RNA–Protein interactions for RNA: ENST00000544093.5

CHFR-222, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 942 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-222ENST00000544093 FGF3P11487 239 aaPredicted RBP22.79■■□□□ 1.24
CHFR-222ENST00000544093 CCL4P13236 92 aa22.79■■□□□ 1.24
CHFR-222ENST00000544093 ADRA1DP25100 572 aa22.79■■□□□ 1.24
CHFR-222ENST00000544093 MPSTP25325 297 aa22.79■■□□□ 1.24
CHFR-222ENST00000544093 PBLDP30039 288 aaPredicted RBP22.79■■□□□ 1.24
CHFR-222ENST00000544093 CLN3Q13286 438 aa22.79■■□□□ 1.24
CHFR-222ENST00000544093 GPR18Q14330 331 aa22.79■■□□□ 1.24
CHFR-222ENST00000544093 KLHL35Q6PF15 583 aa22.79■■□□□ 1.24
CHFR-222ENST00000544093 ANP32BQ92688 251 aaKnown RBP22.79■■□□□ 1.24
CHFR-222ENST00000544093 TBRG4Q969Z0 631 aaKnown RBP eCLIP22.79■■□□□ 1.24
CHFR-222ENST00000544093 TEFMQ96QE5 360 aaKnown RBP22.79■■□□□ 1.24
CHFR-222ENST00000544093 CCM2Q9BSQ5 444 aa22.79■■□□□ 1.24
CHFR-222ENST00000544093 PIH1D1Q9NWS0 290 aaKnown RBP22.79■■□□□ 1.24
CHFR-222ENST00000544093 PCDHB11Q9Y5F2 797 aa22.79■■□□□ 1.24
CHFR-222ENST00000544093 C9orf172C9J069 976 aa22.78■■□□□ 1.24
CHFR-222ENST00000544093 QSOX1O00391 747 aa22.78■■□□□ 1.24
CHFR-222ENST00000544093 AP2A2O94973 939 aa22.78■■□□□ 1.24
CHFR-222ENST00000544093 C9P02748 559 aa22.78■■□□□ 1.24
CHFR-222ENST00000544093 SLC35G4P0C7Q5 338 aa22.78■■□□□ 1.24
CHFR-222ENST00000544093 CAPZBP47756 277 aa22.78■■□□□ 1.24
CHFR-222ENST00000544093 CXADRP78310 365 aa22.78■■□□□ 1.24
CHFR-222ENST00000544093 RPE65Q16518 533 aa22.78■■□□□ 1.24
CHFR-222ENST00000544093 ZNF449Q6P9G9 518 aa22.78■■□□□ 1.24
CHFR-222ENST00000544093 FAM83HQ6ZRV2 1179 aaPredicted RBP22.78■■□□□ 1.24
CHFR-222ENST00000544093 TAS2R42Q7RTR8 314 aa22.78■■□□□ 1.24
CHFR-222ENST00000544093 SERPINA9Q86WD7 417 aa22.78■■□□□ 1.24
CHFR-222ENST00000544093 HM13Q8TCT9 377 aa22.78■■□□□ 1.24
CHFR-222ENST00000544093 ZDHHC12Q96GR4 267 aa22.78■■□□□ 1.24
CHFR-222ENST00000544093 NAP1L3Q99457 506 aaPredicted RBP22.78■■□□□ 1.24
CHFR-222ENST00000544093 TTC1Q99614 292 aa22.78■■□□□ 1.24
CHFR-222ENST00000544093 RAB33BQ9H082 229 aa22.78■■□□□ 1.24
CHFR-222ENST00000544093 FAM96AQ9H5X1 160 aa22.78■■□□□ 1.24
CHFR-222ENST00000544093 CASS4Q9NQ75 786 aa22.78■■□□□ 1.24
CHFR-222ENST00000544093 SLC39A1Q9NY26 324 aa22.78■■□□□ 1.24
CHFR-222ENST00000544093 STMND1H3BQB6 276 aa22.77■■□□□ 1.24
CHFR-222ENST00000544093 AGRPO00253 132 aa22.77■■□□□ 1.24
CHFR-222ENST00000544093 CCL22O00626 93 aa22.77■■□□□ 1.24
CHFR-222ENST00000544093 SGTAO43765 313 aa22.77■■□□□ 1.24
CHFR-222ENST00000544093 MTHFD1P11586 935 aaKnown RBP22.77■■□□□ 1.24
CHFR-222ENST00000544093 ETS1P14921 441 aa22.77■■□□□ 1.24
CHFR-222ENST00000544093 CXCR5P32302 372 aa22.77■■□□□ 1.24
CHFR-222ENST00000544093 RPL22P35268 128 aaKnown RBP22.77■■□□□ 1.24
CHFR-222ENST00000544093 ITIH4Q14624 930 aa22.77■■□□□ 1.24
CHFR-222ENST00000544093 SNAP47Q5SQN1 464 aa22.77■■□□□ 1.24
CHFR-222ENST00000544093 DCAF12Q5T6F0 453 aa22.77■■□□□ 1.24
CHFR-222ENST00000544093 LYPLAL1Q5VWZ2 237 aa22.77■■□□□ 1.24
CHFR-222ENST00000544093 FAM129CQ86XR2 697 aa22.77■■□□□ 1.24
CHFR-222ENST00000544093 SNRNP27Q8WVK2 155 aaKnown RBP22.77■■□□□ 1.24
CHFR-222ENST00000544093 CRELD1Q96HD1 420 aa22.77■■□□□ 1.24
CHFR-222ENST00000544093 PBKQ96KB5 322 aa22.77■■□□□ 1.24
CHFR-222ENST00000544093 UBL7Q96S82 380 aaPredicted RBP22.77■■□□□ 1.24
CHFR-222ENST00000544093 CCNL2Q96S94 520 aaPredicted RBP22.77■■□□□ 1.24
CHFR-222ENST00000544093 ZPBPQ9BS86 351 aa22.77■■□□□ 1.24
CHFR-222ENST00000544093 EPHA6Q9UF33 1036 aa22.77■■□□□ 1.24
CHFR-222ENST00000544093 PSMD13Q9UNM6 376 aa22.77■■□□□ 1.24
CHFR-222ENST00000544093 HEBP2Q9Y5Z4 205 aa22.77■■□□□ 1.24
CHFR-222ENST00000544093 CACNA1GO43497 2377 aa22.76■■□□□ 1.23
CHFR-222ENST00000544093 LOC400499M0QZD8 3231 aa22.76■■□□□ 1.23
CHFR-222ENST00000544093 EFCAB7A8K855 629 aa22.76■■□□□ 1.23
CHFR-222ENST00000544093 F8W8V4 182 aa22.76■■□□□ 1.23
CHFR-222ENST00000544093 TYRP1P17643 537 aa22.76■■□□□ 1.23
CHFR-222ENST00000544093 NDUFS1P28331 727 aa22.76■■□□□ 1.23
CHFR-222ENST00000544093 NSG1P42857 185 aa22.76■■□□□ 1.23
CHFR-222ENST00000544093 VAC14Q08AM6 782 aa22.76■■□□□ 1.23
CHFR-222ENST00000544093 CCDC81Q6ZN84 652 aa22.76■■□□□ 1.23
CHFR-222ENST00000544093 CFAP206Q8IYR0 622 aa22.76■■□□□ 1.23
CHFR-222ENST00000544093 BMPERQ8N8U9 685 aa22.76■■□□□ 1.23
CHFR-222ENST00000544093 ART4Q93070 314 aa22.76■■□□□ 1.23
CHFR-222ENST00000544093 C9orf72Q96LT7 481 aa22.76■■□□□ 1.23
CHFR-222ENST00000544093 WWP1Q9H0M0 922 aa22.76■■□□□ 1.23
CHFR-222ENST00000544093 FBXO8Q9NRD0 319 aa22.76■■□□□ 1.23
CHFR-222ENST00000544093 IMP3Q9NV31 184 aaKnown RBP22.76■■□□□ 1.23
CHFR-222ENST00000544093 OGFRQ9NZT2 677 aa22.76■■□□□ 1.23
CHFR-222ENST00000544093 FOXJ2Q9P0K8 574 aa22.76■■□□□ 1.23
CHFR-222ENST00000544093 RALYQ9UKM9 306 aaKnown RBP22.76■■□□□ 1.23
CHFR-222ENST00000544093 COLEC10Q9Y6Z7 277 aa22.76■■□□□ 1.23
CHFR-222ENST00000544093 PIKFYVEQ9Y2I7 2098 aa22.76■■□□□ 1.23
CHFR-222ENST00000544093 A8MU76 341 aa22.75■■□□□ 1.23
CHFR-222ENST00000544093 CAPN5O15484 640 aaPredicted RBP22.75■■□□□ 1.23
CHFR-222ENST00000544093 PPARGP37231 505 aaPredicted RBP22.75■■□□□ 1.23
CHFR-222ENST00000544093 BASP1P80723 227 aaKnown RBP22.75■■□□□ 1.23
CHFR-222ENST00000544093 CDK16Q00536 496 aa22.75■■□□□ 1.23
CHFR-222ENST00000544093 MC2RQ01718 297 aa22.75■■□□□ 1.23
CHFR-222ENST00000544093 RPA4Q13156 261 aa22.75■■□□□ 1.23
CHFR-222ENST00000544093 CCDC38Q502W7 563 aa22.75■■□□□ 1.23
CHFR-222ENST00000544093 TSTD2Q5T7W7 516 aa22.75■■□□□ 1.23
CHFR-222ENST00000544093 CYB5D1Q6P9G0 228 aa22.75■■□□□ 1.23
CHFR-222ENST00000544093 AFTPHQ6ULP2 937 aa22.75■■□□□ 1.23
CHFR-222ENST00000544093 PACS1Q6VY07 963 aa22.75■■□□□ 1.23
CHFR-222ENST00000544093 CERS6Q6ZMG9 384 aa22.75■■□□□ 1.23
CHFR-222ENST00000544093 GLIS1Q8NBF1 620 aa22.75■■□□□ 1.23
CHFR-222ENST00000544093 PPHLN1Q8NEY8 458 aaKnown RBP22.75■■□□□ 1.23
CHFR-222ENST00000544093 OR13J1Q8NGT2 312 aa22.75■■□□□ 1.23
CHFR-222ENST00000544093 C12orf66Q96MD2 445 aa22.75■■□□□ 1.23
CHFR-222ENST00000544093 OCIAD1Q9NX40 245 aa22.75■■□□□ 1.23
CHFR-222ENST00000544093 KLHL3Q9UH77 587 aa22.75■■□□□ 1.23
CHFR-222ENST00000544093 TTC7AQ9ULT0 858 aaPredicted RBP22.75■■□□□ 1.23
CHFR-222ENST00000544093 ZSCAN5DPP0CG00 497 aa22.74■■□□□ 1.23
CHFR-222ENST00000544093 CDKN1CP49918 316 aaPredicted RBP22.74■■□□□ 1.23
CHFR-222ENST00000544093 ACVR1Q04771 509 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms