RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 ZNF189O75820 626 aaPredicted RBP15.99■□□□□ 0.15
VPS29-207ENST00000549970 FAM87AP0C7U9 286 aa15.99■□□□□ 0.15
VPS29-207ENST00000549970 MAP4P27816 1152 aaKnown RBP15.99■□□□□ 0.15
VPS29-207ENST00000549970 ZNF140P52738 457 aaPredicted RBP15.99■□□□□ 0.15
VPS29-207ENST00000549970 PPP1CAP62136 330 aa15.99■□□□□ 0.15
VPS29-207ENST00000549970 XIAPP98170 497 aa15.99■□□□□ 0.15
VPS29-207ENST00000549970 PDE1BQ01064 536 aa15.99■□□□□ 0.15
VPS29-207ENST00000549970 PLCL1Q15111 1095 aa15.99■□□□□ 0.15
VPS29-207ENST00000549970 CACHD1Q5VU97 1274 aa15.99■□□□□ 0.15
VPS29-207ENST00000549970 DENND5AQ6IQ26 1287 aa15.99■□□□□ 0.15
VPS29-207ENST00000549970 DUS1LQ6P1R4 473 aaKnown RBP15.99■□□□□ 0.15
VPS29-207ENST00000549970 PRSS42Q7Z5A4 293 aa15.99■□□□□ 0.15
VPS29-207ENST00000549970 UNC5BQ8IZJ1 945 aa15.99■□□□□ 0.15
VPS29-207ENST00000549970 LRRC45Q96CN5 670 aa15.99■□□□□ 0.15
VPS29-207ENST00000549970 DCUN1D1Q96GG9 259 aa15.99■□□□□ 0.15
VPS29-207ENST00000549970 ZDHHC12Q96GR4 267 aa15.99■□□□□ 0.15
VPS29-207ENST00000549970 OR6C1Q96RD1 312 aa15.99■□□□□ 0.15
VPS29-207ENST00000549970 SPRY4Q9C004 299 aa15.99■□□□□ 0.15
VPS29-207ENST00000549970 WWP1Q9H0M0 922 aa15.99■□□□□ 0.15
VPS29-207ENST00000549970 FAM96AQ9H5X1 160 aa15.99■□□□□ 0.15
VPS29-207ENST00000549970 GPN2Q9H9Y4 310 aaPredicted RBP15.99■□□□□ 0.15
VPS29-207ENST00000549970 IMPACTQ9P2X3 320 aa15.99■□□□□ 0.15
VPS29-207ENST00000549970 R3HDM2Q9Y2K5 976 aaKnown RBP15.99■□□□□ 0.15
VPS29-207ENST00000549970 TMEM184BQ9Y519 407 aaPredicted RBP15.99■□□□□ 0.15
VPS29-207ENST00000549970 CAPN6Q9Y6Q1 641 aa15.99■□□□□ 0.15
VPS29-207ENST00000549970 HELZ2Q9BYK8 2649 aaKnown RBP15.98■□□□□ 0.15
VPS29-207ENST00000549970 LOC101059948A0A1B0GTJ6 334 aa15.98■□□□□ 0.15
VPS29-207ENST00000549970 B8ZZF3 427 aa15.98■□□□□ 0.15
VPS29-207ENST00000549970 METTL18O95568 372 aa15.98■□□□□ 0.15
VPS29-207ENST00000549970 MTHFD1P11586 935 aaKnown RBP15.98■□□□□ 0.15
VPS29-207ENST00000549970 ITGALP20701 1170 aa15.98■□□□□ 0.15
VPS29-207ENST00000549970 CDC25BP30305 580 aa15.98■□□□□ 0.15
VPS29-207ENST00000549970 HADHAP40939 763 aa15.98■□□□□ 0.15
VPS29-207ENST00000549970 GDF10P55107 478 aa15.98■□□□□ 0.15
VPS29-207ENST00000549970 KLF1Q13351 362 aaPredicted RBP15.98■□□□□ 0.15
VPS29-207ENST00000549970 PARP6Q2NL67 630 aa15.98■□□□□ 0.15
VPS29-207ENST00000549970 METRNLQ641Q3 311 aa15.98■□□□□ 0.15
VPS29-207ENST00000549970 TAB3Q8N5C8 712 aaPredicted RBP15.98■□□□□ 0.15
VPS29-207ENST00000549970 OR2L2Q8NH16 312 aa15.98■□□□□ 0.15
VPS29-207ENST00000549970 KIAA1143Q96AT1 154 aaPredicted RBP15.98■□□□□ 0.15
VPS29-207ENST00000549970 ULK4Q96C45 1275 aa15.98■□□□□ 0.15
VPS29-207ENST00000549970 ELMO2Q96JJ3 720 aa15.98■□□□□ 0.15
VPS29-207ENST00000549970 DNAJC1Q96KC8 554 aaKnown RBP15.98■□□□□ 0.15
VPS29-207ENST00000549970 C12orf66Q96MD2 445 aa15.98■□□□□ 0.15
VPS29-207ENST00000549970 TMEM121Q9BTD3 319 aa15.98■□□□□ 0.15
VPS29-207ENST00000549970 EPHA6Q9UF33 1036 aa15.98■□□□□ 0.15
VPS29-207ENST00000549970 FEZ2Q9UHY8 353 aaPredicted RBP15.98■□□□□ 0.15
VPS29-207ENST00000549970 TCRBV7S2A1N4TA0A589 114 aa15.97■□□□□ 0.15
VPS29-207ENST00000549970 ZNF891A8MT65 544 aaPredicted RBP15.97■□□□□ 0.15
VPS29-207ENST00000549970 LDB2O43679 373 aa15.97■□□□□ 0.15
VPS29-207ENST00000549970 SGTAO43765 313 aa15.97■□□□□ 0.15
VPS29-207ENST00000549970 DLGAP3O95886 979 aa15.97■□□□□ 0.15
VPS29-207ENST00000549970 RALBP11234 206 aa15.97■□□□□ 0.15
VPS29-207ENST00000549970 TPH1P17752 444 aa15.97■□□□□ 0.15
VPS29-207ENST00000549970 MC4RP32245 332 aa15.97■□□□□ 0.15
VPS29-207ENST00000549970 NFATC3Q12968 1075 aa15.97■□□□□ 0.15
VPS29-207ENST00000549970 BCL7AQ4VC05 210 aa15.97■□□□□ 0.15
VPS29-207ENST00000549970 KCTD11Q693B1 232 aa15.97■□□□□ 0.15
VPS29-207ENST00000549970 MICALCLQ6ZW33 695 aa15.97■□□□□ 0.15
VPS29-207ENST00000549970 SNX20Q7Z614 316 aa15.97■□□□□ 0.15
VPS29-207ENST00000549970 KLHDC8BQ8IXV7 354 aa15.97■□□□□ 0.15
VPS29-207ENST00000549970 NXPE1Q8N323 547 aa15.97■□□□□ 0.15
VPS29-207ENST00000549970 SPDYE1Q8NFV5 336 aaPredicted RBP15.97■□□□□ 0.15
VPS29-207ENST00000549970 INSM2Q96T92 566 aaPredicted RBP15.97■□□□□ 0.15
VPS29-207ENST00000549970 ULBP3Q9BZM4 244 aa15.97■□□□□ 0.15
VPS29-207ENST00000549970 ARNT2Q9HBZ2 717 aa15.97■□□□□ 0.15
VPS29-207ENST00000549970 PIH1D1Q9NWS0 290 aaKnown RBP15.97■□□□□ 0.15
VPS29-207ENST00000549970 AGAP14A8MT82 685 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 CFAP99D6REC4 459 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 POLBP06746 335 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 SLC35G4P0C7Q5 338 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 PRKAR1AP10644 381 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 ZNF28P17035 718 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 PRLHRP49683 370 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 CDKN1CP49918 316 aaPredicted RBP15.96■□□□□ 0.15
VPS29-207ENST00000549970 ABHD18Q0P651 414 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 SEPT6Q14141 434 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 GSE1Q14687 1217 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 POU6F1Q14863 301 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 P3H1Q32P28 736 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 ZRANB3Q5FWF4 1079 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 KLHL35Q6PF15 583 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 XKR5Q6UX68 686 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 RASGRP3Q8IV61 690 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 CFAP206Q8IYR0 622 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 ESX1Q8N693 406 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 LILRA3Q8N6C8 439 aaPredicted RBP15.96■□□□□ 0.15
VPS29-207ENST00000549970 SLC35B2Q8TB61 432 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 KLHL6Q8WZ60 621 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 HES6Q96HZ4 224 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 SLC45A3Q96JT2 553 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 LINC00615Q96LM1 132 aaPredicted RBP15.96■□□□□ 0.15
VPS29-207ENST00000549970 RMDN2Q96LZ7 410 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 COPS8Q99627 209 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 RAB33BQ9H082 229 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 TRIT1Q9H3H1 467 aaKnown RBP15.96■□□□□ 0.15
VPS29-207ENST00000549970 LRRC40Q9H9A6 602 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 ACSL5Q9ULC5 683 aa15.96■□□□□ 0.15
VPS29-207ENST00000549970 IGHV5-51A0A0C4DH38 117 aa15.95■□□□□ 0.14
VPS29-207ENST00000549970 NKX2-8O15522 239 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms