1Q95460 341 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 ZNF830Q96NB3 372 aaPredicted RBP9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 AGAP3Q96P47 875 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 SMAD5Q99717 465 aaKnown RBP9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 NLNQ9BYT8 704 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 CHST8Q9H2A9 424 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 TRABDQ9H4I3 376 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 CBX8Q9HC52 389 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 SLAMF7Q9NQ25 335 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 HRASLS2Q9NWW9 162 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 C5AR2Q9P296 337 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 UVRAGQ9P2Y5 699 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 SPO11Q9Y5K1 396 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 SEC16AO15027 2179 aa9.62□□□□□ -0.87
TRAFD1-207ENST00000550051 SPTBP11277 2137 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 PRRC2CQ9Y520 2896 aaKnown RBP9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 UBA6A0AVT1 1052 aaPredicted RBP9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 KLHL33A6NCF5 533 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 TMEM63AO94886 807 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 CBX6O95503 412 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 CAPN1P07384 714 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 MTHFD1P11586 935 aaKnown RBP9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 RORAP35398 523 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 TYRO3Q06418 890 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 AP1B1Q10567 949 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 MRPL49Q13405 166 aaKnown RBP9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 PDK1Q15118 436 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 NFKBIBQ15653 356 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 TEX44Q53QW1 395 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 LDLRAP1Q5SW96 308 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 TMTC4Q5T4D3 741 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 SLC6A19Q695T7 634 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 SLC9A4Q6AI14 798 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 FAM83HQ6ZRV2 1179 aaPredicted RBP9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 CPNE8Q86YQ8 564 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 TMEM126BQ8IUX1 230 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 DSELQ8IZU8 1212 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 PLD5Q8N7P1 536 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 GPR150Q8NGU9 434 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 SPATA22Q8NHS9 363 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 PRR7Q8TB68 274 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 CPT1BQ92523 772 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 RAPGEF5Q92565 580 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 PNPLA2Q96AD5 504 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 SLC29A3Q9BZD2 475 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 ZCCHC2Q9C0B9 1178 aaKnown RBP9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 GLOD4Q9HC38 313 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 SYTL2Q9HCH5 934 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 BPIFA1Q9NP55 256 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 CASS4Q9NQ75 786 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 IL17CQ9P0M4 197 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 TMEM63CQ9P1W3 806 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 TCFL5Q9UL49 500 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 ACSL5Q9ULC5 683 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 NENFQ9UMX5 172 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 G3BP2Q9UN86 482 aaKnown RBP9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 BTRCQ9Y297 605 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 VPS9D1Q9Y2B5 631 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 HEY1Q9Y5J3 304 aa9.61□□□□□ -0.87
TRAFD1-207ENST00000550051 C3orf70A6NLC5 250 aaPredicted RBP9.6□□□□□ -0.87
TRAFD1-207ENST00000550051 UGT1A9O60656 530 aa9.6□□□□□ -0.87
TRAFD1-207ENST00000550051 MT-CYBP00156 380 aaPredicted RBP9.6□□□□□ -0.87
TRAFD1-207ENST00000550051 LDLRP01130 860 aa9.6□□□□□ -0.87
TRAFD1-207ENST00000550051 ZFXP17010 805 aaPredicted RBP9.6□□□□□ -0.87
TRAFD1-207ENST00000550051 UGT1A6P19224 532 aa9.6□□□□□ -0.87
TRAFD1-207ENST00000550051 UGT1A1P22309 533 aa9.6□□□□□ -0.87
TRAFD1-207ENST00000550051 UGT1A4P22310 534 aa9.6□□□□□ -0.87
TRAFD1-207ENST00000550051 VAV2P52735 878 aa9.6□□□□□ -0.87
TRAFD1-207ENST00000550051 CTSCP53634 463 aa9.6□□□□□ -0.87
TRAFD1-207ENST00000550051 RRADP55042 308 aa9.6□□□□□ -0.87
TRAFD1-207ENST00000550051 ITGA1P56199 1179 aa9.6□□□□□ -0.87
TRAFD1-207ENST00000550051 ZBED6P86452 979 aa9.6□□□□□ -0.87
TRAFD1-207ENST00000550051 NFE2L1Q14494 772 aa9.6□□□□□ -0.87
TRAFD1-207ENST00000550051 PLCL1Q15111 1095 aa9.6□□□□□ -0.87
TRAFD1-207ENST00000550051 GPR19Q15760 415 aa9.6□□□□□ -0.87
TRAFD1-207ENST00000550051 PCSK7Q16549 785 aa9.6□□□□□ -0.87
TRAFD1-207ENST00000550051 PLEKHN1Q494U1 663 aaPredicted RBP9.6□□□□□ -0.87
TRAFD1-207ENST00000550051 ANO6Q4KMQ2 910 aa9.6□□□□□ -0.87
TRAFD1-207ENST00000550051 PRR30Q53SZ7 412 aaPredicted RBP9.6□□□□□ -0.87
TRAFD1-207ENST00000550051 LCN10Q6JVE6 187 aa9.6□□□□□ -0.87
TRAFD1-207ENST00000550051 TMEM220Q6QAJ8 160 aa9.6□□□□□ -0.87
TRAFD1-207ENST00000550051 OOSP2Q86WS3 158 aa9.6□□□□□ -0.87
TRAFD1-207ENST00000550051 TICAM1Q8IUC6 712 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 213.8 ms