RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 CGREF1Q99674 301 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 ALOXE3Q9BYJ1 711 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 KLHL25Q9H0H3 589 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 POPDC3Q9HBV1 291 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 POLE4Q9NR33 117 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 SMPD4Q9NXE4 827 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 MED16Q9Y2X0 877 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 XPNPEP2O43895 674 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 SOAT2O75908 522 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 GABARAPO95166 117 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 FSHRP23945 695 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 HTR7P34969 479 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 CRHR2Q13324 411 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 MAPK11Q15759 364 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 INAQ16352 499 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 ADPRMQ3LIE5 342 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 PAN2Q504Q3 1202 aaKnown RBP13.55□□□□□ -0.24
HDAC7-228ENST00000548938 SCML4Q8N228 414 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 PGBD5Q8N414 524 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 ARRDC2Q8TBH0 407 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 PSMG2Q969U7 264 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 FUBP1Q96AE4 644 aaKnown RBP13.55□□□□□ -0.24
HDAC7-228ENST00000548938 CCDC97Q96F63 343 aaPredicted RBP13.55□□□□□ -0.24
HDAC7-228ENST00000548938 CDK15Q96Q40 435 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 HGH1Q9BTY7 390 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 SMOC2Q9H3U7 446 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 MAGEE1Q9HCI5 957 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 GALPQ9UBC7 116 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 CASTOR2A6NHX0 329 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 ZNF99A8MXY4 864 aaPredicted RBP13.55□□□□□ -0.24
HDAC7-228ENST00000548938 OR4F21O95013 312 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 NADKO95544 446 aaPredicted RBP13.55□□□□□ -0.24
HDAC7-228ENST00000548938 PRKACGP22612 351 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 CTGFP29279 349 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 STC1P52823 247 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 ISL1P61371 349 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 ACVR1Q04771 509 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 IRF5Q13568 498 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 GALNT3Q14435 633 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 PIK3R6Q5UE93 754 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 TMEM236Q5W0B7 351 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 FAM126BQ8IXS8 530 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 CNIH3Q8TBE1 160 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 FAR1Q8WVX9 515 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 STARD8Q92502 1023 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 VMP1Q96GC9 406 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 ZNF583Q96ND8 569 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 ZIC5Q96T25 663 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 GAD1Q99259 594 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 DERL2Q9GZP9 239 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 ACTL8Q9H568 366 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 SP110Q9HB58 689 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 CATSPERZQ9NTU4 200 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 DNAJB9Q9UBS3 223 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 EIF2B4Q9UI10 523 aaKnown RBP13.55□□□□□ -0.24
HDAC7-228ENST00000548938 NAALAD2Q9Y3Q0 740 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 PMF1-BGLAPU3KQ54 211 aa13.55□□□□□ -0.24
HDAC7-228ENST00000548938 MBLAC1A4D2B0 266 aaPredicted RBP13.54□□□□□ -0.24
HDAC7-228ENST00000548938 BTN3A1O00481 513 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 HS6ST1O60243 411 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 NPPAP01160 153 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 ALOX5P09917 674 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 PABPC1P11940 636 aaKnown RBP13.54□□□□□ -0.24
HDAC7-228ENST00000548938 PCSK1P29120 753 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 FMO4P31512 558 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 EMX1Q04741 257 aaPredicted RBP13.54□□□□□ -0.24
HDAC7-228ENST00000548938 KCNJ8Q15842 424 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 PAGE2BQ5JRK9 111 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 Q6ZSR9 355 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 TMEM179BQ7Z7N9 219 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 FRS2Q8WU20 508 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 ITCHQ96J02 903 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 C17orf80Q9BSJ5 609 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 LIMD1Q9UGP4 676 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 M0R3G1 203 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 TREHO43280 583 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 DFNA5O60443 496 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 RPP40O75818 363 aaKnown RBP13.54□□□□□ -0.24
HDAC7-228ENST00000548938 IGHA2P01877 340 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 G6PDP11413 515 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 ZNF24P17028 368 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 HOXB8P17481 243 aaPredicted RBP13.54□□□□□ -0.24
HDAC7-228ENST00000548938 HTR6P50406 440 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 MAPRE1Q15691 268 aaKnown RBP13.54□□□□□ -0.24
HDAC7-228ENST00000548938 TIGD5Q53EQ6 642 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 GPRIN3Q6ZVF9 776 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 LRRC49Q8IUZ0 686 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 ZCCHC7Q8N3Z6 543 aaKnown RBP13.54□□□□□ -0.24
HDAC7-228ENST00000548938 PIK3C3Q8NEB9 887 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 OR52B6Q8NGF0 335 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 GPR150Q8NGU9 434 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 OR4L1Q8NH43 312 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 S100ZQ8WXG8 99 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 GLMNQ92990 594 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 MIOSQ9NXC5 875 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 VAPAQ9P0L0 249 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 FBXO10Q9UK96 956 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 INVSQ9Y283 1065 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 BRCA2P51587 3418 aa13.54□□□□□ -0.24
HDAC7-228ENST00000548938 LOC100130705A0A1B0GUX0 176 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms