RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 MGAT4DA6NG13 374 aa15.3■□□□□ 0.04
VPS33A-206ENST00000542310 BUD23O43709 281 aaKnown RBP15.3■□□□□ 0.04
VPS33A-206ENST00000542310 MTHFD1P11586 935 aaKnown RBP15.3■□□□□ 0.04
VPS33A-206ENST00000542310 FGF5P12034 268 aa15.3■□□□□ 0.04
VPS33A-206ENST00000542310 NELFEP18615 380 aaKnown RBP15.3■□□□□ 0.04
VPS33A-206ENST00000542310 CA5AP35218 305 aa15.3■□□□□ 0.04
VPS33A-206ENST00000542310 HADHAP40939 763 aa15.3■□□□□ 0.04
VPS33A-206ENST00000542310 ZNF140P52738 457 aaPredicted RBP15.3■□□□□ 0.04
VPS33A-206ENST00000542310 FOXM1Q08050 763 aa15.3■□□□□ 0.04
VPS33A-206ENST00000542310 MSLNQ13421 630 aaPredicted RBP15.3■□□□□ 0.04
VPS33A-206ENST00000542310 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.3■□□□□ 0.04
VPS33A-206ENST00000542310 CACHD1Q5VU97 1274 aa15.3■□□□□ 0.04
VPS33A-206ENST00000542310 DARS2Q6PI48 645 aaKnown RBP15.3■□□□□ 0.04
VPS33A-206ENST00000542310 RAD9BQ6WBX8 426 aa15.3■□□□□ 0.04
VPS33A-206ENST00000542310 FAM83HQ6ZRV2 1179 aaPredicted RBP15.3■□□□□ 0.04
VPS33A-206ENST00000542310 KMT5CQ86Y97 462 aa15.3■□□□□ 0.04
VPS33A-206ENST00000542310 CARFQ8N187 725 aa15.3■□□□□ 0.04
VPS33A-206ENST00000542310 TTC13Q8NBP0 860 aa15.3■□□□□ 0.04
VPS33A-206ENST00000542310 OR4K2Q8NGD2 314 aa15.3■□□□□ 0.04
VPS33A-206ENST00000542310 OR2L2Q8NH16 312 aa15.3■□□□□ 0.04
VPS33A-206ENST00000542310 HEXDCQ8WVB3 486 aa15.3■□□□□ 0.04
VPS33A-206ENST00000542310 ALG3Q92685 438 aa15.3■□□□□ 0.04
VPS33A-206ENST00000542310 TBL1YQ9BQ87 522 aa15.3■□□□□ 0.04
VPS33A-206ENST00000542310 LACRTQ9GZZ8 138 aa15.3■□□□□ 0.04
VPS33A-206ENST00000542310 SLC25A18Q9H1K4 315 aa15.3■□□□□ 0.04
VPS33A-206ENST00000542310 C10orf88Q9H8K7 445 aa15.3■□□□□ 0.04
VPS33A-206ENST00000542310 TRIM10Q9UDY6 481 aa15.3■□□□□ 0.04
VPS33A-206ENST00000542310 FKBPLQ9UIM3 349 aa15.3■□□□□ 0.04
VPS33A-206ENST00000542310 ACSL5Q9ULC5 683 aa15.3■□□□□ 0.04
VPS33A-206ENST00000542310 GOLGA6L9A6NEM1 432 aa15.29■□□□□ 0.04
VPS33A-206ENST00000542310 MIF4GDA9UHW6 222 aaKnown RBP15.29■□□□□ 0.04
VPS33A-206ENST00000542310 RALBP11234 206 aa15.29■□□□□ 0.04
VPS33A-206ENST00000542310 ITGALP20701 1170 aa15.29■□□□□ 0.04
VPS33A-206ENST00000542310 CCR10P46092 362 aa15.29■□□□□ 0.04
VPS33A-206ENST00000542310 PRLHRP49683 370 aa15.29■□□□□ 0.04
VPS33A-206ENST00000542310 SEPHS1P49903 392 aa15.29■□□□□ 0.04
VPS33A-206ENST00000542310 POLE2P56282 527 aa15.29■□□□□ 0.04
VPS33A-206ENST00000542310 XIAPP98170 497 aa15.29■□□□□ 0.04
VPS33A-206ENST00000542310 PLCL1Q15111 1095 aa15.29■□□□□ 0.04
VPS33A-206ENST00000542310 FNBP1LQ5T0N5 605 aa15.29■□□□□ 0.04
VPS33A-206ENST00000542310 IRGCQ6NXR0 463 aa15.29■□□□□ 0.04
VPS33A-206ENST00000542310 PRICKLE2Q7Z3G6 844 aa15.29■□□□□ 0.04
VPS33A-206ENST00000542310 SYCE1Q8N0S2 351 aa15.29■□□□□ 0.04
VPS33A-206ENST00000542310 UBL4BQ8N7F7 174 aa15.29■□□□□ 0.04
VPS33A-206ENST00000542310 ACRBPQ8NEB7 543 aa15.29■□□□□ 0.04
VPS33A-206ENST00000542310 CCDC110Q8TBZ0 833 aa15.29■□□□□ 0.04
VPS33A-206ENST00000542310 HM13Q8TCT9 377 aa15.29■□□□□ 0.04
VPS33A-206ENST00000542310 STARD8Q92502 1023 aa15.29■□□□□ 0.04
VPS33A-206ENST00000542310 SLC41A2Q96JW4 573 aa15.29■□□□□ 0.04
VPS33A-206ENST00000542310 OR6C1Q96RD1 312 aa15.29■□□□□ 0.04
VPS33A-206ENST00000542310 ASB8Q9H765 288 aa15.29■□□□□ 0.04
VPS33A-206ENST00000542310 RPS6KL1Q9Y6S9 549 aa15.29■□□□□ 0.04
VPS33A-206ENST00000542310 DUSP10Q9Y6W6 482 aa15.29■□□□□ 0.04
VPS33A-206ENST00000542310 ASH1LQ9NR48 2969 aaKnown RBP15.28■□□□□ 0.04
VPS33A-206ENST00000542310 TENM4Q6N022 2769 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 OR5K3A6NET4 321 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 TLCD2A6NGC4 264 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 CFAP99D6REC4 459 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 H7C0S8 307 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 MT-ND3P03897 115 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 SLC35G4P0C7Q5 338 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 PBLDP30039 288 aaPredicted RBP15.28■□□□□ 0.04
VPS33A-206ENST00000542310 SH3BP2P78314 561 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 KCNAB2Q13303 367 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 PTPRCAPQ14761 206 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 P3H1Q32P28 736 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 DENND5AQ6IQ26 1287 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 C6orf15Q6UXA7 325 aaPredicted RBP15.28■□□□□ 0.04
VPS33A-206ENST00000542310 FAM92BQ6ZTR7 304 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 SNX20Q7Z614 316 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 KIAA1328Q86T90 577 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 BPHLQ86WA6 291 aaPredicted RBP15.28■□□□□ 0.04
VPS33A-206ENST00000542310 OOSP2Q86WS3 158 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 PPP1R3BQ86XI6 285 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 RASGRP3Q8IV61 690 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 NXPE1Q8N323 547 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 STAMBPL1Q96FJ0 436 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 DCUN1D1Q96GG9 259 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 FCRL4Q96PJ5 515 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 APOL2Q9BQE5 337 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 RBSNQ9H1K0 784 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 KIR3DX1Q9H7L2 352 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 PDE7BQ9NP56 450 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 IMP3Q9NV31 184 aaKnown RBP15.28■□□□□ 0.04
VPS33A-206ENST00000542310 CRLS1Q9UJA2 301 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 AMFRQ9UKV5 643 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 PSMD13Q9UNM6 376 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 HEBP2Q9Y5Z4 205 aa15.28■□□□□ 0.04
VPS33A-206ENST00000542310 IGLV3-16A0A075B6K0 115 aa15.27■□□□□ 0.04
VPS33A-206ENST00000542310 TERTO14746 1132 aaKnown RBP15.27■□□□□ 0.04
VPS33A-206ENST00000542310 SGTAO43765 313 aa15.27■□□□□ 0.04
VPS33A-206ENST00000542310 KIF1CO43896 1103 aaKnown RBP15.27■□□□□ 0.04
VPS33A-206ENST00000542310 ZNF28P17035 718 aa15.27■□□□□ 0.04
VPS33A-206ENST00000542310 NDUFS1P28331 727 aa15.27■□□□□ 0.04
VPS33A-206ENST00000542310 ACY1Q03154 408 aa15.27■□□□□ 0.04
VPS33A-206ENST00000542310 KLF1Q13351 362 aaPredicted RBP15.27■□□□□ 0.04
VPS33A-206ENST00000542310 OLIG2Q13516 323 aa15.27■□□□□ 0.04
VPS33A-206ENST00000542310 GPR33Q49SQ1 333 aa15.27■□□□□ 0.04
VPS33A-206ENST00000542310 DNTTIP2Q5QJE6 756 aaKnown RBP15.27■□□□□ 0.04
VPS33A-206ENST00000542310 KCTD11Q693B1 232 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms