RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 PRSS21Q9Y6M0 314 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 DOCK8Q8NF50 2099 aa13.23□□□□□ -0.29
PTCH1-215ENST00000547672 CHD9Q3L8U1 2897 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 C17orf113A0A1B0GUU1 675 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 LIN7AO14910 233 aaPredicted RBP13.22□□□□□ -0.29
PTCH1-215ENST00000547672 GYG2O15488 501 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 TM7SF2O76062 418 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 SLCO2B1O94956 709 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 ESRRBO95718 433 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 OTCP00480 354 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 UROSP10746 265 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 C6P13671 934 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 ITGB6P18564 788 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 MAP4P27816 1152 aaKnown RBP13.22□□□□□ -0.29
PTCH1-215ENST00000547672 ARRB2P32121 409 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 P2RY2P41231 377 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 SMAD4Q13485 552 aaKnown RBP13.22□□□□□ -0.29
PTCH1-215ENST00000547672 AGERQ15109 404 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 MAPRE2Q15555 327 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 POM121L1PQ3SYA9 428 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 BCL7AQ4VC05 210 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 SYTL3Q4VX76 610 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 LRRC73Q5JTD7 316 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 NXNQ6DKJ4 435 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 NEK5Q6P3R8 708 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 CYHR1Q6ZMK1 362 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 ELMO1Q92556 727 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 CHFRQ96EP1 664 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 MAELQ96JY0 434 aaKnown RBP13.22□□□□□ -0.29
PTCH1-215ENST00000547672 ZNF382Q96SR6 550 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 GABRG3Q99928 467 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 EGFL8Q99944 293 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 EBF4Q9BQW3 602 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 WRAP53Q9BUR4 548 aaKnown RBP13.22□□□□□ -0.29
PTCH1-215ENST00000547672 NUF2Q9BZD4 464 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 RIC8BQ9NVN3 520 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 CDH22Q9UJ99 828 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 PTBP2Q9UKA9 531 aaKnown RBP13.22□□□□□ -0.29
PTCH1-215ENST00000547672 MYO9BQ13459 2157 aa13.22□□□□□ -0.29
PTCH1-215ENST00000547672 TRANK1O15050 2925 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 ANKRD65E5RJM6 399 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 K7EQS6 105 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 MMP20O60882 483 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 CDK14O94921 469 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 DNTTP04053 509 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 ENO1P06733 434 aaKnown RBP13.21□□□□□ -0.29
PTCH1-215ENST00000547672 TARSP26639 723 aaKnown RBP13.21□□□□□ -0.29
PTCH1-215ENST00000547672 CCR7P32248 378 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 CTHP32929 405 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 KIR2DL1P43626 348 aaPredicted RBP13.21□□□□□ -0.29
PTCH1-215ENST00000547672 RPIAP49247 311 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 PRLHRP49683 370 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 RPS21P63220 83 aaKnown RBP13.21□□□□□ -0.29
PTCH1-215ENST00000547672 B4GALNT1Q00973 533 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 HSPA14Q0VDF9 509 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 MESP2Q0VG99 397 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 CNTN1Q12860 1018 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 SGCGQ13326 291 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 TUBB3Q13509 450 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 GBX1Q14549 363 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 RBBP7Q16576 425 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 TTC31Q49AM3 519 aaPredicted RBP13.21□□□□□ -0.29
PTCH1-215ENST00000547672 EOGTQ5NDL2 527 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 RAET1GQ6H3X3 334 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 KIAA1161Q6NSJ0 714 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 SBSNQ6UWP8 590 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 ADAMTSL4Q6UY14 1074 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 RFLNAQ6ZTI6 216 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 GPRIN3Q6ZVF9 776 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 KBTBD6Q86V97 674 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 HDDC3Q8N4P3 179 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 AGR3Q8TD06 166 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 TRPC4APQ8TEL6 797 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 GANCQ8TET4 914 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 UBTD2Q8WUN7 234 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 SKA2Q8WVK7 121 aaPredicted RBP13.21□□□□□ -0.29
PTCH1-215ENST00000547672 ASB11Q8WXH4 323 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 GLMNQ92990 594 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 ATP6V1E2Q96A05 226 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 MCUR1Q96AQ8 359 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 PTCD3Q96EY7 689 aaKnown RBP13.21□□□□□ -0.29
PTCH1-215ENST00000547672 HIC2Q96JB3 615 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 CD244Q9BZW8 370 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 ARL8BQ9NVJ2 186 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 TMEM45AQ9NWC5 275 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 OPTCQ9UBM4 332 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 PCTPQ9UKL6 214 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 CEP290O15078 2479 aa13.21□□□□□ -0.29
PTCH1-215ENST00000547672 DENND4AQ7Z401 1863 aa13.21□□□□□ -0.3
PTCH1-215ENST00000547672 GFYI3L273 518 aa13.2□□□□□ -0.3
PTCH1-215ENST00000547672 GPR39O43194 453 aa13.2□□□□□ -0.3
PTCH1-215ENST00000547672 PCDH8O95206 1070 aa13.2□□□□□ -0.3
PTCH1-215ENST00000547672 CATP04040 527 aaKnown RBP13.2□□□□□ -0.3
PTCH1-215ENST00000547672 T-ENOLP0DO92 83 aa13.2□□□□□ -0.3
PTCH1-215ENST00000547672 TIE1P35590 1138 aa13.2□□□□□ -0.3
PTCH1-215ENST00000547672 GGT5P36269 586 aa13.2□□□□□ -0.3
PTCH1-215ENST00000547672 ATP4BP51164 291 aa13.2□□□□□ -0.3
PTCH1-215ENST00000547672 COPAP53621 1224 aa13.2□□□□□ -0.3
PTCH1-215ENST00000547672 STX1BP61266 288 aa13.2□□□□□ -0.3
PTCH1-215ENST00000547672 SH3BP2P78314 561 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms